Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30329
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 4.8
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 4.8
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 4.8
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 4.8
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 28 4.8
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 6.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 27 8.4
Z77662-2|CAB01200.1| 181|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical
protein C27A7.4 protein.
Length = 1403
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +1
Query: 499 LKWHMKGDWVQVG----GAALVEKGGNLLRHFVQTGP 597
++WH K +V VG G + KGGN+ V+T P
Sbjct: 52 VRWHPKKQFVVVGWKDGGVCFIPKGGNVSHTVVETYP 88
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 364 IEKLSFAELLGSGLFDANPDKF 299
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = -2
Query: 612 RQMIRRSGLHKMAEQVPALFYQSGATHLNPISLHVPLKPMAFPFEIASRDCFHSSEVKIV 433
R+ R + +++ +P ++S A N ISL + L + P + A + H+ VK+
Sbjct: 71 RRFNRAASAKTLSDSLPN--FKSLARLANGISLEIGLIDGSIPSDDAIAELLHTGPVKLQ 128
Query: 432 KILNL 418
+++NL
Sbjct: 129 EVINL 133
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 369 SPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISLNS*PKAYKTCNP 226
SPS S +SL SS+P P+S+ L I + S +S P A + P
Sbjct: 18 SPSTAVTSPSSLG-TSSSPLPSSISTSALPIASSSASSSPSAASSTTP 64
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 369 SPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISLNS*PKAYKTCNP 226
SPS S +SL SS+P P+S+ L I + S +S P A + P
Sbjct: 225 SPSTAVTSPSSLG-TSSSPLPSSISTSALPIASSSASSSPSAASSTTP 271
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 369 SPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISLNS*PKAYKTCNP 226
SPS S +SL SS+P P+S+ L I + S +S P A + P
Sbjct: 225 SPSTAVTSPSSLG-TSSSPLPSSISTSALPIASSSASSSPSAASSTTP 271
>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
protein F26D2.10 protein.
Length = 1213
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -3
Query: 260 TLSPKPTKHATPATKEYNSHILLL--PEALQF*NFATGNVSHFLRADLINIRRHFKFLFA 87
TL K K +T N+ +LLL P+AL N T S + DL N+R+H +FL++
Sbjct: 610 TLVEKEIKSSTSHVNSTNNPVLLLKTPQAL-IKNIGT---STRVLEDLENVRQHRQFLYS 665
>Z77662-2|CAB01200.1| 181|Caenorhabditis elegans Hypothetical
protein F47B8.2 protein.
Length = 181
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 388 VLDVIQISIEKLSFAELLGSGLFDANPDKFDV 293
VL V+Q I + FA SGL D N F+V
Sbjct: 86 VLAVLQFMIWPVMFASFTASGLADTNKTMFEV 117
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -2
Query: 621 LQIRQMIRRSGLHKMAEQVPALFYQSGATHLNPISLHVPLKPMAFPFEIASRDCFHSSEV 442
L++++ R++ H E+ P QS + H NP+ + F + D FH +
Sbjct: 182 LEMKRKSRKNKKHNFEEKQPNQSIQSTSHHYNPVVTENTKNYIQFDTVFENLDTFHPFDS 241
Query: 441 KI 436
I
Sbjct: 242 NI 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,083,349
Number of Sequences: 27780
Number of extensions: 310919
Number of successful extensions: 928
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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