Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30313
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 29 0.76
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 28 1.0
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 28 1.0
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 1.3
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 27 2.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.1
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 27 3.1
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 26 4.1
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 4.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 4.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.4
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 26 5.4
SPCC1620.09c |tfg1||transcription factor TFIIF complex alpha sub... 26 5.4
SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||M... 25 7.1
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.1
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 25 7.1
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 9.4
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 0.76
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 265 PTIREPTIQDPAPTQRIRPSPALDTTKSYRVRSLSRPGRTRFRNCASPTTDSPLRSSIRR 444
PTI+ T P+P Q P+P+ T + V S + P + +P + SPL S+++
Sbjct: 355 PTIKV-TAAIPSPLQNTNPAPS--TFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKP 411
Query: 445 PT-NSPN-RLPTLITNRLTKSP 504
T N N + +N T SP
Sbjct: 412 STANDTNGSSSSSSSNPRTSSP 433
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +3
Query: 216 EISVLPG*RHSPRFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQE 395
E+ + P + R P + G D +G H+ P ++ H L++ F + P ++
Sbjct: 240 EVKIFP--KQGKRIFSP-STGIDYETTGQHSVNSPPSTYKHRRSLNKSFATRSEPQTPRK 296
Query: 396 LRESDNRQSSTVFNPP 443
+ D+ QSS + PP
Sbjct: 297 NKIRDSLQSSPLNFPP 312
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.3 bits (60), Expect = 1.0
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +3
Query: 258 PPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFN 437
PP + PG PG +A P L S+ + P +P+ ++ +ES + ++STV N
Sbjct: 211 PPNFAPGMPAPGPTAVSASPSLQSMPPTNGVI-PGAQPSIEASIE--KESTSIRNSTVTN 267
Query: 438 PPAYEQSEPPSDTNNEQADKEPDRYRCTTKTRSRARGPRT 557
+ S + + P + TT+ + A PRT
Sbjct: 268 DRVVNTTVDVSQSQTVET-SGPSKEVPTTQPDASAAKPRT 306
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/94 (25%), Positives = 33/94 (35%)
Frame = +1
Query: 226 CYRVNATAPDSRRPTIREPTIQDPAPTQRIRPSPALDTTKSYRVRSLSRPGRTRFRNCAS 405
C + P S P + P P +RP P + SL P
Sbjct: 126 CSNNQSPFPHSHHPPLHNPLPVSCQPV--LRPPPVPQVPSHWYPVSLPSPNLPH-----Q 178
Query: 406 PTTDSPLRSSIRRPTNSPNRLPTLITNRLTKSPT 507
P + P+ ++ + PNRLP I N SPT
Sbjct: 179 PISKPPVIPNLPKLQVHPNRLPHPIHNHPYSSPT 212
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 387 LQELRESDNRQSSTVFNPPAYEQSEPPSDTNN 482
+ ++E++NR++ N A+E S+ +DTN+
Sbjct: 420 VNSIKETENREALGSINEQAFEDSKDLNDTNS 451
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.1
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 235 VNATAPDSRRPTIREPTIQDPAPTQRIRPSPALD-TTKSYRVRSLSRPGRTRFRNCASP- 408
V A + P PT+Q P PT++I + D +T S + P + N S
Sbjct: 1292 VPAVSASISTPPAVVPTVQHPQPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKM 1351
Query: 409 TTDSPLRSSIRRPTNSPNRLP 471
+ + P+R ++ PT+ ++P
Sbjct: 1352 SLEPPVRPAV--PTSPKPQIP 1370
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +1
Query: 217 RSQCYRVNATAPDSRRPTIREPTIQDPAPTQRIRPSP--ALDTTKSYRVRSLSRPGRTRF 390
RS + + P PT+ I+ P + P+ + + SY + + F
Sbjct: 516 RSPFWNFGSVEPGEITPTLYNKMIRAPLFKHEVPPTDFILIRNSSSYGSKYYLKNINHMF 575
Query: 391 RNCAS-PTTDSPLRSSIRRPTNSPNRLPTLITNRLTKSP 504
+ + P TD P S + T S NRL L+ + +SP
Sbjct: 576 VSGQTFPVTDVPGPHSRKVTTASKNRLKMLVFRLIRRSP 614
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +2
Query: 203 LXRR*DLSATGLTPQPPIPAALQSGNRRSRIRHPRSVSAPHQRWTRRRA 349
