Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30328
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    69   1e-13
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.72 
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    25   2.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.9  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 68.9 bits (161), Expect = 1e-13
 Identities = 33/84 (39%), Positives = 50/84 (59%)
 Frame = +1

Query: 4   KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
           KP++ A+ G+ + GG ELA++CD+    E A  G      G     GGT RLP  +G S+
Sbjct: 140 KPLVCAITGYCVAGGLELALMCDLRVMEENAVLGFFNRRFGVPLIDGGTVRLPALIGLSR 199

Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
           A++++LTG    A EA  +GLV++
Sbjct: 200 ALDLILTGRTVTAKEALDIGLVNR 223


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 0.72
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 149 VPPAPGMVPMLISG*PNFAFSPA*MISHSIASSQPPPRAKP 27
           +PP PGM+P +  G P     P   +   +   +PPP   P
Sbjct: 85  MPPRPGMIPGM-PGAPPLLMGPNGPLPPPMMGMRPPPMMVP 124


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 420 RFHRRWTS--QTASPI*GWSRKLGSQLVWPTSQLTGSGFRS 304
           R  R WT+  +T +P  G    L   + WPT   TG+G+ S
Sbjct: 500 RVVRMWTNFAKTGNPTPGQDALL-QNVQWPTVGATGTGYLS 539


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 450 TAFVEKRPPNFKNE*IFPLFHVFYVVENVL 539
           T+F  K+P +F+   + PL +VF  ++  L
Sbjct: 850 TSFELKKPKDFRKHSLLPLNNVFDRIKGAL 879


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 1   GKPIIAAVNGFALGGGCELAMLCD 72
           GK  I A     +GG C+L   CD
Sbjct: 42  GKSAIVAGIVLGMGGNCKLLSRCD 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,251
Number of Sequences: 2352
Number of extensions: 18567
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)