Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30309
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 108 3e-24
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 103 9e-23
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 103 2e-22
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 99 1e-21
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 99 1e-21
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 98 6e-21
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 95 4e-20
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 92 3e-19
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 90 1e-18
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 90 1e-18
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 90 2e-18
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 89 4e-18
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 89 4e-18
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 88 5e-18
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 87 8e-18
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 86 3e-17
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 86 3e-17
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 80 1e-15
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 61 8e-10
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 58 8e-09
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 50 2e-06
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 48 6e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 48 6e-06
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 40 0.002
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 39 0.004
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 31 0.76
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 29 4.1
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 28 5.4
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 108 bits (260), Expect = 3e-24
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +3
Query: 240 TF*R*NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 419
TF NFKL H G G LSMANAG +TNG QFFI T+KT WLDGRHVVFG+V+EGM+VV+
Sbjct: 171 TFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKL 230
Query: 420 IEMTVTGANDRPVKDVVISD 479
IE T DRP K VVI+D
Sbjct: 231 IEEQETDRGDRPRKKVVIAD 250
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIK 171
+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI+
Sbjct: 88 ITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIR 147
Query: 172 NFMIQXXXXXXXXXXXXRSIYGERFEDE 255
+FMIQ +S+YG F+DE
Sbjct: 148 DFMIQGGDFEKGNGTGGKSVYGRTFKDE 175
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 103 bits (248), Expect = 9e-23
Identities = 51/76 (67%), Positives = 57/76 (75%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NFKLKH G G+LSMANAG+DTNG QFFITTV T WLDGRHVVFGKV+ GMDVV K+E
Sbjct: 125 NFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE-AE 183
Query: 435 TGANDRPVKDVVISDT 482
+ P VVI D+
Sbjct: 184 GNQSGTPKSKVVIVDS 199
Score = 84.6 bits (200), Expect = 6e-17
Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 159
+THKV FD++I G IV+GLFGKTVPKT ENF L +G G YKGS FH
Sbjct: 33 ITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFH 92
Query: 160 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
R+I +FM+Q SIYGE+F DE
Sbjct: 93 RIIPSFMLQGGDFTHGNGMGGESIYGEKFADE 124
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 103 bits (246), Expect = 2e-22
Identities = 51/76 (67%), Positives = 58/76 (76%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NFKLKH G G LSMAN+G+DTNG QFFITTV T WLDGRHVVFGKV++GMDVV KIE
Sbjct: 122 NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE-AE 180
Query: 435 TGANDRPVKDVVISDT 482
+ P VVI+D+
Sbjct: 181 GKQSGTPKSKVVIADS 196
Score = 87.0 bits (206), Expect = 1e-17
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 159
VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G YKGSKFH
Sbjct: 30 VTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFH 89
Query: 160 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
R+I +FMIQ SIYG++F DE
Sbjct: 90 RIIPSFMIQGGDFTHGNGMGGESIYGQKFADE 121
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 99 bits (238), Expect = 1e-21
Identities = 47/75 (62%), Positives = 59/75 (78%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+ KH G G LSMANAG +TNG QFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE V
Sbjct: 94 NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KV 152
Query: 435 TGANDRPVKDVVISD 479
++ +P K VV++D
Sbjct: 153 GSSSGKPTKPVVVAD 167
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
NFM Q SIYG +FEDE
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDE 93
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 99 bits (238), Expect = 1e-21
Identities = 47/75 (62%), Positives = 59/75 (78%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+ KH G G LSMANAG +TNG QFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE +
Sbjct: 95 NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KI 153
Query: 435 TGANDRPVKDVVISD 479
++ +P K VVI+D
Sbjct: 154 GSSSGKPTKPVVIAD 168
Score = 67.3 bits (157), Expect = 9e-12
Identities = 40/89 (44%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
NFM Q SIYG +FEDE
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDE 94
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 425
NFKLKH G G+LSMAN+G D+NG QFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 149 NFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFH 159
VTHKV FD++I G I+IGLFG VPKT ENF L +G G +KGS FH
Sbjct: 57 VTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFH 116
Query: 160 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
R+I FMIQ SIYG++F DE
Sbjct: 117 RIIPGFMIQGGDFTRGDGRGGESIYGDKFADE 148
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 443
L+H LSMANAG +TNG QFFITTV TPWLD +H VFG+V++GMDVVQ IE T
Sbjct: 554 LRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDK 613
Query: 444 NDRPVKDVVI 473
NDRP +DV I
Sbjct: 614 NDRPYQDVKI 623
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +1
Query: 46 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 225
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQ-TGDPLGDGTGGQ 539
Query: 226 SIYGERFEDE 255
SI+G FEDE
Sbjct: 540 SIWGREFEDE 549
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF LKH G G LSMANAG +TNG QFFI TVKT WLD +HVVFG+V+EGM +V+ +E
Sbjct: 178 NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQE 237
Query: 435 TGANDRPVK 461
T A D P K
Sbjct: 238 TRAFDVPKK 246
Score = 90.6 bits (215), Expect = 9e-19
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 180
VT+KV FD++IG + G IV+GLFG+ VPKT ENF L + GYKGS FHR+IK+FM
Sbjct: 93 VTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFM 152
Query: 181 IQXXXXXXXXXXXXRSIYGERFEDE 255
IQ SIYG +FEDE
Sbjct: 153 IQGGDFTEGNGTGGISIYGAKFEDE 177
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 90.2 bits (214), Expect = 1e-18
Identities = 45/75 (60%), Positives = 54/75 (72%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NFKLKH G G LSMAN+G +TNG QFFI T KT WLDG+HVVFGKV++G +VV+ +E V
Sbjct: 94 NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAME-DV 152
Query: 435 TGANDRPVKDVVISD 479
P + VVI D
Sbjct: 153 GSDMGNPSERVVIED 167
Score = 62.5 bits (145), Expect = 3e-10
Identities = 36/89 (40%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
FM Q SIYG +FEDE
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDE 93
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 90.2 bits (214), Expect = 1e-18
Identities = 46/75 (61%), Positives = 55/75 (73%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF KH G G LSMANAG +TNG QFFI T KT WLDG+HVVFG+V+EG++VV+ IE V
Sbjct: 95 NFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIE-KV 153
Query: 435 TGANDRPVKDVVISD 479
+ R K VVI+D
Sbjct: 154 GSDSGRTSKPVVIAD 168
Score = 67.3 bits (157), Expect = 9e-12
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
FM Q SIYG +F+DE
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDE 94
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 89.8 bits (213), Expect = 2e-18
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = +3
Query: 240 TF*R*NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 419
TF NFK++H AG ++MAN G D+NG QFFITTVK WL+G HVV GKV++GMD V
Sbjct: 132 TFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFA 191
Query: 420 IEMTVTGANDRPVKDVVISDT 482
IE + +P K VVI+D+
Sbjct: 192 IEGGAGTYSGKPRKKVVIADS 212
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +1
Query: 1 VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE-------GYKGSKFH 159
+T++V D+ I +G IVIGL+G VPKT ENF L +G+ YKG+ FH
Sbjct: 45 ITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFH 104
Query: 160 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
R+I F+IQ SIYG F DE
Sbjct: 105 RIISGFVIQGGDIIHGDGKSSDSIYGGTFPDE 136
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMT 431
NF KH G G LSMAN+G +TNG QFFIT K WLD +HVVFG+VL +G+ V++KIE
Sbjct: 120 NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENV 179
Query: 432 VTGANDRPVKDVVISD 479
G N+RP VVI++
Sbjct: 180 AIGPNNRPKLAVVITE 195
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/86 (43%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +1
Query: 13 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGSKFHRVIKNF 177
V FD+ IG G I + LF PKT ENF Q + G+ GYK +FHRVIK+F
Sbjct: 34 VFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDF 93
Query: 178 MIQXXXXXXXXXXXXRSIYGERFEDE 255
M+Q SIYG +FEDE
Sbjct: 94 MVQSGDFLKNDGSGCMSIYGHKFEDE 119
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
N +LKH GAG LSMANAG +TNG QFFIT P LDG+H +FG+V GM+V++++
Sbjct: 85 NKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQ 144
Query: 435 TGANDRPVKDVVISDTK 485
T DRP+ +V I TK
Sbjct: 145 TDNTDRPIHEVKILRTK 161
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +1
Query: 37 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 216
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQ-GGDPTGTGR 70
Query: 217 XXRSIYGERFEDE 255
SIYG +FEDE
Sbjct: 71 GGESIYGSKFEDE 83
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 88.2 bits (209), Expect = 5e-18
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+LKH G LSMAN+G +TNG QFFITT +T LDG+HVVFG+V +GM VV+ IE
Sbjct: 95 NFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVS 154
Query: 435 TGANDRPVKDVVISD 479
P +DVVI D
Sbjct: 155 IEEQSCPSQDVVIHD 169
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 165
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 166 IKNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
IK FMIQ SIYG +F+DE
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDE 94
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 87.4 bits (207), Expect = 8e-18
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF KH GAG LSMAN+G +TNG QFFI T KT WLDG+HVVFG+V++G+DVV+ IE V
Sbjct: 94 NFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIE-KV 152
Query: 435 TGANDRPVKDVVISD 479
+ + K V I+D
Sbjct: 153 GSDSGKTSKVVTITD 167
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
FM Q SIYG +F+DE
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDE 93
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 85.8 bits (203), Expect = 3e-17
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+L H GAG LSMAN G +TNG QFFI + P LDG+HVVFGKV+EGM V++K+E+
Sbjct: 98 NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVG 157
Query: 435 TGANDRPVKDVVISD 479
T ++ +P V I D
Sbjct: 158 T-SDGKPTSPVKIID 171
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/89 (43%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +1
Query: 13 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 168
V D+ IG D + IVI LF VPKT ENF L G G +KGS FHRVI
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVI 68
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
K FM Q SIYG +F DE
Sbjct: 69 KGFMAQGGDFSNGNGTGGESIYGGKFSDE 97
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 85.8 bits (203), Expect = 3e-17
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
NF+L H GAG LSMAN G +TNG QFFI + P LDG+HVVFGKV+EGM V++K+E+
Sbjct: 98 NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVG 157
Query: 435 TGANDRPVKDVVISD 479
T ++ +P V I D
Sbjct: 158 T-SDGKPTSPVKIID 171
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/89 (43%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +1
Query: 13 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVI 168
V D+ IG D + IVI LF VPKT ENF L G G +KGS FHRVI
Sbjct: 9 VFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVI 68
Query: 169 KNFMIQXXXXXXXXXXXXRSIYGERFEDE 255
K FM Q SIYG +F DE
Sbjct: 69 KGFMAQGGDFSNGNGTGGESIYGGKFSDE 97
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA 443
LKH G LSMAN+G +TNG QFFIT K P L+G + +FGKV+ G +V+ +E T TG
Sbjct: 79 LKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGP 138
Query: 444 NDRPVKDVVISDTKTEVVAEPL 509
DRP+ ++ ++ + + A PL
Sbjct: 139 GDRPLAEIRLN--RVTIHANPL 158
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/71 (39%), Positives = 35/71 (49%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 222
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPKGTGKGG 63
Query: 223 RSIYGERFEDE 255
SI+G++F DE
Sbjct: 64 TSIWGKKFNDE 74
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +3
Query: 255 NFKLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTV 434
N KL H G G +SMAN+G TNG QFF+ L+ +H VFG V+ G+ + +E
Sbjct: 419 NSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVP 478
Query: 435 TGANDRPVKDVVISDTKTEV 494
+DRP++++ I + V
Sbjct: 479 VDESDRPLEEIKIIEASVFV 498
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/72 (36%), Positives = 35/72 (48%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 228
G + I L P+ ENF L ++ Y G FHR I+NFMIQ S
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQ-GGDPTGTGKGGES 408
Query: 229 IYGERFEDETSS 264
I+G+ F+DE +S
Sbjct: 409 IWGKPFKDEPNS 420
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQFFITTVKT-PWLDGRHVVFGKVLEGMDVVQKIEMTVTG 440
LKH G ++MA+ G++ N QF+ T +LDG+H VFG++ EG D + +I
Sbjct: 86 LKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVD 145
Query: 441 ANDRPVKDVVISDT 482
+RP K++ I T
Sbjct: 146 PKNRPYKNIRIKHT 159
