Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30306
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 44 6e-04
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 44 6e-04
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 44 6e-04
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 44 6e-04
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 44 6e-04
AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-speci... 44 6e-04
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 40 0.006
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 40 0.006
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 40 0.006
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 40 0.006
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 40 0.006
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 40 0.006
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 40 0.006
AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein. 38 0.031
AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein. 38 0.031
AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein. 38 0.031
U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome ... 37 0.054
U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking reg... 37 0.054
U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking reg... 37 0.054
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro... 37 0.054
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r... 37 0.054
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r... 37 0.054
BX640729-1|CAE45845.1| 674|Homo sapiens hypothetical protein pr... 37 0.072
AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precurs... 37 0.072
AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precurso... 37 0.072
AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AL136322-1|CAI16644.1| 674|Homo sapiens crumbs homolog 1 (Droso... 37 0.072
AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1 (alt... 37 0.072
AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein. 37 0.072
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 36 0.095
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 36 0.095
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 36 0.095
BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin t... 36 0.13
BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin t... 36 0.13
BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin t... 36 0.13
BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin t... 36 0.13
AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens ... 36 0.13
AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens ... 36 0.13
AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens ... 36 0.13
AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein. 35 0.22
AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein. 35 0.22
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 35 0.29
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 35 0.29
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 35 0.29
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 35 0.29
AF099810-1|AAC68909.1| 252|Homo sapiens neurexin III-alpha prot... 34 0.38
AC009396-1|AAF21147.1| 351|Homo sapiens neurexin III protein. 34 0.38
EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein. 34 0.51
CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated pr... 34 0.51
CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated pr... 34 0.51
BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated pr... 34 0.51
BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated pr... 34 0.51
BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated pr... 34 0.51
BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated pr... 34 0.51
BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein. 34 0.51
BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein. 34 0.51
BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated pr... 34 0.51
BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated pr... 34 0.51
AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated pr... 34 0.51
AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated pr... 34 0.51
AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated pr... 34 0.51
AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated pr... 34 0.51
AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecu... 34 0.51
AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated pr... 34 0.51
AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecu... 34 0.51
AC092676-1|AAS07479.1| 197|Homo sapiens unknown protein. 34 0.51
AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein. 34 0.51
AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein. 34 0.51
AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant... 34 0.51
AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein. 34 0.51
AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protei... 34 0.51
AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein. 34 0.51
AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein. 34 0.51
AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein. 34 0.51
AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein. 34 0.51
AC004891-1|AAC36298.1| 208|Homo sapiens unknown protein. 33 0.67
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 33 0.88
X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein. 33 0.88
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 33 0.88
M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein. 33 0.88
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 33 0.88
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 33 0.88
AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens ... 33 0.88
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ... 33 0.88
AC019159-1|AAX88894.1| 291|Homo sapiens unknown protein. 33 0.88
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 33 0.88
AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein. 33 0.88
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 33 1.2
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 33 1.2
AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein pr... 33 1.2
AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein pr... 33 1.2
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 33 1.2
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 32 2.0
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 32 2.0
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 32 2.0
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 2.7
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 2.7
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 2.7
