Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30308
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.011
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 33 0.026
SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyc... 31 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 30 0.32
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 0.42
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.42
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.74
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 29 0.74
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.97
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 28 0.97
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 28 1.3
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 28 1.3
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 28 1.3
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 2.3
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 27 3.0
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 27 3.0
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 3.0
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 27 3.0
SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces pomb... 26 3.9
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 26 3.9
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 26 5.2
SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 26 5.2
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 26 5.2
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 5.2
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 26 5.2
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 25 6.9
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 25 6.9
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 25 6.9
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 25 9.1
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 25 9.1
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 25 9.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.1
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 9.1
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.1
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 25 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.011
Identities = 30/93 (32%), Positives = 38/93 (40%)
Frame = +1
Query: 1 PLHAPDARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSM 180
P AP S P P+PT AP AP APS+ P S PH S SP
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVST-PRSSVPSPH---SNASPSPT 1268
Query: 181 NSRVSLHAMDSRIPPHHLESRIPPVRHRTDLDS 279
+S ++ A +R +S+ RH T S
Sbjct: 1269 SSSMA-SAAPARTSVSRSKSKAE--RHETSTSS 1298
Score = 30.7 bits (66), Expect = 0.18
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +1
Query: 52 PLPTH---SAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSP-HSMNSRVSLHAMDSR- 216
PLP S+P S P H PS PL S P L +RV P ++S+ + S
Sbjct: 972 PLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPL-ARVPPVPKLSSKAPPVPLPSAD 1030
Query: 217 IPPHHLESRIPPVRHRTDLDSIRRDSACHP 306
PP + S PPV T + + S+ P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAP 1060
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 PLHAPDARVTSHQTPEAPLPTHSAPESRAPPHHAPS--IPLHPLDSRVPP 144
P+ AP + + P A +P P S APP PS +P P S PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 225 PSFGIAHSTSPSPHGPGFNPARLSVSPANQS-MQTTKSRSPSAGPRPSTPGS 377
PS S+ PSPH +P+ S S A+ + +T+ SRS S R T S
Sbjct: 1247 PSVSTPRSSVPSPHS-NASPSPTSSSMASAAPARTSVSRSKSKAERHETSTS 1297
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 33.5 bits (73), Expect = 0.026
