BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30328
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 136 1e-32
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 130 7e-31
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 91 5e-19
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 77 9e-15
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 77 9e-15
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 77 9e-15
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 75 5e-14
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 57 1e-08
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 46 2e-05
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical pr... 32 0.43
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 31 0.76
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 31 0.76
Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY728060-1|AAU43721.1| 277|Caenorhabditis elegans cadmium-induc... 29 3.0
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.3
L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical pr... 27 9.3
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 136 bits (330), Expect = 1e-32
Identities = 65/84 (77%), Positives = 72/84 (85%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAAVNGFALGGG ELAM+CDIIYAGEKA+FGQPEINIGTIPGAGGTQR R GKS
Sbjct: 126 KPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSF 185
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
AME+ LTGN A EA++ G+VSK
Sbjct: 186 AMEVCLTGNHVTAQEAKEHGIVSK 209
Score = 105 bits (253), Expect = 2e-23
Identities = 46/88 (52%), Positives = 68/88 (77%)
Frame = +3
Query: 228 SRENGSCQ*VFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKST 407
++E+G +FP ++++ E +KL E+I SPLIV++AK+AVN+AYE TL+ GL FE+
Sbjct: 201 AKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQMAKEAVNKAYELTLQEGLHFERRL 260
Query: 408 FYGTFATEDRKEGMTAFVEKRPPNFKNE 491
F+ TFAT+DRKEGMTAF EKR P ++++
Sbjct: 261 FHATFATKDRKEGMTAFAEKRKPQWESK 288
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 130 bits (315), Expect = 7e-31
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAAVNGFALGGG ELA++CDI+YAGE A FGQPEI IGTIPG GGTQR PRYV KS
Sbjct: 94 KPVIAAVNGFALGGGTELALMCDIVYAGENAIFGQPEITIGTIPGLGGTQRWPRYVSKSV 153
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
AMEI L+G+ A EA++ GLVSK
Sbjct: 154 AMEICLSGDRLGAQEAKEDGLVSK 177
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +3
Query: 228 SRENGSCQ*VFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKST 407
++E+G VFPV++L+ E + LA+RI +SPLIVK K+++N AY+T+L GL+ EK
Sbjct: 169 AKEDGLVSKVFPVQQLVGEAVLLADRIAKNSPLIVKTVKRSLNSAYQTSLNQGLEMEKQL 228
Query: 408 FYGTFATEDRKEGMTAFVEKRPPNF 482
F TFAT DR+EGM+AF EKR P +
Sbjct: 229 FQSTFATNDRREGMSAFAEKRAPKW 253
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 91.5 bits (217), Expect = 5e-19
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
+P+IAA++GFALGGG ELA+ CDI A +KAK G E IPGAGG+QRL R VG +K
Sbjct: 126 QPVIAAIDGFALGGGLELALACDIRVASQKAKMGLVETKWALIPGAGGSQRLYRIVGVAK 185
Query: 184 AMEIVLTGNFFDAHEAEKMGLVS 252
A E++ T + +A K+G+V+
Sbjct: 186 AKELIYTAEVLNGADAAKLGVVN 208
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 276 LEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTF 410
+E+++++A +I P+ VKLAK A+N +T + S L E+ +
Sbjct: 216 IEKSLEIARKIIPRGPIAVKLAKLAINLGSQTDITSALSVEQQCY 260
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 177
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 153 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
