Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30327
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 489 KCI*FYCPTIVLFF 530
           KC+ F+C  +V+F+
Sbjct: 63  KCLAFFCTALVIFY 76


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 489 KCI*FYCPTIVLFF 530
           KC+ F+C  +V+F+
Sbjct: 296 KCLAFFCTALVIFY 309


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 489 KCI*FYCPTIVLFF 530
           KC+ F+C  +V+F+
Sbjct: 296 KCLAFFCTALVIFY 309


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 573 YNHRPKLGMIVNRKQ 529
           YNHRP   + +N+KQ
Sbjct: 532 YNHRPWQQLHLNKKQ 546


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 407 NK*RIHITETVCLVRVLERSR*RK 336
           N   I IT TVC + +LE  R +K
Sbjct: 289 NTLEILITVTVCELTILEYKRTKK 312


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 407 NK*RIHITETVCLVRVLERSR*RK 336
           N   I IT TVC + +LE  R +K
Sbjct: 114 NTLEILITVTVCELTILEYKRTKK 137


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -1

Query: 302 CLRLPLGALFQLHKKLINSYAIENVKKLA 216
           CL  PL +L  + + ++   A+E+++ +A
Sbjct: 90  CLLPPLESLATVEETVVRDKAVESLRAVA 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,710
Number of Sequences: 336
Number of extensions: 2456
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)