Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30328
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 83 2e-16
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 48 7e-06
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 43 3e-04
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 40 0.002
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 29 4.6
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 138 bits (333), Expect = 5e-33
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAAVNGFALGGGCELAM+CDIIYA +KAKFGQPEI IGTIPGAGGTQRL R VGKS
Sbjct: 132 KPVIAAVNGFALGGGCELAMMCDIIYASDKAKFGQPEILIGTIPGAGGTQRLTRAVGKSL 191
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
AME+VLTG+ +A A K GLVSK
Sbjct: 192 AMEMVLTGDPINADHALKAGLVSK 215
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 17/95 (17%)
Frame = +3
Query: 255 VFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQ-----------------AYETTLKS 383
VFP + L+ IK AE+I S L V +AK+ +N AYE TL+
Sbjct: 216 VFPADDLVPNAIKTAEKIAGLSKLSVGIAKECLNYGKCQKLSVGITKECLNFAYEMTLEE 275
Query: 384 GLQFEKSTFYGTFATEDRKEGMTAFVEKRPPNFKN 488
GL+ EK F+ TFA +DRKEGMTAF+EKR P FK+
Sbjct: 276 GLKVEKRMFHTTFALDDRKEGMTAFIEKRKPEFKD 310
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAK--FGQPEINIGTIPGAGGTQRLPRYVGK 177
KP++AA+ G +GGG ELA+ C A K PE+ +G +PGAGGTQRLPR VG
Sbjct: 4 KPVVAAIMGTCMGGGLELALSCHYRIAVNDGKTVLSAPEVMLGLLPGAGGTQRLPRLVGL 63
Query: 178 SKAMEIVLTGNFFDAHEAEKMGLVSKYSQ 264
+++++LTG A +A+KMGLV Q
Sbjct: 64 PDSLDMMLTGKNIRAQKAKKMGLVDMLVQ 92
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
+P+I A+ G+A+GGG ELA+LCD+ E + FG G GG RLP +G S+
Sbjct: 121 QPVIGAIQGYAVGGGLELALLCDLRVCEEDSVFGFFNRRFGVPLVDGGAVRLPYLIGLSR 180
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
A+++++TG A EA ++GLV++
Sbjct: 181 ALDLIMTGRAVKAQEAIEIGLVNR 204
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = +1
Query: 10 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAM 189
+I G A GC+L CD+ A +K++F P +NIG G L R V + AM
Sbjct: 85 LILLSTGLATAAGCQLVASCDVAVASDKSQFATPGVNIGLFCSTPGV-ALARAVPRKVAM 143
Query: 190 EIVLTGNFFDAHEAEKMGLVSK 255
E++LTG A EA + GLVS+
Sbjct: 144 EMLLTGRPITAGEALRHGLVSR 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 VFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATED 434
V P ++L E +++ +I S +V + K T ++ ++ ED
Sbjct: 166 VVPEDQLENEVNRISSKIAEVSRPVVAMGKACFYSQVAQTRDQAYKYAENVMIENLKMED 225
Query: 435 RKEGMTAFVEKR-PPN 479
KEG+ AFVEKR PPN
Sbjct: 226 GKEGIKAFVEKRMPPN 241
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGT--IPGAGGTQRLPRYVGKSKA 186
+AA+ G A+ GGC L++ CD + G PE+++G P GT L VG+++A
Sbjct: 1517 MAAIKGHAIAGGCVLSLACDYSVMASDFRIGLPELSLGLYFAPWMAGT--LSNAVGRNRA 1574
Query: 187 MEIVLTGNFFDAHEAEKMGLVSK 255
+I+ FDA +A +GL+ K
Sbjct: 1575 EKIIYNAQVFDADDAAGIGLIDK 1597
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/96 (30%), Positives = 51/96 (53%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP++AA+NG A+G + L D+++A ++A F P + +G P + P +G S
Sbjct: 168 KPLVAAINGPAVGISVTVLGLFDLVFATDRATFHTPFMELGQSPEGCSSFTFPAIMGPSL 227
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKYSQWKNF*KKPS 291
A +++L A EA K G +S+ +F ++ S
Sbjct: 228 ANQVLLASRKLTAAEALKCGFISEVFPHDDFSREVS 263
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/84 (40%), Positives = 41/84 (48%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KPIIAAVNG A G G L LCDI+Y EK G P T LP+ VG +
Sbjct: 345 KPIIAAVNGDAKGFGTSLVALCDIVYVCEKINLELSFTKWGHTPIGCCTYTLPQAVGHAG 404
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
A ++L A +A GL S+
Sbjct: 405 AYGMLLFSTKMSAEDAWMNGLASE 428
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/79 (36%), Positives = 36/79 (45%)
Frame = +1
Query: 13 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAME 192
+AAVNG A+ GGC LA CD G E +G +Q + VG S
Sbjct: 85 VAAVNGHAVAGGCLLAAACDYRLMAANFTIGMNETIVGIAIPFWISQNIVNLVGTSTGER 144
