Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30328
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 95 3e-20
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 95 4e-20
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 92 3e-19
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 80 1e-15
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 76 2e-14
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 73 2e-13
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 40 0.001
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 39 0.003
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 38 0.006
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 37 0.014
At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr... 35 0.043
At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr... 32 0.40
At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr... 32 0.40
At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family pr... 30 1.6
At3g12890.1 68416.m01606 expressed protein 29 2.1
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 29 3.7
At1g26760.1 68414.m03258 SET domain-containing protein contains ... 28 6.5
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 28 6.5
At3g61130.1 68416.m06841 glycosyl transferase family 8 protein c... 27 8.6
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 27 8.6
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 27 8.6
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP++AAV G ALGGG ELAM C A KA+ G PE+ +G IPG GGTQRLPR VG +K
Sbjct: 100 KPVVAAVEGLALGGGLELAMACHARVAAPKAQLGLPELTLGVIPGFGGTQRLPRLVGLAK 159
Query: 184 AMEIVLTGNFFDAHEAEKMGLV 249
A +++L + E K+GL+
Sbjct: 160 ATDMILLSKSISSEEGHKLGLI 181
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/82 (54%), Positives = 55/82 (67%)
Frame = +1
Query: 7 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKA 186
P IAA+ G ALGGG E+A+ CD+ GE A FG PE + IPGAGGTQRL R VG+S +
Sbjct: 68 PTIAAIEGAALGGGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVS 127
Query: 187 MEIVLTGNFFDAHEAEKMGLVS 252
E++ TG DA EA GLV+
Sbjct: 128 KELIFTGRKIDAIEAANKGLVN 149
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +3
Query: 279 EETIKLAERIGTHSPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAF 458
E+ I++A++I PL +K+AK+A+++ ET + SGL+ E+ + T+DR EG+ AF
Sbjct: 159 EKAIEMAQQINEKGPLAIKMAKKAIDEGIETNMASGLEVEEMCYQKLLNTQDRLEGLAAF 218
Query: 459 VEKRPP 476
EKR P
Sbjct: 219 AEKRKP 224
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP +AA++G ALGGG ELAM C + A+ G PE+ +G IPG GGTQRLPR VG +K
Sbjct: 103 KPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTK 162
Query: 184 AMEIVLTGNFFDAHEAEKMGLV 249
A+E++LT A E +GL+
Sbjct: 163 ALEMILTSKPVKAEEGHSLGLI 184
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IAA++G +GGG +L CDI Y E A F E+++ + G QRLP VG +
Sbjct: 115 KPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYAN 174
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSK 255
AME+ LT F EA+ +GLVSK
Sbjct: 175 AMELALTARRFSGSEAKDLGLVSK 198
>At1g60550.1 68414.m06816 naphthoate synthase, putative /
dihydroxynaphthoic acid synthetase, putative / DHNA
synthetase, putative contains similarity to MENB from
Escherichia coli [SP|P27290], Bacillus subtilis
[SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 337
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP+IA V G+A+GGG L M+CD+ A + A FGQ +G+ G+ + R VG K
Sbjct: 172 KPVIAMVAGYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKK 231
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKYSQWKNF*KKPSSWLK 303
A E+ F+ A EAEKMGL++ ++ K+ W +
Sbjct: 232 AREMWFMTRFYTASEAEKMGLINTVVPLEDLEKETVKWCR 271
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 VFPVEKLLEETIKLAERIGTHSPLIVKLAKQAVNQAYETTLK-SGLQFEKSTFYGTFATE 431
V P+E L +ET+K I +SP +++ K A+N + GL + + + + TE
Sbjct: 256 VVPLEDLEKETVKWCREILRNSPTAIRVLKAALNAVDDGHAGLQGLGGDATLLF--YGTE 313
Query: 432 DRKEGMTAFVEKRPPNF 482
+ EG TA++ +RPP+F
Sbjct: 314 EATEGRTAYMHRRPPDF 330
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/83 (44%), Positives = 48/83 (57%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KPII A+NGFA+ G ELA+ CDI+ A AKF G P G +Q+L R +G +K
Sbjct: 99 KPIIGAINGFAITAGFELALACDILVASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANK 158
Query: 184 AMEIVLTGNFFDAHEAEKMGLVS 252
A E+ LT A A K+G V+
Sbjct: 159 AREVSLTSMPLTADVAGKLGFVN 181
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVG 174
KP ++ +NG +GGG L+ A E F PE +G P G + RLP + G
Sbjct: 146 KPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFG 205
Query: 175 KSKAMEIVLTGNFFDAHEAEKMGLVSKY 258
+ + LTG D E GL + +
Sbjct: 206 E----YVGLTGARLDGAEMLACGLATHF 229
>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 378
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVG 174
KP ++ +NG +G G +++ A E F PE ++G P G + RLP + G
Sbjct: 102 KPQVSILNGIVMGAGAGVSIHGRFRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFG 161
Query: 175 KSKAMEIVLTGNFFDAHEAEKMGLVSKY 258
+ + LTG D E GL + +
Sbjct: 162 E----YVGLTGARLDGAELLACGLATHF 185
>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
