Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30309
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 97 1e-20
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 2e-20
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 85 7e-17
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 84 1e-16
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 73 2e-13
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 66 2e-11
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 55 5e-08
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.014
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 35 0.076
SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 32 0.53
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_20193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3) 29 3.8
SB_39340| Best HMM Match : DUF1656 (HMM E-Value=2.9) 28 6.6
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 113 bits (273), Expect = 1e-25
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF LKHYG GWL MANAGK+TNG QF+ITT+KT WLDG H FGKVLEGMDVV++IE T
Sbjct: 109 NFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIENTR 168
Query: 435 TGANDRPVKDVVISDTKTEVVAEP 506
+D+P+ +V I+ + + P
Sbjct: 169 VDTHDKPLDEVKITGIGSIPIESP 192
Score = 89.0 bits (211), Expect = 3e-18
Identities = 50/112 (44%), Positives = 60/112 (53%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 180
VT KV D+ IG G +++GLFG T PKT NF LA K +G GYK S FHRVIKNFM
Sbjct: 24 VTKKVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFM 83
Query: 181 IQXXXXXXXXXXXXRSIYGERFEDETSS*STMVLVGYLWLMQAKTQMDXNFS 336
IQ SIYG+ F+DE + + G WL A + N S
Sbjct: 84 IQGGDFTNKDGTGGYSIYGKYFDDENFN---LKHYGPGWLCMANAGKNTNGS 132
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 111 bits (267), Expect = 5e-25
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDV 410
NFKL+HYGAGWLSMANAGKDTNG QFFITTVKTPWLDGRHVVFGKVL+GM+V
Sbjct: 128 NFKLQHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
Score = 54.0 bits (124), Expect = 1e-07
Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFG-------------KTVPKTTENFFQL-----AQKP 126
VT KV FD+ IG + G I IGLF +++ T +F +
Sbjct: 25 VTKKVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQ 84
Query: 127 EGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDETSS*STMVLVGYLWLMQ 306
+G GYK S FHRVI++FMIQ +SIYG++F DE + G WL
Sbjct: 85 KGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFK---LQHYGAGWLSM 141
Query: 307 AKTQMDXNFS 336
A D N S
Sbjct: 142 ANAGKDTNGS 151
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF LKH GAG LSMAN+G +TNG QFF+TT KT WLDG+HVVFG V+EG DVV+K+E V
Sbjct: 220 NFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKME-AV 278
Query: 435 TGANDRPVKDVVISD 479
+ + K VVI D
Sbjct: 279 GSQSGKASKKVVIDD 293
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/85 (44%), Positives = 47/85 (55%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 180
V +V FD+ IG+ + G IV+ L VP T ENF L +G GYKGS FHR+I FM
Sbjct: 135 VNPRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFM 194
Query: 181 IQXXXXXXXXXXXXRSIYGERFEDE 255
Q +SIYG +FEDE
Sbjct: 195 CQGGDFTKHNGTGGKSIYGAKFEDE 219
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 96.7 bits (230), Expect = 2e-20
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = +3
Query: 294 MANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 473
MANAGKDTNG QFFITTVKT WLDG+HVVFGKVLEGMDVV+K+E V PVK +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE-NVNVKGSTPVKTCMI 59
Query: 474 SDTKTEVVAEPLVSQK 521
D+ T + +P +K
Sbjct: 60 DDSGTLPLDKPFNVEK 75
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 95.5 bits (227), Expect = 4e-20
Identities = 48/82 (58%), Positives = 58/82 (70%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF LKH G G LSMANAG TNG QFF+ T KT WLDG+HVVFG V +GMDVV+KIE V
Sbjct: 86 NFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIE-KV 144
Query: 435 TGANDRPVKDVVISDTKTEVVA 500
+ + K VVI+D+ + + A
Sbjct: 145 GSDSGKTSKKVVIADSASVLQA 166
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/79 (46%), Positives = 43/79 (54%)
Frame = +1
Query: 19 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 198
FD++IG G IV+ L VPKT ENF L +G GYKGS FHRVI FM Q
Sbjct: 7 FDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDF 66
Query: 199 XXXXXXXXRSIYGERFEDE 255
+SIYG +F DE
Sbjct: 67 TRGDGTGGKSIYGAKFADE 85
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 84.6 bits (200), Expect = 7e-17
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG- 440
L+H +SMANAG +TNG QFFIT V TPWLD +H VFG+V++GMDV Q+I + T
Sbjct: 22 LRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKGMDVAQQISLVKTNP 81
Query: 441 ANDRPVKDVVI 473
ND+P +D+ I
Sbjct: 82 KNDQPYEDIKI 92
