Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30316
         (442 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   3.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   3.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 266 RYNFSSLLDFLRALTVIPILVFVKTSKL 183
           ++N    L  +  LTVIPI V+    K+
Sbjct: 273 QFNIEMFLCNMSLLTVIPIHVWTSKEKI 300


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 263 YNFSSLLDFLRALTVIPILVFVKTSKLIAIV 171
           Y   SLL  +  L V+  L F+K  ++  I+
Sbjct: 275 YILESLLYMVTKLVVVTFLKFIKKIQIFGIM 305


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 108 SKLFLYFHNIFFNAHFDYFV*ITH 37
           +K + Y++  FF  H  Y V I +
Sbjct: 110 TKRYCYYYYAFFGVHLAYGVVIIY 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,192
Number of Sequences: 336
Number of extensions: 1202
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)