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 43 PEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSM--NSRVSLHAMDSR 216
P P H P +R PPHH P H ++ PP+ S VSP + S + D+
Sbjct: 161 PPFPPTQHHHPHTR-PPHHPPHPHFHN-NNYPPPYCFQSPVSPGATVPLQHHSPYPSDNG 218
Query: 217 IPPHHLESRIPP 252
P H ++ P
Sbjct: 219 FPGHRRQTHFAP 230
>SPAC16C9.04c |||CCR4-Not complex subunit Mot2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 489
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 28 TSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSMNSRV 192
T++ P P SA P HA +I H S +PP +++SP + R+
Sbjct: 310 TNNTATSVPAPYSSAASVNVVPGHATTILHHEESSALPPTAAWAKLSPSVLQERL 364
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.18
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 PLHAPDARVTSHQTPEAPLPTHSAPE-SRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHS 177
P+ P R S P+ PT P S PP AP +P P + PP S S +
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 178 MNSRVSL 198
R +L
Sbjct: 1746 PGDRSAL 1752
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 29.9 bits (64), Expect = 0.32
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 225 PSFGIAHSTSPSPHGPGF---NPARLSVSPANQSMQTTKSRSPSAGP 356
P +G+ + P PG P +S SP+ QSM T P A P
Sbjct: 201 PGYGMPSNQKPPNFAPGMPAPGPTAVSASPSLQSMPPTNGVIPGAQP 247
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.5 bits (63), Expect = 0.42
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +1
Query: 25 VTSHQTPEAPLPTHSA----PESRAPPHHAPSIPLHPLDSRVPPHLLD-SRVSPHS 177
+TS+ T + T+S P S P +AP+ P+ P S PP+LL+ SP S
Sbjct: 315 MTSNLTSNSGSMTNSTSTDLPTSNLPSQNAPARPVEPSPSIQPPNLLNLPTASPES 370
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 29.5 bits (63), Expect = 0.42
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 28 TSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSR-VPP 144
T TP PLPT ++P+ PH P R VPP
Sbjct: 416 TQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPP 455
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 0.74
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 219 STPSFGIAHSTSPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTPGSE 380
S P + S SP+P GP N SV + +S + S + G S P SE
Sbjct: 763 SQPQLSMQRSVSPNPLGP--NRRSSSVLQSQKSTSSNTSNRNNGGYSGSRPSSE 814
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 28.7 bits (61), Expect = 0.74
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +1
Query: 502 DHRGITGAGSPGPTPEPLRHPKIKHTENKGPATAKTRLAR 621
D R T A P P P+ KIK E KGP K RL R
Sbjct: 15 DSRSSTPATGP---PPPIPKIKIKTREPKGPRLTKIRLKR 51
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 0.97
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 120 SARLAGSTASLRLSRFSAFNELTRVAARNGFPHSTPSFGIAHSTSPSP-HGPGFNPARLS 296
S+ S+ L S FS+ + T + + S+ +F A TS S + + S
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSS 219
Query: 297 VSPANQSMQTTKSRSPSAGPRPSTPGSEAS 386
SP++ S T S S S PST S +S
Sbjct: 220 SSPSSSSSSTLTSSSLSTSSIPSTSSSSSS 249
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 28.3 bits (60), Expect = 0.97
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 LSVSPANQSMQTTKSRSPS-AGPRPSTPGSEAS 386
L V+P+N+ +T +S SP+ + P+PS P +S
Sbjct: 214 LPVAPSNEDQRTMESTSPTDSQPQPSAPNLVSS 246
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 219 STPSFGIAHSTSPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTP 371
++P+F + +++PS +P ++ P+ + S S S+ PR S+P
Sbjct: 383 ASPAFPNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRTSSP 433
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 19 ARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSMNSRVSL 198
AR S+ P+P+ + S P+ PS+PL+P S + ++++ P S S+