Query: 178 SKAMEIVLTGNFFDAHEAEKMGLVSKYSQ 264
+++ LTG A +A+K+G+V + Q
Sbjct: 213 QNVLDLTLTGKKIKADKAKKIGIVDRVIQ 241
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 177
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 127 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 186
Query: 178 SKAMEIVLTGNFFDAHEAEKMGLVSKYSQ 264
+++ LTG A +A+K+G+V + Q
Sbjct: 187 QNVLDLTLTGKKIKADKAKKIGIVDRVIQ 215
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 177
KP++AA+ G +GGG ELA+ C I +K PE+ +G +PGAGGTQRLP+
Sbjct: 153 KPVVAAIMGSCMGGGLELALACHYRIAVNDKKTLLSLPEVMLGLLPGAGGTQRLPKLTTV 212
Query: 178 SKAMEIVLTGNFFDAHEAEKMGLVSKYSQ 264
+++ LTG A +A+K+G+V + Q
Sbjct: 213 QNVLDLTLTGKKIKADKAKKIGIVDRVIQ 241
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 177
KPI+AA+ G +GGG E+A+ C I +K G PE+ +G +PG GGTQRLP+
Sbjct: 127 KPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTV 186
Query: 178 SKAMEIVLTGNFFDAHEAEKMGLVSKYSQ 264
+++ LTG A++A K+G+V + Q
Sbjct: 187 QNVLDLTLTGKRIKANKAMKIGIVDRVIQ 215
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/86 (43%), Positives = 55/86 (63%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAA+ GFA+ GG EL+++ D+ + AKFG +G GGT RLPR +G +
Sbjct: 99 KPLIAAIEGFAVAGGLELSLMADLRVSSPSAKFGVFCRRVGVPLIDGGTVRLPRVIGLGR 158
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKYS 261
A++++LTG A EA + GLV++ S
Sbjct: 159 ALDMILTGREVGAQEALQWGLVNRIS 184
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/84 (39%), Positives = 46/84 (54%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KPIIA VNG A+G + + D + A + A F P +IG P A + LPR +G K
Sbjct: 96 KPIIALVNGHAVGVSVTMLGVMDAVIAIDTATFATPFADIGVCPEACSSYTLPRIMGHQK 155
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
A +++ F AHEA GLV++
Sbjct: 156 AAALMMFSEKFTAHEAHIAGLVTQ 179
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK-S 180
KP+I A++G+ LG ++A CD+ A + A E++IG G RLP+ VG S
Sbjct: 113 KPVILAMHGYCLGAALDIATACDVRVATKDAVLSVKEVDIGMAADVGTLNRLPKIVGNHS 172
Query: 181 KAMEIVLTGNFFDAHEAEKMGLVSK 255
+I L+ F A EA + GL+S+
Sbjct: 173 WIKDISLSARHFSAGEALQFGLLSR 197
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 267 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEG 446
E+++ E +K+A+ I SP+ V+ K A+N A + T+++ L + + T+D +
Sbjct: 203 EEMINEVLKMAKLIALKSPVGVQGTKNALNYARDHTVENSLNYVATWNMSQLFTDDIMKA 262
Query: 447 MTAFVEKRP 473
A + K+P
Sbjct: 263 SMASLSKQP 271
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK-S 180
KPIIA+++ LG G +L CDI A + A F E+++G G R+ + VG S
Sbjct: 133 KPIIASIHSHCLGAGIDLITACDIRVASQDAIFSIREVDVGLAADIGTLNRIQKVVGNDS 192
Query: 181 KAMEIVLTGNFFDAHEAEKMGLVSK 255
++ T F A EA + GL+S+
Sbjct: 193 WTRDVAFTARDFGADEALRFGLISR 217
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 267 EKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEG 446
+ LLE +I +A RI SP+ V+ K+ +N A E + L F K+ + D
Sbjct: 223 QSLLENSIDMAARIAEKSPIAVQGTKETLNYAREHSTDDSLNFIKTWNMSQLLSTDLLSS 282
Query: 447 MTAFVEKRPPNFKN 488
A + K+ +++
Sbjct: 283 AMAVMNKKKATYED 296
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 7 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKA 186
P+IA VNG A G +L CD++ AG+ +KF P +G G L R V + A
Sbjct: 113 PVIAEVNGTAAAAGLQLVASCDVVVAGKSSKFLVPGQKLGLFCSTPGI-ALVRAVPRKVA 171
Query: 187 MEIVLTGNFFDAHEAEKMGLVSK 255
M+++LT D+ A + GLVS+
Sbjct: 172 MDMLLTAQPIDSEAALRSGLVSR 194
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 282 ETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFV 461
E + +AE+IG S + L K E + ++ G +D +EG++AF+
Sbjct: 204 EALNVAEQIGHFSRSVTALGKAFFYTQAELSTVDAYRYGSRVMVGNLKLKDCQEGISAFI 263
Query: 462 EKRPPNFKN 488