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 43 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQ 52
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 165
+V D+ I D T+V LF + PKT+ENF L +G G YKGS FHR+
Sbjct: 8 QVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRI 67
Query: 166 IKNFMIQXXXXXXXXXXXXRSIYGERFEDET 258
+K Q SIY +F DE+
Sbjct: 68 MKGSSAQAGDFVNRNGTAGESIYAGKFPDES 98
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 261 KLKHYGAGWLSMANAGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 425
KL+H G LSM+ A +D G F IT LD +VVFGK+++G ++++KIE
Sbjct: 100 KLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 261 KLKHYGAGWLSMANAGK-DTNGXQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTV 434
+L+ G ++MANA ++NG QFF T K WLD +H +FGKV + + + ++
Sbjct: 90 RLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVD 149
Query: 435 TGANDRPVKDVVISDTKTEVVAEPLVS-QKRVLTK 536
T +DRP+ D EV+ P RVL K
Sbjct: 150 TSKDDRPL-DPAPKILSVEVLWNPFEDIVPRVLAK 183
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 225
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 226 SIYGERFEDETSS 264
SIYG F DE S
Sbjct: 77 SIYGGVFADEFHS 89
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 48.0 bits (109), Expect = 6e-06
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 258 FKLKHY-GAGWLSMANAGKDTNGXQFFITTVKTPW-LDGRHVVFGKVLEGMDVVQKIEMT 431
F L H G G +SMA D+NG QF I +DG HVV GKV+EG+D+++ IE
Sbjct: 91 FILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKE 146
Query: 432 VTGANDR-PVKDVVISD 479
V R P K VVI+D
Sbjct: 147 VITTTTRTPSKPVVIAD 163
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 10 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 168
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 169 KNFM 180
+ M
Sbjct: 65 PDLM 68
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 318 NGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE--MTVTGANDRPVKDV--VISDTK 485
NG +F IT V +P L+ +V GKVLEGM VV+K+ TV P V VI D K
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTSSPYFRVAKVIGD-K 288
Query: 486 TEVVAE 503
VVAE
Sbjct: 289 RAVVAE 294
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 4 THKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 180
T K D+ I + IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 91 TKKAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 327 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 476
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 327 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 476
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 327 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVIS 476
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + I+
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGIT 228
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 49 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 186
G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 312 DTNGXQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 437
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 46 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 165
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 303 AGKDTNGXQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVI 473
A + G +FFI + + L+ + VFG+V +G DVVQ+IE T +P + I
Sbjct: 165 AKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEI 221
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 37 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 186
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 31.1 bits (67), Expect = 0.76
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Frame = +3
Query: 264 LKHYGAGWLSMANAGKDTNGXQ--FFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 437
+KH G LSM D N Q F + P LD ++ VFGKV +G + + K+E T
Sbjct: 114 VKHV-RGTLSMGRYD-DPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPT 171
Query: 438 ---GANDRPVKDVVI-----SDTKTEVVAEPLVSQKRVLTKFIINV 551
G P + + I DTK E E KR L + V
Sbjct: 172 RREGIFVMPTERITILSTYYYDTKMESCEEERSVLKRRLQASFVEV 217
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 487 VFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKT 377
V VS T+ G SF+P ++ + C + PSKT +T
Sbjct: 19 VAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = -1
Query: 482 RVRYNNIFDWAIIRTRNS--------HLNFLYNIHSF*NFTENNMSAI*PGCLNSCDEKL 327
++ Y+ +FDW + + NS H+ + +I+ F +F N+ C+N +EKL
Sbjct: 401 KIVYSKLFDWLVTKINNSIGQDPNSKHIIGVLDIYGFESFKTNSFEQF---CINLTNEKL 457
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,892,646
Number of Sequences: 28952
Number of extensions: 255849
Number of successful extensions: 648
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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