Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30322
         (624 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1026 + 30214437-30214937                                        133   9e-32
02_05_0416 + 28791512-28792012                                        130   1e-30
03_06_0776 - 36176390-36177589                                         29   3.0  
11_01_0669 - 5454116-5454153,5454569-5454770,5454865-5455029,545...    28   6.9  
04_04_1551 - 34348110-34348225,34348468-34348606,34348658-343488...    27   9.2  

>04_04_1026 + 30214437-30214937
          Length = 166

 Score =  133 bits (322), Expect = 9e-32
 Identities = 62/82 (75%), Positives = 78/82 (95%)
 Frame = +1

Query: 256 KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIA 435
           KGL++TV+LTVQNRQA+++VVPSAAAL+I+ALKEP RDRKK KNIKH+GNISL+DV+ IA
Sbjct: 55  KGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIA 114

Query: 436 KIMRNRSMARYLSGSVKEILGT 501
           +IMRNRSMA+ ++G+VKEILGT
Sbjct: 115 RIMRNRSMAKEMAGTVKEILGT 136



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +2

Query: 98  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS 250
           MPPK DP ++  V +R  GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+
Sbjct: 1   MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA 51



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 510 VGCTVEGRPPHDLIDDINSG 569
           VGCTV+G+ P DL  +I+ G
Sbjct: 140 VGCTVDGKDPKDLQQEISDG 159


>02_05_0416 + 28791512-28792012
          Length = 166

 Score =  130 bits (313), Expect = 1e-30
 Identities = 60/82 (73%), Positives = 77/82 (93%)
 Frame = +1

Query: 256 KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVVGIA 435
           KGL++TV+LTVQNRQA+++VVPSAAAL+I+ALKEP RDRKK KNIKH+GNISL+DV+ IA
Sbjct: 55  KGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIA 114

Query: 436 KIMRNRSMARYLSGSVKEILGT 501
           ++MR RSMA+ ++G+VKEILGT
Sbjct: 115 RVMRPRSMAKEMAGTVKEILGT 136



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +2

Query: 98  MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS 250
           MPPK DP ++  V +R  GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+
Sbjct: 1   MPPKLDPTQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA 51



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 510 VGCTVEGRPPHDLIDDINSG 569
           VGCTV+G+ P DL  +I+ G
Sbjct: 140 VGCTVDGKDPKDLQQEISDG 159


>03_06_0776 - 36176390-36177589
          Length = 399

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 379 QKNIKHNGNISLEDVVGIAKIMRNRSMARY 468
           +K+I++ G++ LE    + K+M +RSM RY
Sbjct: 113 EKSIQNIGSLELERNAAVEKLMSSRSMHRY 142


>11_01_0669 -
           5454116-5454153,5454569-5454770,5454865-5455029,
           5455278-5456183
          Length = 436

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 95  KMPPK-FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKV 223
           K+P + F  N +KIV ++C G EV         +G  G+  +K+
Sbjct: 369 KIPEEPFVSNHLKIVEIKCKGKEVMWVCKFLKTLGTFGIPLEKI 412


>04_04_1551 -
           34348110-34348225,34348468-34348606,34348658-34348896,
           34349042-34349140,34349207-34350188,34350737-34350832,
           34350936-34351064,34351253-34351332,34351420-34351661,
           34351743-34352692
          Length = 1023

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 137 NLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIA 238
           N +C G E G  S  AP++ PLG+ PK  G+ IA
Sbjct: 736 NSKCAGAE-GINS--APRVTPLGIRPKG-GESIA 765


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,979,927
Number of Sequences: 37544
Number of extensions: 390366
Number of successful extensions: 1076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)