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 2.7
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 2.7
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 2.7
BC125179-1|AAI25180.1| 396|Homo sapiens NRXN1 protein protein. 31 3.6
AC019105-1|AAY14716.1| 389|Homo sapiens unknown protein. 31 3.6
AC007682-1|AAY14894.1| 277|Homo sapiens unknown protein. 31 3.6
BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein. 31 4.7
BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein. 31 4.7
BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein. 31 4.7
BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein. 31 4.7
BC046631-1|AAH46631.1| 278|Homo sapiens NRXN1 protein protein. 31 4.7
AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein. 31 4.7
X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288... 30 6.2
X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globu... 30 6.2
X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for ... 30 6.2
X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for ... 30 6.2
M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globu... 30 6.2
BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding glo... 30 6.2
BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding glo... 30 6.2
BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein. 30 6.2
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 30 6.2
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 30 8.2
BC024277-1|AAH24277.1| 547|Homo sapiens MON1 homolog B (yeast) ... 30 8.2
BC000124-1|AAH00124.2| 325|Homo sapiens sideroflexin 3 protein. 30 8.2
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 30 8.2
AL133215-21|CAI10936.1| 321|Homo sapiens sideroflexin 3 protein. 30 8.2
AK074707-1|BAC11151.1| 325|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF442486-1|AAL35292.1| 547|Homo sapiens HSV-I stimulating-relat... 30 8.2
AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein. 30 8.2
AB020679-1|BAA74895.2| 552|Homo sapiens KIAA0872 protein protein. 30 8.2
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4256 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 4313
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 4314 EEL-VSGRSPGPNV 4326
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4254 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 4311
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 4312 EEL-VSGRSPGPNV 4324
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4254 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 4311
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 4312 EEL-VSGRSPGPNV 4324
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4254 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 4311
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 4312 EEL-VSGRSPGPNV 4324
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 4233 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 4290
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 4291 EEL-VSGRSPGPNV 4303
>AB209851-1|BAD93088.1| 2331|Homo sapiens Basement membrane-specific
heparan sulfate proteoglycan core protein precursor
protein.
Length = 2331
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 18 GEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G+G F SL +QDG + + LG+ E ++ + NDG+WH++ A R + S+ VD
Sbjct: 2194 GQGKDFISLGLQDGHLVFRYQLGSGEARLV--SEDPINDGEWHRVTALREGRRGSIQVDG 2251
Query: 198 EVLKXESNSPSADI 239
E L SP ++
Sbjct: 2252 EEL-VSGRSPGPNV 2264
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1195 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1253
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1254 FDGFEGGFNFRTLQPNG 1270
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1693 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1751
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1519 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1576
Query: 213 ESNSPS 230
ES P+
Sbjct: 1577 ESLPPT 1582
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1247 FDGFEGGFNFRTLQPNG 1263
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1512 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1569
Query: 213 ESNSPS 230
ES P+
Sbjct: 1570 ESLPPT 1575
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 953 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1011
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1012 FDGFEGGFNFRTLQPNG 1028
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1451 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1509
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1277 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1334
Query: 213 ESNSPS 230
ES P+
Sbjct: 1335 ESLPPT 1340
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1247 FDGFEGGFNFRTLQPNG 1263
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1512 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1569
Query: 213 ESNSPS 230
ES P+
Sbjct: 1570 ESLPPT 1575
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1188 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1246
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1247 FDGFEGGFNFRTLQPNG 1263
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1686 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1744
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1512 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1569
Query: 213 ESNSPS 230
ES P+
Sbjct: 1570 ESLPPT 1575
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1195 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1253
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1254 FDGFEGGFNFRTLQPNG 1270
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1693 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1751
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1519 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1576
Query: 213 ESNSPS 230
ES P+
Sbjct: 1577 ESLPPT 1582
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +2
Query: 296 DRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFASLVS----FNGTDSYLRFVDVTS- 460
D F GCM+ + +L E E++G+ YGC SL+S FNG S++ + S
Sbjct: 1224 DINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNG-QSFIASIQKISF 1282
Query: 461 -ENPQLTLKFKTAKPNG 508
+ + F+T +PNG
Sbjct: 1283 FDGFEGGFNFRTLQPNG 1299
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 1722 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 1780
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKX 212
F +L + GR+ ++G+ + + + + YNDG WH + R + L +D +
Sbjct: 1548 FMTLFLAHGRLVYMFNVGHKK--LKIRSQEKYNDGLWHDVIFIRERSSGRLVIDGLRVLE 1605
Query: 213 ESNSPS 230
ES P+
Sbjct: 1606 ESLPPT 1611
>AJ316284-1|CAC87720.2| 1392|Homo sapiens neurexin 3-alpha protein.
