Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30320
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503     28   5.0  
09_02_0522 - 10169318-10169980                                         28   6.7  

>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
          Length = 685

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 286 DKNITSLIQ*YYAVPD*RPRSLRSNTNKEFAKISMRYNIKN*HSSVVQTRQVEVECDTTR 107
           D+N+ S+ + +YA    RP  L +NT  E A     ++ +      ++   ++V  D   
Sbjct: 69  DRNLCSIGRVWYA----RPVPLWNNTTGEVASFRTTFSFQ------IKPANLDVSADGMA 118

Query: 106 INM-HYINDVPHITASGCLGL 47
             + HY + +PH +  G LGL
Sbjct: 119 FFLGHYPSGIPHRSYGGNLGL 139


>09_02_0522 - 10169318-10169980
          Length = 220

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = -1

Query: 286 DKNITSLIQ*YYAVPD*RPRSLRSNTNKEFAKISMRYNIKN*HSSVVQTRQVEVECDTTR 107
           D+N+ S+ + +YA    RP  L +NT  E A     ++ +      ++   ++V  D   
Sbjct: 72  DRNLRSIGRAWYA----RPVQLWNNTTGEVASFRTTFSFQ------IKPVNLDVSADGMA 121

Query: 106 INM-HYINDVPHITASGCLGL 47
             + HY + +PH +  G LGL
Sbjct: 122 FFLGHYPSGIPHRSYGGNLGL 142


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,037,852
Number of Sequences: 37544
Number of extensions: 258909
Number of successful extensions: 448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)