Query: 193 IVLTGNFFDAHEAEKMGLV 249
I G A EA+K+GLV
Sbjct: 145 ICALGTMLSAEEAQKIGLV 163
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAAV+ +GGG ++ CDI A F E+ +G G QR+P+ VG
Sbjct: 40 KPVIAAVHSACVGGGVDMICACDIRLCTSDAWFQVKEVELGLAADVGTLQRMPKIVGNES 99
Query: 184 AM 189
+
Sbjct: 100 GI 101
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 102
KP+I A+ G+A+GGG ELA+LCD+ E + F
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDSVF 390
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 82 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKY 258
A EK F PE IG P GG LPR GK + + LTG + + G+ + Y
Sbjct: 134 ATEKTTFAMPETAIGFFPDVGGAHALPRLSGK-LGLFLALTGQRLKGYNVKLAGIATHY 191
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 36.3 bits (80), Expect = 0.023
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Frame = +1
Query: 13 IAAVNGFALGGGCELAMLCDI------IYAGEKAKFG---QPEIN-----IGTIPGAGGT 150
+AA+ G A+GGG E + ++ F +PEI +G PG GG
Sbjct: 974 LAAIQGLAIGGGAEAHTQGGAGGVNAPPHTTAESPFSVLNRPEIKFVQARMGLTPGWGGG 1033
Query: 151 QRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 249
RL + VG+ KAMEI+L E+ GLV
Sbjct: 1034 ARLVQLVGRQKAMEILLQCKSMKLEESLMCGLV 1066
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQR-LPRYVGKS 180
KPI+A ++ A G G +L +CD++ ++A G P I++ + G PR +G S
Sbjct: 588 KPIVATISKPAHGLGAQLVAMCDMVC--DEASLGSP-IDVASAKANGIVPYCFPRLMGHS 644
Query: 181 KAMEIVLTG 207
E +L G
Sbjct: 645 AVSEQLLMG 653
>SB_34182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 189 HCFRLANVSGKTLGSSGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTPKSETINS 19
HC+ ++N T+G+ G G + L +T RL D+ +HC L + TI
Sbjct: 80 HCYLVSNAYPSTIGAKGFDIGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 137
Query: 18 GNDGF 4
G GF
Sbjct: 138 GAKGF 142
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 189 HCFRLANVSGKTLGSSGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTPKSETINS 19
HC+ ++N T+G+ G G + L +T RL D+ +HC L + TI
Sbjct: 125 HCYLVSNAYPSTIGAKGFDVGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 182
Query: 18 GNDGF 4
G GF
Sbjct: 183 GAKGF 187
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 189 HCFRLANVSGKTLGSSGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTPKSETINS 19
HC+ ++N T+G+ G G + L +T RL D+ +HC L + TI
Sbjct: 170 HCYLVSNAYPSTIGAKGFDVGDSALLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 227
Query: 18 GNDGF 4
G GF
Sbjct: 228 GAKGF 232
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 189 HCFRLANVSGKTLGSSGSGDGANVDLGLTEFRLFAGIDDI---AQHCQLTTTPKSETINS 19
HC+ ++N T+G+ G G + L +T RL D+ +HC L + TI
Sbjct: 35 HCYLVSNAYPSTVGAKGFDVGDSTLLPVTHIRLLLEQKDLMSEIRHCYLVSNAYPSTI-- 92
Query: 18 GNDGF 4
G GF
Sbjct: 93 GAKGF 97
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 287 HQAG*KDRNPLPVNCEVGQTSCEPSLRDHPQIGLAV*EVHLLW 415
H AG + P+ GQT C P + HPQ+ V ++ +W
Sbjct: 299 HLAGFAASSCCPLVKSAGQTYCRPLSKHHPQLPWPVYQIREIW 341
>SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAG-GTQRLPRYVGKS 180
K I A+ G A GG +A+ D+ ++ + P + + G+ T LP+ VG+
Sbjct: 292 KVTITAMQGNAGAGGVMMALASDLTWSRDGVVLN-PHYRLMHLFGSEYHTYFLPQRVGRD 350
Query: 181 KAMEIVLTGNFFDAHEAEKMGLV 249
KA +++ + + EA +GLV
Sbjct: 351 KAEDLLSSAAPLLSREAVNIGLV 373
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 232 RLHEHQRSFLSTRS---PLLSTCQRIWEDAGFLRLRGWCQ 122
R+H R F++ S PLLSTCQR+ L CQ
Sbjct: 182 RVHSSMRPFVNASSRQLPLLSTCQRVLSSTCKRVLSSTCQ 221
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 499 KIYSFLKFGGLFSTNAVIPSLRSSVAKVP*KV 404
K++S LK GG + +A+ P+L ++K+P +V
Sbjct: 280 KLWSLLKNGGSGNASAIFPNLLPFISKLPAQV 311
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,288,733
Number of Sequences: 59808
Number of extensions: 501018
Number of successful extensions: 1119
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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