protein similar to enoyl-CoA-hydratase, Avicennia
marina, EMBL:AF190450 [GI:6014701], CoA-thioester
hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 401
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
KP +A +NG +GGG +++ A ++ F PE IG P AG + L G+
Sbjct: 134 KPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGR-L 192
Query: 184 AMEIVLTGNFFDAHEAEKMGLVSKY 258
+ LTG E GL + Y
Sbjct: 193 GEYLGLTGLKLSGAEMLACGLATHY 217
>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
CoA-thioester hydrolase (CHY1) identical to gi:8572760;
contains Pfam profile PF00388 enoyl-CoA
hydratase/isomerase family protein
Length = 378
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVG 174
K ++ +NG +GGG +++ A E F PE +G P G + RLP + G
Sbjct: 106 KAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFG 165
Query: 175 KSKAMEIVLTGNFFDAHEAEKMGLVSKY 258
+ + LTG D E GL + +
Sbjct: 166 E----YVGLTGARLDGAEMLACGLATHF 189
>At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 387
Score = 35.1 bits (77), Expect = 0.043
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 4 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGT---QRLPRYVG 174
K ++ VNG ++GGG L + EK F PE + G G + RLP ++G
Sbjct: 106 KTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLG 165
Query: 175 KSKAMEIVLTGNFFDAHEAEKMGLVSKY 258
+ + LTG + E +G+ + +
Sbjct: 166 EF----LALTGARLNGKELVAIGMATHF 189
>At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family
protein low siimilarity to 2-cyclohexenylcarbonyl CoA
isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA
isomerase [Escherichia coli] GI:2764829; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 240
Score = 31.9 bits (69), Expect = 0.40
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 7 PIIAAVNGFALGGGCELAMLCDIIY-AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
P IAA+NG A G LA+ D ++ ++ E++IG + + +G S
Sbjct: 99 PTIAALNGHAAAAGLILALSHDYVFMRKDRGVLYMSEVDIGLSMPDYFSALVRAKIGTSA 158
Query: 184 A-MEIVLTGNFFDAHEAEKMGLV 249
A E++L+G EA +G+V
Sbjct: 159 ARRELLLSGKKIRGEEAVGLGIV 181
>At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family
protein low similarity to enoyl-CoA hydratase
[Escherichia coli] GI:2764828, carnitine racemase
SP|P31551 [Escherichia coli]; contains Pfam profile
PF00378 enoyl-CoA hydratase/isomerase family protein
Length = 240
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 7 PIIAAVNGFALGGGCELAMLCD-IIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSK 183
P IAAV G A GC LAM D ++ ++ E++I I A + +G
Sbjct: 94 PTIAAVTGHASAAGCILAMSHDYVLMRRDRGFLYMSELDIELIVPAWFMAVIRGKIGSPA 153
Query: 184 A-MEIVLTGNFFDAHEAEKMGLV 249
A +++LT A KMG+V
Sbjct: 154 ARRDVMLTAAKVTADVGVKMGIV 176
>At4g14440.1 68417.m02227 enoyl-CoA hydratase/isomerase family
protein low similarity to PhaB [Pseudomonas putida]
GI:3253198, SP|P31551 Carnitine racemase {Escherichia
coli}; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 238
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 7 PIIAAVNGFALGGGCELAMLCDIIY-AGEKAKFGQPEINIG-TIPGAGGTQRLPRYVGKS 180
P IAA+NG A G A+ D ++ ++ E++IG +P + +
Sbjct: 97 PTIAALNGHAAASGLMFALSHDYVFMRKDRGVLYMSEVDIGLPVPDYFSALVVAKVGSGI 156
Query: 181 KAMEIVLTGNFFDAHEAEKMGLV 249
E++L+G EA +G+V
Sbjct: 157 ARRELLLSGKKLKGEEAVALGIV 179
>At3g12890.1 68416.m01606 expressed protein
Length = 251
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 318 SPLIVKLAKQAVNQAYETTLKSGLQFEKSTFYGTFATEDRKEGMTAFVEKR 470
SP I L + A + + G+Q E +T G ++ E+RK+ + +++K+
Sbjct: 100 SPEIKPLFRPATGEQSWGNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKK 150
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 78 LCRRKGEIRSTRDQHWHHPRSRRNPASSQIRWQVESN 188
LC+ + E+ +T Q P+S +P +SQ + +++N
Sbjct: 180 LCKTRSEMHTTLQQGGRSPKSMNSPTTSQPKDGIQNN 216
>At1g26760.1 68414.m03258 SET domain-containing protein contains
Pfam profiles PF00856: SET domain, PF00515:
tetratricopeptide repeat (TPR) domain
Length = 967
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 123 WHHPRSRRNPASSQIRWQVESNGDRVDR 206
W+H S++NP S I V +NG +R
Sbjct: 103 WYHGSSKQNPVSDSIGLAVSNNGIHWER 130
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 161 GRRWVPPAPGMVPMLISG*PNFAFSPA 81
GRRW P GM+ +L G NF FS A
Sbjct: 294 GRRWKNPVSGMM-LLSDGQDNFTFSHA 319
>At3g61130.1 68416.m06841 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 673
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 208 NFFDAHEAEKMGLVSKYSQWKNF*KKPSSWLKGSEP 315
N FD E +K + Y +W+N + + W G+ P
Sbjct: 560 NMFDLKEWKKRDITGIYHKWQNMNENRTLWKLGTLP 595
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 210 VSCQHDLHCFRLANVSGKTLGSSGSGDGANVDLGLT 103
VSC H +HCF LA K L S +G G+ + LT
Sbjct: 199 VSCLHMVHCFHLAGFP-KGLISCITGKGSEIGDFLT 233
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 210 VSCQHDLHCFRLANVSGKTLGSSGSGDGANVDLGLT 103
VSC H +HCF LA K L S +G G+ + LT
Sbjct: 199 VSCLHMVHCFHLAGFP-KGLISCITGKGSEIGDFLT 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,076,848
Number of Sequences: 28952
Number of extensions: 377197
Number of successful extensions: 939
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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