Sbjct: 195 ARPMSNLQASQPVPSSTFSRSAVVPN--PSLPLNP--SVLQGQVMNNPTIPKGTPS-TSI 249
Query: 199 HAMDSRIPPHH 231
+ IPP H
Sbjct: 250 EGAKTSIPPSH 260
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 13 PDARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPP 144
P+AR S T P+P S R PP P++P + S PP
Sbjct: 86 PEARYNS--TIHNPMPPMSQAY-RPPPTEPPTVPAYETSSEFPP 126
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 2.3
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 132 AGSTASLRLSRFSAFNEL-TRVAARNGFPHSTPSFGIAHSTSPSPHGPGFNPARLSVSPA 308
A T+ S S+ N + T V N + S A S+S S P + SVS A
Sbjct: 202 ATHTSQFSTSSSSSVNSVHTPVMVPNPYFQYNSSM-TAPSSSSSSVAPFVPRRQFSVSSA 260
Query: 309 NQSMQTTKSRSPSAGPRPS 365
+ QT S SP P PS
Sbjct: 261 SDPPQTPISMSPPIPPTPS 279
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 55 LPTHSAPESRAPPHH---APSIPLHPLDSRVP 141
+ T P+S APP +PS PLH + S +P
Sbjct: 459 IQTSGRPKSMAPPSPSPISPSFPLHEIQSPMP 490
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 10 APDARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPPHL 150
+P+A TS + A LP + + HH P P P + P +L
Sbjct: 263 SPEAHRTSIYSYSANLPNYYNEHNELHEHHNPQTPSSPESAYSPENL 309
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 26.6 bits (56), Expect = 3.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 PLHAPDARVTSHQTPEAPLPTHSAPESRAPPHHAPSIPLHPLDSRVPP-HLLDSRVSPHS 177
PL +++V S +TP A TH+AP+ A + L P H + +V P +
Sbjct: 346 PLSVSNSKVASPETPNA---THTAPKVEMRYASAAAAAAAALAKESPSHHYIMQQVRPET 402
Query: 178 MNS 186
NS
Sbjct: 403 PNS 405
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 26.6 bits (56), Expect = 3.0
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +1
Query: 70 APESRAPPHHAPSIPLHPLDSRVPPHLLDSRVSPHSMNSRVSLHAMDSRIPPHHLESRIP 249
AP AP H +P H S VPP L S V + VS S+ P S +P
Sbjct: 265 APSFAAPQAHP--LPSHLSQSNVPPQLSHSSVPSPAPPRSVSQPTYFSQPMPQFSSSFVP 322
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 3.0
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 QTPEAPLPTHSAPESRAPPHHAPSIPLHP-LDSRVPPHLLDSRVSPHSMNSRVSLHAMDS 213
QT P H+ S PP H P LHP L + P + P N + ++
Sbjct: 37 QTAYYASPLHANSVS-LPPSHLPRSTLHPLLSQQQQPAQQSPSLGPAQQNIQ-QPPSVSI 94
Query: 214 RIPPHHLESRIP 249
PH+ E+ +P
Sbjct: 95 ASQPHYAEAIVP 106
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 191 TREFIECGETRESKRCGGTRESSGWSGMDGAWC 93
+R+F +C R +K C + W G WC
Sbjct: 492 SRQFAKCRRCRRTKYCSKECQHQAWPG-HSRWC 523
>SPCC794.11c |||ENTH domain protein Ent3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 3.9
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 111 TAPSARLAGSTASLRLSRFSAFNELTRV-AARNGFPHSTPSFGIAHSTSPSPHGPGFNPA 287
+APSA+ A +TA+ F FN L ++ + + F +F + TS G +
Sbjct: 349 SAPSAKPASNTAAFSSISFGGFNSLNQLPTSSSAFTPQPTTFNTGY-TSAFGMSSGLSNT 407
Query: 288 RLSVSPANQSMQTTKSRS 341
S Q T ++S
Sbjct: 408 SSQAGLGLTSQQPTAAKS 425
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 246 STSPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTP 371
+ SP+P P P +S SP+ S+ +T S P PS P
Sbjct: 274 TASPTPSSPTGTPNSMSKSPSLSSLAST---GASYRPGPSKP 312
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +1
Query: 472 KPKLKPNRSIDHRGITG-----AGSPGPTPEPLRHPKIKHTENKGPATAKTRL 615
KP+ NR +D T A +P P P+P+ +++ +N A + L
Sbjct: 497 KPRTSVNRLVDRYNHTSSLNKVAAAPAPVPKPVNLKSVENPQNNISAPTPSSL 549
>SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 656
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 243 HSTSPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGP 356
H S SP GF+ +L++SP+ ++ + + + P
Sbjct: 32 HRLSHSPMAEGFHKPKLNISPSESNLPNNVAENTTDTP 69
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 43 PEAPLPTHSAPESRAPPHHAPSIPLHPLDS-RVPPH 147
