Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30313
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.68 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    26   0.89 
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    24   3.6  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   4.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   4.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.3  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   8.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 302 PRSVSAPHQRWTRRRAIASVH*AGLAEPAS 391
           P+ VSAP+Q W R+ ++  +    +  PA+
Sbjct: 7   PQQVSAPYQLWPRKGSVVVMQPQPIERPAT 36


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +3

Query: 399 RESDNRQSSTVFNPPAYEQSE----PPSDTNNEQADKEP 503
           ++ DN  ++ +  P AY+Q +    PP  TN++    EP
Sbjct: 618 QQQDNTANNVIPPPSAYQQQQPPVVPPPRTNSQSQASEP 656


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 300 CRILDRRFPDCRAAG 256
           C + DRR+PD R+ G
Sbjct: 629 CGLRDRRYPDARSMG 643


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 300 CRILDRRFPDCRAAG 256
           C + DRR+PD R+ G
Sbjct: 629 CGLRDRRYPDSRSMG 643


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 249 PRFPPPYNPGTDDPGSG 299
           P  PP Y P TDD  SG
Sbjct: 412 PTHPPVYWPETDDVDSG 428


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/62 (20%), Positives = 20/62 (32%)
 Frame = +1

Query: 418  SPLRSSIRRPTNSPNRLPTLITNRLTKSPTDIAARRRHGREPVDPEHIXXXXXXXXXXYR 597
            +P     +RPT +P  +          +   I    +HG   V P +           Y 
Sbjct: 3060 NPYLKHHKRPTKTPFHIANCFRTNSADNLNTITCYEQHGLSYVFPHNTSNISGITEDHYS 3119

Query: 598  SC 603
            SC
Sbjct: 3120 SC 3121


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +3

Query: 399 RESDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRYRCTTKTRSRARG 548
           R+  N  +ST   PP  E + P S ++ E+  K+P+            RG
Sbjct: 136 RKIRNASASTT-GPPDAEANAPGSGSSLEKKKKKPNSLNAANGQSVAGRG 184


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 229 YRVNATAPDSRRPTIREPTIQDPAPTQRIRPSPAL 333
           Y+    AP+       +P I  P PT  + P P +
Sbjct: 57  YKAGKIAPNPFTAGPPKPNISIPPPTMNMPPRPGM 91


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 220 SQCYRVNATAPDSRRPTIRE 279
           ++CY    ++PDS R  IR+
Sbjct: 857 ARCYNRQQSSPDSSREAIRQ 876


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,368
Number of Sequences: 2352
Number of extensions: 10380
Number of successful extensions: 96
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)