Length = 1392
Score = 37.9 bits (84), Expect = 0.031
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKC 179
LI G+ + +L ++DG V L ++LG+ + I+ +ND WH + R L +
Sbjct: 293 LILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 352
Query: 180 SLTVD 194
+++VD
Sbjct: 353 TISVD 357
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
+++ G+G F ++ + G ++ LGN ++I + R ND +WH + R +
Sbjct: 897 ILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTH 956
Query: 180 SLTVDNEVL 206
SL VD +V+
Sbjct: 957 SLKVDTKVV 965
Score = 34.3 bits (75), Expect = 0.38
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LIYLVGEGGY--FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
L+YL +GG F L + DGRV L+ S+ E ++ + + ND WH L R +
Sbjct: 64 LLYL-DDGGVCDFLCLSLVDGRVQLRFSMDCAETAVL--SNKQVNDSSWHFLMVSRDRLR 120
Query: 177 CSLTVDNE 200
L +D E
Sbjct: 121 TVLMLDGE 128
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R
Sbjct: 505 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQR 547
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 42 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
L + GRV L V+LG + + G + ND +WH + R LTVD++V
Sbjct: 734 LELDGGRVKLMVNLGKGPETLYAG--QKLNDNEWHTVRVVRRGKSLKLTVDDDV 785
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 1130 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 1185
>AC008045-1|AAF28465.1| 154|Homo sapiens neurexin III protein.
Length = 154
Score = 37.9 bits (84), Expect = 0.031
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKC 179
LI G+ + +L ++DG V L ++LG+ + I+ +ND WH + R L +
Sbjct: 42 LILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 101
Query: 180 SLTVD 194
+++VD
Sbjct: 102 TISVD 106
>AB018286-1|BAA34463.2| 1205|Homo sapiens KIAA0743 protein protein.
Length = 1205
Score = 37.9 bits (84), Expect = 0.031
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKC 179
LI G+ + +L ++DG V L ++LG+ + I+ +ND WH + R L +
Sbjct: 66 LILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 125
Query: 180 SLTVD 194
+++VD
Sbjct: 126 TISVD 130
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
+++ G+G F ++ + G ++ LGN ++I + R ND +WH + R +
Sbjct: 679 ILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTH 738
Query: 180 SLTVDNEVL 206
SL VD +V+
Sbjct: 739 SLKVDTKVV 747
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R
Sbjct: 278 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQR 320
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 912 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 967
>U84744-1|AAB87737.1| 1531|Homo sapiens Chediak-Higashi syndrome
protein short isoform protein.
Length = 1531
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U72192-1|AAB39697.1| 1475|Homo sapiens lysosomal trafficking
regulator LYST protein.
Length = 1475
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U70064-1|AAB41533.1| 2001|Homo sapiens lysosomal trafficking
regulator protein.
Length = 2001
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog
protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
regulator protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
regulator protein.
Length = 3801
Score = 37.1 bits (82), Expect = 0.054
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 201 PRCPRSESTWQGTGERPIYAIYHHCMLGLCQLLSNPL----CCLMTPASKPFHLASVM 40
P PR + T Q E +++ Y H L L +LL L CCL + AS PF+ + M
Sbjct: 373 PFAPRQKKTLQEVQEDFVFSKYRHRALLLPELLEGVLQILICCLQSAASNPFYFSQAM 430
>BX640729-1|CAE45845.1| 674|Homo sapiens hypothetical protein
protein.
Length = 674
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 379 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 438
Query: 198 E 200
E
Sbjct: 439 E 439
>AY043325-1|AAL10682.1| 1406|Homo sapiens CRB1 isoform II precursor
protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AY043324-1|AAL10681.1| 1376|Homo sapiens CRB1 isoform I precursor
protein.
