Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30309
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 105 8e-24
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 100 2e-22
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 96 5e-21
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 89 6e-19
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 85 1e-17
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 78 1e-15
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 69 9e-13
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 42 1e-04
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 37 0.003
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 31 0.22
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.5
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 6.2
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 25 8.2
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 25 8.2
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 105 bits (251), Expect = 8e-24
Identities = 48/73 (65%), Positives = 55/73 (75%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NFKL H G LSMANAG D+NG QFFITTVKTPWLDG HVVFG+VL G D+V+KI
Sbjct: 110 NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAE 169
Query: 435 TGANDRPVKDVVI 473
T D+P++DV I
Sbjct: 170 TDNRDKPLEDVKI 182
Score = 94.7 bits (225), Expect = 1e-20
Identities = 47/85 (55%), Positives = 55/85 (64%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 180
VT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI NFM
Sbjct: 25 VTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFM 84
Query: 181 IQXXXXXXXXXXXXRSIYGERFEDE 255
IQ +SIYG RF DE
Sbjct: 85 IQGGDITKGDGTGGKSIYGSRFPDE 109
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 100 bits (240), Expect = 2e-22
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = +3
Query: 240 TF*R*NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 419
TF NF LKH G LSMANAGKD+NG QFFITTV +LDG+HVVFG+V+EG D+V++
Sbjct: 90 TFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKE 149
Query: 420 IEMTVTGANDRPVKDVVI 473
IE T GAN RP +V I
Sbjct: 150 IESTPVGANSRPKSNVAI 167
Score = 50.0 bits (114), Expect = 3e-07
Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +1
Query: 13 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 168
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGER-FEDE 255
+ FMIQ +I+ R F DE
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDE 94
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 95.9 bits (228), Expect = 5e-21
Identities = 46/75 (61%), Positives = 55/75 (73%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF LKH G LSMANAG +TNG QFFITTV TPWLDG+HVVFG+V EGMDVV+K+E
Sbjct: 85 NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVES-- 142
Query: 435 TGANDRPVKDVVISD 479
G+N + ++ D
Sbjct: 143 LGSNSGATRARIVID 157
Score = 68.1 bits (159), Expect = 1e-12
Identities = 35/79 (44%), Positives = 41/79 (51%)
Frame = +1
Query: 19 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 198
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 199 XXXXXXXXRSIYGERFEDE 255
+SIYGE+F DE
Sbjct: 66 TRGNGTGGKSIYGEKFPDE 84
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 89.0 bits (211), Expect = 6e-19
Identities = 47/78 (60%), Positives = 54/78 (69%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+LKH LSMANAG +TNG QFFITTV TP LDG+HVVFGKV++G V+ IE
Sbjct: 90 NFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLE 149
Query: 435 TGANDRPVKDVVISDTKT 488
T ND PV VVI + T
Sbjct: 150 T-KNDDPVVPVVIEECGT 166
Score = 68.9 bits (161), Expect = 7e-13
Identities = 41/86 (47%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 177
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 178 MIQXXXXXXXXXXXXRSIYGERFEDE 255
M+Q SIYGE+FEDE
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDE 89
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 85.0 bits (201), Expect = 1e-17
Identities = 36/70 (51%), Positives = 51/70 (72%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 443
L H GAG LSMANAG +TN QFFIT TPWLDG+H +FG+V+ G+ V +++ + T +
Sbjct: 80 LHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDS 139
Query: 444 NDRPVKDVVI 473
+DRP++ + I
Sbjct: 140 SDRPIEPLKI 149
Score = 51.6 bits (118), Expect = 1e-07
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 222
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 223 RSIYGERFEDETSS 264
SIYG++F+DE S
Sbjct: 65 TSIYGDKFDDEIHS 78
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 78.2 bits (184), Expect = 1e-15
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 443
LKH +SMAN+G +TNG QFFITT TPWLDG+H +F + G+DVV +IE T
Sbjct: 533 LKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDK 592
Query: 444 NDRPVKDVVI 473
DRP++ I
Sbjct: 593 YDRPLEPTKI 602
Score = 41.9 bits (94), Expect = 9e-05
Identities = 28/71 (39%), Positives = 35/71 (49%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 228
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 229 IYGERFEDETS 261
I+ + FEDE S
Sbjct: 520 IWKKDFEDEIS 530
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 68.5 bits (160), Expect = 9e-13
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 443
LKH G +SMAN GK+TNG QFFI LD +H +FG+V+ G++V+ +E T +
Sbjct: 354 LKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNS 413
Query: 444 NDRPVKDVVISD 479
ND P + + D
Sbjct: 414 NDHPKLPIKLED 425
Score = 35.5 bits (78), Expect = 0.008
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 222
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 223 RSIYGERFEDE 255
+SI+G+ F+DE
Sbjct: 339 QSIWGKPFKDE 349
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 41.5 bits (93), Expect = 1e-04
Identities = 30/70 (42%), Positives = 34/70 (48%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 228
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 229 IYGERFEDET 258
IYGE F ET
Sbjct: 78 IYGEPFAVET 87
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 261 KLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVT 437
+L+ G + MA + N QFFIT TP +G+ +FG+V+ + + V +I
Sbjct: 90 RLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELEL 149
Query: 438 GANDRPV 458
AN RPV
Sbjct: 150 DANQRPV 156
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 37.1 bits (82), Expect = 0.003
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANA---GKDTN----GXQFFIT-TVKTPWLDGRHVVFGKVLEGMDV 410
N L H G +SM+ A +D G QF IT + LD R+ ++G+V EG D
Sbjct: 83 NPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQVAEGFDT 142
Query: 411 VQKIEMTVTGANDRPVKDVVISDT 482
+ KI + +P +D+ I T
Sbjct: 143 LLKINDAICDEEGQPYRDIRIKHT 166
Score = 32.3 bits (70), Expect = 0.071
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 37 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 30.7 bits (66), Expect = 0.22
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -2
Query: 532 VSTLFCDTKGS----ATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTT 374
V T+ T GS TT+V+V+++ T G PVT SIF T + + T +T+
Sbjct: 450 VPTVSSSTTGSLHYKTTTTVWVTEVFTRYLGDDSTPVTSSSIFSTATEATDTSVQTS 506
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 541 INLVSTLFCDTKGSATTSVFVSDITTSLTGRSFA--PVTVISIFCTTSIPSKTLPKTTCL 368
I L ST T +++TS+ S +T+ + SFA + S T+S T P TT
Sbjct: 639 IPLTSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPPPTTSF 698
Query: 367 PS 362
PS
Sbjct: 699 PS 700
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = -2
Query: 502 SATTSVFVSDITTSLTGRSFAPVTVISIFCT--TSIP---SKTLPKTTCLP 365
+++TS+ + +TS T + +P+ S CT TSIP + T P T +P
Sbjct: 256 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 6.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 225 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 73
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 360 LDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEV 494
L G H + G+ L +D + I TV + ++ SDT T++
Sbjct: 109 LSGSHTLTGEALSILDSIPSIAYTVPDLDAVVTINIYESDTNTQL 153
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 528 LTKFIINVLMINIFMRMHLLDFYVIFIYHY 617
L FII L I + + + LL+F + FI Y
Sbjct: 211 LITFIIGFLPITVLVAISLLEFGIAFIQAY 240
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,529,416
Number of Sequences: 5004
Number of extensions: 50838
Number of successful extensions: 151
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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