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 267 KHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMT 431
+H G LSMAN+G +TNG QFFITTV TP LDGRHVVFGKVL+GMDVV+++E T
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEAT 242
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 288 LSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 422
LSMANAG TNG QFF+ T KT WLDG+HVVFG V +GMDVV+K+
Sbjct: 3 LSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
+F + H G + MAN G+ TNG QF+IT PW+D ++V FG+V+EG++V+ +E
Sbjct: 61 DFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEGLNVLDVLEGQE 120
Query: 435 TGANDRPVKDVVISD 479
T N+RP + ++D
Sbjct: 121 T-FNERPKVECRVAD 134
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = +3
Query: 258 FKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 437
F+ KH LSMAN G +TNG QFFI HVVFG V++G ++V++IE T
Sbjct: 42 FEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFGHVIQGEELVRQIESLPT 91
Query: 438 GANDRPVKDVVISD 479
+RP DV +S+
Sbjct: 92 NEKNRPNADVKVSN 105
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 261 KLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVL 395
+ H G +SMAN G ++NG QFFI K P LD ++ +FGK L
Sbjct: 298 RCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYL 342
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 372 HVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 479
HVVFG V++G ++V++IE T +RP DV +S+
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSN 38
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 35.9 bits (79), Expect = 0.033
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +3
Query: 270 HYGAGWLSMANAG-KDTNGXQFFITTVKTPWLDGR-----HVVFGKVLEGMDVVQKIEMT 431
H G L+MA +D+ QFFI +LD + VFGKV++GMDVV KI
Sbjct: 101 HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKIAQV 160
Query: 432 VT 437
T
Sbjct: 161 PT 162
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
++G I I L P +T NF LA G Y G++FHRVI FM+Q
Sbjct: 31 SLGEIEIELDADKAPISTANF--LAYVDSGY-YAGTQFHRVIPGFMVQ 75
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 34.7 bits (76), Expect = 0.076
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 171
++G I I L+GK PK NF QL EG Y + FHR++K
Sbjct: 11 SVGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIVK 50
>SB_45173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 565 ILIIKTFIINLVSTLFCDTKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 401
I II T II ++ T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 190 ITIIITIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 244
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 565 ILIIKTFIINLVSTLFCDTKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSI 401
I II T II ++ T+ + TTS+ + I T T S + +I+I TTSI
Sbjct: 244 ITIIITIIITILITIIITITITTTTSITIIIIITITTTTSITIIIIITITTTTSI 298
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHR 162
G ++ LF VPKT ENF L +G G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 31.1 bits (67), Expect = 0.93
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = -2
Query: 565 ILIIKTFIINLVSTLFCDTKGSATTSVFVSDITTSLTG--RSFAPVT--VISIFCTTSIP 398
+ +IK+ ++S+L T T++F +T SLT S P + +S T++P
Sbjct: 899 VSVIKSTTFEILSSLSSFTSAHVPTTLFEVILTPSLTSFFESTIPYSTLTLSTISDTNLP 958
Query: 397 SKTLPKTTCLPSNQGVLTVVMKN*XPFVSLPALAIDN 287
+ T T +P+N ++ ++ P ++L ++ I N
Sbjct: 959 NITTVNRTTVPTNSTLVEILPS--MPTMNLTSVPILN 993
>SB_20193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 459 KDVVISDTKTEVVAEPLVSQKRVLTKFIINVLMINIFMRMHLLDFYVIFIYHYGNKK 629
K+ I + K +VV K LT I N+++ + + L+ V+F +HY N+K
Sbjct: 116 KNFTIVEYKEKVVPTRTTGGKVHLTSNI-NIIVGIVLATLLLITILVLFFWHYNNRK 171
>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
Length = 531
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 529 STLFCDTKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTTCLPSN 359
+T T +A T+ T+LT + AP T + TT+ + T P TT P+N
Sbjct: 13 ATTTAPTTATAPTTTTAPTTNTALTTTT-APTTTTAPTTTTAPTTTTAPTTTTTPNN 68
>SB_39340| Best HMM Match : DUF1656 (HMM E-Value=2.9)
Length = 225
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = -2
Query: 541 INLVSTLFCDTKGSATTSVFVSDIT-TSLTGRSFAP-VTVISIFCTTSIPSKTLPKTTCL 368
+ V+ + T S T V IT S+T P +T+ S+ C T +P TL TC+
Sbjct: 66 VTCVTGVLYITLASVTCFTGVPHITLASVTCVKGVPYITLASVTCVTGVPYITLTSVTCV 125
Query: 367 PSNQGV--LTVVMKN*XPFVSLPALA 296
+ +V P+++L ++A
Sbjct: 126 TGVPYITLASVACVTGVPYITLASVA 151
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 469 TTSLTGRSFAPVTVISIFCTTSIP-SKTLPKTTCLPSNQGV 350
TTS+ + AP T S+ TT+ P + TLPKTT P V
Sbjct: 2835 TTSVPKTTAAPETT-SVPKTTAAPETTTLPKTTAAPETTSV 2874
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,086,689
Number of Sequences: 59808
Number of extensions: 364657
Number of successful extensions: 748
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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