Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30323
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.52 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.90 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   4.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 664 SSPQVRNVHVNSWSAVLSAADAPGYD 587
           S PQVRN+  N +  +LS  DA  +D
Sbjct: 450 SDPQVRNLLDNGYRVILSNYDALYFD 475


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 517 AGVLSGSPPXHMNVECNWKNRPSRVL 440
           A  +  +P   + +ECNW + P+  L
Sbjct: 3   ASYVPNNPQFGLQLECNWSSGPNATL 28


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 565 LLIVYGAHEGRPPVPP 518
           L++  G H   PPVPP
Sbjct: 683 LVLQVGTHADLPPVPP 698


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   RARRQKLNVYVGGGSLIHPNVVLTA 75
           + RR KLN Y+G  + + P V  +A
Sbjct: 38  KMRRDKLNSYIGELATLVPMVARSA 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 105  EDQSRRMGHAEHEGDISVSRQDSQ 176
            +D +RRMG   ++GD  VS  D +
Sbjct: 1695 QDPNRRMGPYAYKGDQWVSFDDRE 1718


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 595 GYDAVLDIAILLIVYGAHEGRPPVP 521
           GYD   D  + L +YG H      P
Sbjct: 76  GYDFPKDTFLSLFIYGMHHNEKYFP 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,560
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)