Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30328
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.25 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   5.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 176 SRKQWRSC*QETSLMLMKPRKWVLSVSIPSGK 271
           S K++ +   E    + KPR WVL++++P+ +
Sbjct: 310 SDKEYLNLFLEELSEIFKPRGWVLTIAVPASR 341


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 70  RTALPAHNHPQE 35
           RT LP H HPQ+
Sbjct: 374 RTNLPTHRHPQD 385


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 206 PVNTISIAFDLPTYLGRRWVPPAPGMVP 123
           P++T S+  D   +     +PP PG+ P
Sbjct: 211 PISTSSLPSDFYRFSPTGLIPPHPGLSP 238


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 206 PVNTISIAFDLPTYLGRRWVPPAPGMVP 123
           P++T S+  D   +     +PP PG+ P
Sbjct: 103 PISTSSLPSDFYRFSPTGLIPPHPGLSP 130


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +1

Query: 121 IGTIPGAGGTQ--RLPRYVGKSKAMEIVLTGNFFDAHEAE 234
           +GT+ GAGGT    +   V  S  + IV  G F +   A+
Sbjct: 287 VGTMTGAGGTAIVSISTSVSTSVYLAIVFNGLFTEEDVAD 326


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 9   HHCRC*WFRSWGWL*AGN 62
           HHCR  +  S GW  AG+
Sbjct: 75  HHCRFKFSSSVGWSPAGH 92


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 56  WQCCAISSMPAKRRNSVNP 112
           W+   +S  P +RR S NP
Sbjct: 174 WEGTTLSQSPNRRRASSNP 192


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 606 SIYKSYKQYYTSHLISLTA 550
           S YK YK  Y    +SLTA
Sbjct: 38  SFYKIYKYTYNIVAVSLTA 56


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 120 HWHHPRSRRNPASSQIRWQVESNG 191
           HWH   S+  P  SQ   Q+  NG
Sbjct: 273 HWHLTDSQSFPLVSQRVPQLAKNG 296


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 328 INGEWVP 308
           +NGEWVP
Sbjct: 91  VNGEWVP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,104
Number of Sequences: 336
Number of extensions: 4245
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)