KRP +F++
Sbjct: 264 GKRPADFEH 272
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IA +NG A+G + + D + A +KA F P +G P + P +G +
Sbjct: 227 KPLIALINGPAVGIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMGSLR 286
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
A E++L A A+ GLV++
Sbjct: 287 ASEMLLVCKKISAQTAKDYGLVNE 310
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 13 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAME 192
IA ++G ALGG E+ DI A +K + +G +P GG + + +G+ +A+
Sbjct: 121 IAKIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMGIVPSWGGAEYMEGIMGRGRALA 180
Query: 193 IVLTGNFFDAHEAEKMGLV 249
+ N A EA+ G V
Sbjct: 181 AMGRANVMSAEEAKDQGYV 199
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
K + ++G +GGGC L++ A EK PE +G P GG+ L R G +
Sbjct: 113 KQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG-NL 171
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKY 258
M + LTG +A GL + +
Sbjct: 172 GMYLALTGYRLLGADAFHAGLATHF 196
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
K + ++G +GGGC L++ A EK PE +G P GG+ L R G +
Sbjct: 136 KQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG-NL 194
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKY 258
M + LTG +A GL + +
Sbjct: 195 GMYLALTGYRLLGADAFHAGLATHF 219
>Z81066-2|CAB02971.1| 239|Caenorhabditis elegans Hypothetical
protein F17B5.3 protein.
Length = 239
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 358 WFTACLANFTINGEWVPILSASLMVSSKSFSTGNTY*QDPFSRLHEHQRSFLSTRSPLLS 179
W T L NF I + SS S+S+ ++ ++ R H++ R S+RS
Sbjct: 12 WVTITLGNFRNENPRKVIKIIKHVGSSSSYSSSSS--EERSKRRHKNSRLTHSSRSRPTR 69
Query: 178 TCQRIWEDAGFLRLRG-WC 125
TC R W F R +G WC
Sbjct: 70 TCPRDW--ITFERPQGRWC 86
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 67 CDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAM--EIVLTGNFFDAHEAEKM 240
C +Y + F P G +P G Q++ +G +A EIV G ++ +
Sbjct: 98 CPPVYGPARNCFYVPHHFYGVLPENGVVQKVSIQLGHREAFLSEIVEIGKSYEKGLTVCL 157
Query: 241 GLVSKYSQWKN 273
+V YSQW+N
Sbjct: 158 QIVYYYSQWQN 168
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 67 CDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAM--EIVLTGNFFDAHEAEKM 240
C +Y + F P G +P G Q++ +G +A EIV G ++ +
Sbjct: 98 CPPVYGPARNCFYVPHHFYGVLPENGVVQKVSIQLGHREAFLSEIVEIGKSYEKGLTVCL 157
Query: 241 GLVSKYSQWKN 273
+V YSQW+N
Sbjct: 158 QIVYYYSQWQN 168
>Z75531-9|CAA99802.1| 277|Caenorhabditis elegans Hypothetical
protein K01D12.12 protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = -2
Query: 449 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 309
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>AY728060-1|AAU43721.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-6 protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = -2
Query: 449 HTFFAVLRSKGSIEG------GLLKLQARFEGGLVSLVHSLFGQLHN*RGVGS 309
H F+ +LR K S++ GLL L + F LV LV ++FG R VG+
Sbjct: 140 HLFYVLLRYKSSVDMFYEIIVGLLGLPSAFNAVLVPLVKAVFGSKVYSRCVGA 192
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 226 HEHQRSFLSTRSPLLSTCQRIW 161
H H F++T+ PL +TC+ W
Sbjct: 1230 HGHPHRFIATQGPLDNTCEDFW 1251
>L11247-9|AAK84522.2| 639|Caenorhabditis elegans Hypothetical
protein F09G8.8 protein.
Length = 639
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 323 VNCEVGQTSCEPSLRDHPQIGL 388
+N VGQ S +P+++ H Q+GL
Sbjct: 312 INTLVGQMSLDPNIQKHVQVGL 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,981,497
Number of Sequences: 27780
Number of extensions: 395922
Number of successful extensions: 988
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -