Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30325
         (538 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.0  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.0  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   8.0  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   8.0  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   8.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   8.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 264 IRDRKVSFLKMESSSDMTLYLMQAV 190
           I  R + FLK +SSS++   L +AV
Sbjct: 219 ILGRHLGFLKPDSSSELATRLAEAV 243


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 504 LELSFACFSN*TSAFLVELD 445
           LE +F C  N  +AFL  LD
Sbjct: 156 LERAFRCLGNNLTAFLTTLD 175


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 56  VVCLVALALFGSVAAQP 106
           ++CLV +A    VAA+P
Sbjct: 5   IICLVLMAAIVLVAARP 21


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 RSDEERRWQRRDWPI 314
           R+ EER  +RR+W I
Sbjct: 30  RTQEERLRRRREWMI 44


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 56  VVCLVALALFGSVAAQP 106
           ++CLV +A    VAA+P
Sbjct: 5   IICLVLMAAIVLVAARP 21


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 56  VVCLVALALFGSVAAQP 106
           ++CLV +A    VAA+P
Sbjct: 5   IICLVLMAAIVLVAARP 21


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 162 LISSTML-SIGVPFQKASLAGC 100
           L+++T++  +GV FQK  L  C
Sbjct: 499 LVNTTVMRDLGVEFQKIELKQC 520


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,252
Number of Sequences: 438
Number of extensions: 2999
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)