Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30321
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein p...    33   1.0  
BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protei...    33   1.0  
BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protei...    33   1.0  
AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.              33   1.0  
U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.                31   4.0  

>U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein
           protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 73  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 131

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 132 KTEQAKADLARL 143


>BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 73  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 131

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 132 KTEQAKADLARL 143


>BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 73  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 131

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 132 KTEQAKADLARL 143


>AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSDVNVKR*NASEQLQPIRSFTL 317
           K KGV GLI++ENPNRV             G  E  +     +++  A E+   +     
Sbjct: 73  KRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKAKERYMKMH-LAG 131

Query: 318 KVKRSKRALTSL 353
           K +++K  L  L
Sbjct: 132 KTEQAKADLARL 143


>U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.
          Length = 171

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 138 KAKGVSGLIEVENPNRV 188
           K KGV G I++ENPNRV
Sbjct: 74  KRKGVEGFIDIENPNRV 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,823,308
Number of Sequences: 237096
Number of extensions: 872248
Number of successful extensions: 1215
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)