Length = 1376
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AL513325-3|CAM17208.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 198 E 200
E
Sbjct: 946 E 946
>AL513325-2|CAH72584.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AL139136-3|CAM21656.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 198 E 200
E
Sbjct: 946 E 946
>AL139136-2|CAI15311.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AL136322-4|CAM23328.1| 1294|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 198 E 200
E
Sbjct: 946 E 946
>AL136322-3|CAI16646.1| 1406|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 1406
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AL136322-1|CAI16644.1| 674|Homo sapiens crumbs homolog 1
(Drosophila) protein.
Length = 674
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 379 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 438
Query: 198 E 200
E
Sbjct: 439 E 439
>AJ748821-1|CAG38658.1| 1294|Homo sapiens crumbs homologue 1
(alternative protein) protein.
Length = 1294
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 886 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 945
Query: 198 E 200
E
Sbjct: 946 E 946
>AF154671-1|AAF01361.1| 1376|Homo sapiens CRB1 protein.
Length = 1376
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL-----DARRFLAKCSLTVDN 197
F ++ +QD R++ Q+ GN+ ++ + + ++ NDG WH++ D ++ + VDN
Sbjct: 998 FLNISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGTWHEVTLSMTDPLSQTSRWQMEVDN 1057
Query: 198 E 200
E
Sbjct: 1058 E 1058
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +3
Query: 24 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1417 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1474
Query: 204 LKXESNSPSADIPSLDT 254
+ D +LDT
Sbjct: 1475 PVLGESPSGTDGLNLDT 1491
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +3
Query: 24 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1398 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1455
Query: 204 LKXESNSPSADIPSLDT 254
+ D +LDT
Sbjct: 1456 PVLGESPSGTDGLNLDT 1472
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +3
Query: 24 GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G F +L + DGRV L+ G+ ++ + G+WH+L+ R + +L+VD E
Sbjct: 1417 GKDFLALALLDGRVQLRFDTGSGP--AVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGET 1474
Query: 204 LKXESNSPSADIPSLDT 254
+ D +LDT
Sbjct: 1475 PVLGESPSGTDGLNLDT 1491
>BC063822-1|AAH63822.1| 1009|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 1009
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 883 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 935
>BC033188-1|AAH33188.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
>BC033177-1|AAH33177.1| 152|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 152
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
>BC031251-1|AAH31251.1| 375|Homo sapiens EGF-like, fibronectin type
III and laminin G domains protein.
Length = 375
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 249 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 301
>AK097549-1|BAC05096.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ40230 fis, clone TESTI2022960, weakly similar to
Drosophila melanogaster SP2353 mRNA. ).
Length = 775
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 649 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 701
>AK092994-1|BAC04013.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ35675 fis, clone SPLEN2018302, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 152
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 26 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 78
>AK092479-1|BAC03900.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ35160 fis, clone PLACE6011334, weakly similar to
BASEMENT MEMBRANE-SPECIFIC HEPARAN SULFATE PROTEOGLYCAN
CORE ).
Length = 463
Score = 35.9 bits (79), Expect = 0.13
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
F SL ++DG + +LG+ I+V + +NDG+WH++ A R +TVD+
Sbjct: 337 FISLGLRDGALVFSYNLGSGVASIMVNGS--FNDGRWHRVKAVRDGQSGKITVDD 389
>AC026888-1|AAF87841.1| 328|Homo sapiens NRXNIII protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
+++ G+G F ++ + G ++ LGN ++I + R ND +WH + R +
Sbjct: 149 ILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTH 208
Query: 180 SLTVDNEVL 206
SL VD +V+
Sbjct: 209 SLKVDTKVV 217
>AC011440-1|AAF61277.1| 288|Homo sapiens NRXN3 protein.
