Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30326
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   1.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.1  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   5.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.1  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 312 NYSLSNSFTLSDHMV 356
           N+ +SN++TLSDH V
Sbjct: 183 NWRVSNAYTLSDHRV 197


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 264  FIHSIFRRKCLWKLIPNYSLSNSF 335
            F+ S+  R+CL ++ PNY    +F
Sbjct: 1532 FVASVNARQCLIEMKPNYGTFETF 1555


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 188  RRKVRLQAAGEYVSGSRSRT 129
            R + R Q+AG   SGSRSR+
Sbjct: 1131 RSRSRSQSAGSRKSGSRSRS 1150


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 157  SPAA*RRTFLLREQCHSTHICNNG 228
            +P   R  FL+ E  H  H+CN G
Sbjct: 1110 APIVARAAFLI-ECAHFVHLCNRG 1132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,552
Number of Sequences: 2352
Number of extensions: 10970
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)