BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30315 (668 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 130 9e-31 Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical pr... 30 1.3 AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical... 29 3.0 AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 29 3.9 AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 28 6.9 AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 27 9.1 >AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical protein Y71A12B.1 protein. Length = 246 Score = 130 bits (314), Expect = 9e-31 Identities = 60/80 (75%), Positives = 70/80 (87%) Frame = +2 Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430 KG SCYR R++GERKRKSVRGCIVDAN+S L+LVIV+KG EI GLTD +PR+LGPKRA Sbjct: 79 KGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRA 138 Query: 431 SKIRKLFNLSKEDDVRRYVV 490 SKIRKLFNL+K DDV +YV+ Sbjct: 139 SKIRKLFNLTKHDDVTKYVI 158 Score = 129 bits (311), Expect = 2e-30 Identities = 57/79 (72%), Positives = 66/79 (83%) Frame = +3 Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQG 197 M+LN +YPATG QK FEV +E KLR+F+EKRM EV D LGDEWKGYV+R+ GGNDKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 198 FPMKQGVLTNSRVRLLMSK 254 FPMKQG+LTN RVRLL+ K Sbjct: 61 FPMKQGILTNGRVRLLLKK 79 >Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical protein F46C5.7 protein. Length = 199 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = -1 Query: 317 YIHELIYVFSLHRGAVCNMSGL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFIA* 138 ++ L+Y+ + G+V N L H T +A + L+ + ++ YIA ++A Sbjct: 68 FVFVLLYL-EFYFGSVYNCPALLHLHTLSAAFMSMVCWLSVLIPIFFGESIYIASRYVAH 126 Query: 137 LISLYFGAHALF 102 +I Y+G +F Sbjct: 127 VIYKYYGCQVIF 138 >AL032637-20|CAA21612.2| 250|Caenorhabditis elegans Hypothetical protein Y43F8C.10 protein. Length = 250 Score = 29.1 bits (62), Expect = 3.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 472 CTSLCRQTRAPSQEGKENAKPRHKAPKIQR 561 CTS T S E K++ KP+ + P QR Sbjct: 90 CTSQSETTNESSGEDKDDGKPKERRPNCQR 119 >AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical protein F40G9.1 protein. Length = 636 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +3 Query: 36 YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 194 Y G ++FE+ E K RIF EK + + ++ ++ L++ G NDK+ Sbjct: 6 YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61 >AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular endothelial growthfactor) receptor family protein 2 protein. Length = 518 Score = 27.9 bits (59), Expect = 6.9 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +3 Query: 51 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQ 194 C K F+ + ++ E+++ E E Q D W G LR G DK+ Sbjct: 272 CVKFFKNYMQEEVVQNIERKLQFEREEQQELDSWTGKSLRAEGVEDKE 319 >AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical protein Y48G1C.5 protein. Length = 1161 Score = 27.5 bits (58), Expect = 9.1 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +2 Query: 341 LALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVV 490 L L +K QE+ P +GPK A +IR L L + + +VV Sbjct: 1010 LLLTFGKKRTQEVTHYQYTGWPEHMGPKDAEEIRYLLKLVTDSERPVFVV 1059 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,848,904 Number of Sequences: 27780 Number of extensions: 319590 Number of successful extensions: 937 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 890 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 937 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1508017654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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