Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30329
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0974 + 21969713-21971914                                         32   0.33 
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051...    32   0.44 
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975...    30   1.3  
11_05_0091 - 18982390-18982948,18983088-18983173                       29   4.1  
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923...    28   5.4  
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           28   7.1  
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152...    28   7.1  
01_06_0052 - 25994156-25994485,25996861-25996878,25997668-25997880     27   9.4  

>10_08_0974 + 21969713-21971914
          Length = 733

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 578 WRSKFPPFSTRAAPPT*TQSPFMCHLSPWL 489
           W S F P  T AAPP  + SPF+  L  W+
Sbjct: 76  WVSSFRPQPTAAAPPPPSLSPFLSRLELWV 105


>12_02_0633 +
           21402847-21402862,21403143-21404975,21405052-21405170,
           21405288-21405722
          Length = 800

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 63  KNFLINHKSEQKLKMSPDINQIGTQK-VRNVSSGEVLELKSFWEQQNVAIVFF 218
           K+ L N K   +L  S ++ Q+G  K  +   + +V+  ++FW+  N+A+ +F
Sbjct: 427 KSLLDNKKELVRLFKSDEMEQLGYLKQAKGKKASKVIRSETFWKNVNIAVNYF 479


>03_02_0602 +
           9759055-9759223,9759305-9759455,9759548-9759593,
           9759974-9760033,9760519-9760555,9761268-9761347,
           9761413-9761516,9761613-9761673,9762962-9763019,
           9763866-9763918,9764357-9765320,9766131-9766185,
           9767223-9768786
          Length = 1133

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 156 SGEVLELKSFWEQQNVAIVFFRRWGCMFCR 245
           SG+ + +   W+ +   + F R +GC+ CR
Sbjct: 83  SGKAVPVVDLWKDRKAIVAFARHFGCVLCR 112


>11_05_0091 - 18982390-18982948,18983088-18983173
          Length = 214

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 372 RSPSKNFPSLNSLDPASS-TPTPTSLMLCCLRIGAISLNS*PKAYKTCNPSDERI 211
           RSPS   P   SL P+ S +PTP S   CCL  G ++ NS   +     P+  R+
Sbjct: 121 RSPSSRSPL--SLQPSPSPSPTPDSATPCCL-TGRLADNSTLNSDTPGTPAQRRL 172


>02_02_0348 -
           9233032-9233154,9233233-9233311,9233387-9233511,
           9233597-9233734,9233802-9233993,9235269-9237209
          Length = 865

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +1

Query: 373 VLRREHFNLSTVGF*KVQYFNYFNFAAMEAIT*RDFERKSHGLKWHMKGD 522
           V+ R H      GF     +NYF     + I   D ER     +W  K D
Sbjct: 143 VMERHHSGFDATGFVSRDLYNYFTRLRKKHILGGDAERVIKYFQWRQKHD 192


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 279 FSSSTTSNLSGLASKRPDPRSSAKESFS 362
           F  S T++ SGL S +PDP SS   + S
Sbjct: 749 FVPSLTADTSGLQSSQPDPNSSLMNNSS 776


>02_04_0532 +
           23711530-23711755,23712984-23713093,23713204-23715298,
           23716092-23716153,23716236-23716277,23716614-23716673,
           23716873-23717010,23717333-23717374,23717452-23717574
          Length = 965

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +1

Query: 373 VLRREHFNLSTVGF*KVQYFNYFNFAAMEAIT*RDFERKSHGLKWHMKGD 522
           V+ R H      GF     +NYF     + I   D ER     +W  K D
Sbjct: 278 VMERHHGGFDATGFVSRDLYNYFTRLRKKHILGGDAERVIKYFQWRQKHD 327


>01_06_0052 - 25994156-25994485,25996861-25996878,25997668-25997880
          Length = 186

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -2

Query: 534 HLNPISLHVPLKPMAFPFEIASRDCFHSSEVKIVKILNLLKPNC 403
           H+  + L V +KP A P ++ SR CFHS   +  K  N  K  C
Sbjct: 133 HVGELELAVEMKP-ARPEDV-SRACFHSCAARSGKFGNPCKRFC 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,661,006
Number of Sequences: 37544
Number of extensions: 363895
Number of successful extensions: 950
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)