L +R ++ +P ++ +RR+R R + ++ + W RRRA
Sbjct: 877 LKKRREIDEQSTALDAVVPTGDEAIDRRNRRRLEQELAKSQKNWERRRA 925
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/55 (23%), Positives = 24/55 (43%)
Frame = +3
Query: 378 PNPLQELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRYRCTTKTRSRA 542
P ++E E +N S+T P ++ + ++ D+E + T SRA
Sbjct: 55 PTSVEENNEDENSMSTTTIEIPVVKRRNLRNQKKKKKTDEEAEDNEDTFSMNSRA 109
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.1
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 250 PDSRRPTIREPTIQDPAPTQRIRPSPALDTTKSYRVRSLSRPGRTRFRNCASPTTDSPLR 429
PDSR ++ E + A ++ +P + TKS V + N SP +
Sbjct: 220 PDSRLSSMNEMQLLASAAANQLDAAPRITPTKSSGVNLMP------LSNAPSPPKQMNVV 273
Query: 430 SSIRRPTN-SPNRLPTLITNRLTKS 501
S+ +N SPN L ++ LT +
Sbjct: 274 GSLPSSSNTSPNHLASVPNRGLTSN 298
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 394 NCASPTTDSPLRSSIRRPTNSPNRLPTLITNRLTKSPTD 510
N +PT++ P S+ RPT SP P + ++ T P D
Sbjct: 398 NFLAPTSNVPAYSTPARPTESPPP-PPISSSSTTPRPDD 435
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +1
Query: 247 APDSRRPTIREPTIQDPAPTQRIRPSPALDTTKSYRVRSLSRPGRTRFRNCASPTTDSPL 426
AP S P++ P P+P PSP + S + P RT S
Sbjct: 1241 APSSEAPSVSTPRSSVPSPHSNASPSPTSSSMAS------AAPARTSVSRSKSKAERHET 1294
Query: 427 RSSIRRPTNS 456
+S R+ + S
Sbjct: 1295 STSSRKSSKS 1304
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 315 PPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYEQSEPP 467
P L +G + P PA P P ELR + PP+ S PP
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPS-PASAPP 159
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 340 TKSYRVRSLSRPGRTRFRNCASPTTDSPLRSSIRR 444
T +V SL R R NC P+ D+P S++ +
Sbjct: 122 TAQKQVSSLVRFLRFASHNCVHPSDDAPFNSAVEK 156
>SPCC1620.09c |tfg1||transcription factor TFIIF complex alpha
subunit Tfg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 490
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 250 PDSRRPTIREPTIQDPAPTQRIRPSPALDTTKSYRVRSLSRPGRTRFRN 396
P S P +Q P + +IRP L Y + LS +RF N
Sbjct: 398 PSSVSPVKASSQLQSPNTSIQIRPQEQLINKPGYIILRLSSEKLSRFAN 446
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 250 PDSRRPTIREPTIQDPAPTQ 309
PD ++P + EP Q+ A TQ
Sbjct: 17 PDEKKPKVEEPDSQNNASTQ 36
>SPCC70.10 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 155
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 258 PPPYNPGTDDPGSGTHAAYPPLT-SVGHDEELSRP 359
PPPY+P + + A P T +V H+ S P
Sbjct: 111 PPPYSPAATASNTPQNEASPAATEAVNHERPASPP 145
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 327 SVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYEQSEPPSDTNN 482
SV L + P+ NP+ +R + N S T NP E + SDT +
Sbjct: 163 SVNESATLLQSMYVPSQANPIDAVRLASNEASGTNNNPKEIEMN---SDTTS 211
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 25.4 bits (53), Expect = 7.1
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 211 SVRSQCYRVNATAPDSRRPTIREPTIQDPAPTQRIRPS--PALDTTKSYR--VRSLSRPG 378
SV S+ Y++N+T+ DSR TI + PTQ + + P + KS + V R
Sbjct: 634 SVLSESYKLNSTSDDSR--TINRDRVHS-FPTQPLLNNNLPRMFFVKSPKKPVVFSKRSP 690
Query: 379 RTRFRNCASPTTDSPLRSSIRRPTNSPNRLPTLITNRLTKSPTDIAARRRHGREPVDPE 555
+ R R S +T S+ P + ++L + P+ A +R + +D E
Sbjct: 691 KKRVRFDDSMSTSDSGASAYNSPIQT-SKLKNMNFFNTMHMPSTPAHKRPENKNQIDVE 748
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 9.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 319 PSPA-LDT--TKSYRVRSLSRPGRTRFRNCASPTTDSPLRSSIRRPTNSPNRLPTL-ITN 486
P P+ LD K+Y S + P +RN P+ S SS R P+ PN + +
Sbjct: 343 PQPSNLDAINAKTYFQSSSNSPAPYVYRNNLPPSATSFQPSSSRSPSVDPNTVKSAQHIP 402
Query: 487 RLTKSPTDIAAR 522
R++ SP+ A +
Sbjct: 403 RMSPSPSASALK 414
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,036,901
Number of Sequences: 5004
Number of extensions: 38095
Number of successful extensions: 179
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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