P+AP HS P++ + P + P+DS + PH
Sbjct: 567 PDAPHNCHSVPQNSSYPRPPMQVNRSPIDSMQTIPH 602
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 317 HADHKIEESLRGA*TLDPWIGS 382
H D++ +E +RG TLD W S
Sbjct: 540 HPDYRNKEYIRGTETLDVWFDS 561
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 49 APLPTHSAPESRAPPHHAPSIPLHPLDSR 135
+P+PT AP + P AP +P HP+ +R
Sbjct: 554 SPVPTIIAPALPSTP--APPLPSHPMATR 580
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 163 VSPHSMNSRVSLHAMDSRIPPHHLESRIPPVRHRTDLDSIRRDSACHPRIKAC 321
+SP S S S HA+D+ + P + I + +D SI + HP +C
Sbjct: 70 MSPSSSLSSESEHALDALVYPIYSHHNILEHENNSDYASITPSN--HPAFTSC 120
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 261 PHGPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTP 371
PHG FN A L SP +S S+ STP
Sbjct: 82 PHGQDFNDALLVASPDTSVALRYRSSQLSSSTFESTP 118
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 6.9
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 165 FSAFNELTRVAARNGFPHSTPSFGIAHSTSPSPHGPGFNPARL--SVSPANQSMQTTKSR 338
+ A +L AAR PS+ I P +GP +P + S++ +NQ
Sbjct: 166 YCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTSNQIFWKLIDG 225
Query: 339 SPSAGP 356
S A P
Sbjct: 226 SKEATP 231
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 219 STPSFGIAHSTSPSPHGPGFNPARLSVSPANQSMQTTKSRSPS 347
S+PS +H G N + SP+ S + SRS S
Sbjct: 36 SSPSSSSSHDFESKEDAEGMNKDESAPSPSTSSPSSASSRSQS 78
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 25.0 bits (52), Expect = 9.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 219 STPSFGIAHSTSPSPH-GPGFNPARLSVSPANQSMQTTKSRSPSAGPRPSTP 371
STP+ + S+ P+PH P A + +N S+ ++ S PSA P++P
Sbjct: 698 STPN-STSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSS-FPSAQSSPTSP 747
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 55 LPTHSAPESRAPPHHAPSIPLH-----PLDSRVPPHLLDSRVSPHSMNSRVSLHAMDSRI 219
LP HS+ + P + ++P S VPP + S + + S +S+ A++
Sbjct: 479 LPYHSSKGNLYAPQPSSNVPTKFTGGASESSSVPPRPIPSAMKGKAPASAISIEALEELD 538
Query: 220 PP 225
PP
Sbjct: 539 PP 540
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 9.1
Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 1/129 (0%)
Frame = +3
Query: 3 TSRSRRPRHLTSNSRSTVTDTQCXXXXXXXXXXXXHTAPSARLAGSTASLRLSRFSA-FN 179
TS S P S++ ST + +A S L ++ S S
Sbjct: 317 TSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLT 376
Query: 180 ELTRVAARNGFPHSTPSFGIAHSTSPSPHGPGFNPARLSVSPANQSMQTTKSRSPSAGPR 359
+ +A + S STS S P +N + + + + S + + S +A
Sbjct: 377 SVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSA 436
Query: 360 PSTPGSEAS 386
STP S +
Sbjct: 437 SSTPLSSVN 445
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 9.1
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 4/90 (4%)
Frame = +3
Query: 111 TAPSARLAGSTASLRLSRFSAFNELTRVAARNGF----PHSTPSFGIAHSTSPSPHGPGF 278
T P+ G + S S N T A +GF P +T + G + +PS G
Sbjct: 193 TTPATGSGGFSFGKPASLGSTNNASTSTTANSGFSFGKPATTSAPGSNTTVTPSSSITGT 252
Query: 279 NPARLSVSPANQSMQTTKSRSPSAGPRPST 368
N ++ + S + T S AG ST
Sbjct: 253 NDSKPAASNTGSAPTTGFSFGKPAGQAAST 282
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 309 NQSMQTTKSRSPSAGPRPSTPG 374
N++ Q+ KS + GPRPS G
Sbjct: 334 NEAQQSVKSLTERQGPRPSDNG 355
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 177 NELTRVAARNGFPHSTPSFGIAHSTSPSPHGPGFNPARLSVS 302
++L+ +AA G H+ PSF + + G NPA+L S
Sbjct: 58 DQLSEIAAEAGV-HAMPSFFLYKNGEKIEEIVGANPAKLEAS 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,504,781
Number of Sequences: 5004
Number of extensions: 51079
Number of successful extensions: 229
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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