Length = 288
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
+++ G+G F ++ + G ++ LGN ++I + R ND +WH + R +
Sbjct: 149 ILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTH 208
Query: 180 SLTVDNEVL 206
SL VD +V+
Sbjct: 209 SLKVDTKVV 217
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A G Q ++ +L L GG N V +R F GCMR +S++G N+D++ + +
Sbjct: 1580 AAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVHNRQFVGCMRNLSVDGKNVDMAGFIAN 1639
Query: 374 IGMAYGC 394
G GC
Sbjct: 1640 NGTREGC 1646
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A G Q ++ +L L GG N V +R F GCMR +S++G N+D++ + +
Sbjct: 1580 AAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVHNRQFVGCMRNLSVDGKNVDMAGFIAN 1639
Query: 374 IGMAYGC 394
G GC
Sbjct: 1640 NGTREGC 1646
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A G Q ++ +L L GG N V +R F GCMR +S++G N+D++ + +
Sbjct: 1580 AAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVHNRQFVGCMRNLSVDGKNVDMAGFIAN 1639
Query: 374 IGMAYGC 394
G GC
Sbjct: 1640 NGTREGC 1646
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 34.7 bits (76), Expect = 0.29
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A G Q ++ +L L GG N V +R F GCMR +S++G N+D++ + +
Sbjct: 1580 AAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVHNRQFVGCMRNLSVDGKNVDMAGFIAN 1639
Query: 374 IGMAYGC 394
G GC
Sbjct: 1640 NGTREGC 1646
>AF099810-1|AAC68909.1| 252|Homo sapiens neurexin III-alpha
protein.
Length = 252
Score = 34.3 bits (75), Expect = 0.38
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LIYLVGEGGY--FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
L+YL +GG F L + DGRV L+ S+ E ++ + + ND WH L R +
Sbjct: 64 LLYL-DDGGVCDFLCLSLVDGRVQLRFSMDCAETAVL--SNKQVNDSSWHFLMVSRDRLR 120
Query: 177 CSLTVDNE 200
L +D E
Sbjct: 121 TVLMLDGE 128
>AC009396-1|AAF21147.1| 351|Homo sapiens neurexin III protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ + DG +YL + +G+ + + T + NDG+W+ +D +R
Sbjct: 100 FFAVELLDGNLYLLLDMGSGT-IKVKATQKKANDGEWYHVDIQR 142
>EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein.
Length = 1547
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 580 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 622
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL 152
++Y G+G F + + G ++ LGN +LI + + ND +WH +
Sbjct: 982 ILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 1031
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 67 VLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 125
Query: 177 CSLTVD 194
+L +D
Sbjct: 126 TTLFID 131
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1215 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1270
>CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
>BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
>BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
>BC150275-1|AAI50276.1| 1642|Homo sapiens neurexin 2 protein.
Length = 1642
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 522 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 575
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
L++ G G F + + G ++ LGN L+ + + ND +WH + R
Sbjct: 915 LLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVH 974
Query: 180 SLTVDNEVLKXESN 221
+L +D+ + SN
Sbjct: 975 TLKIDSRTVTQHSN 988
>BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein.
Length = 1496
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKC 179
L+ G+ + +L +++G V L ++LG+ + ++ +ND WH + R L +
Sbjct: 320 LMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQV 379
Query: 180 SLTVD 194
+++VD
Sbjct: 380 TISVD 384
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 532 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 574
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL 152
++Y G+G F + + G ++ LGN +LI + + ND +WH +
Sbjct: 934 ILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 983
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 67 VLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 125
Query: 177 CSLTVD 194
+L +D
Sbjct: 126 TTLFID 131
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1167 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1222
>BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 390 LNQDLFSVSFQFRTWNPNG 408
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +3
Query: 48 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVD-NEVLKX 212
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D +E
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 213 ESNSP 227
+NSP
Sbjct: 483 RTNSP 487
>BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 390 LNQDLFSVSFQFRTWNPNG 408
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +3
Query: 48 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVD-NEVLKX 212
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D +E
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 213 ESNSP 227
+NSP
Sbjct: 483 RTNSP 487
>AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 838 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 870
>AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 838 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 870
>AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecule
CASPR3 protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 926 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
>AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated
protein 2 protein.
Length = 1331
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 390 LNQDLFSVSFQFRTWNPNG 408
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +3
Query: 48 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVD-NEVLKX 212
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D +E
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 213 ESNSP 227
+NSP
Sbjct: 483 RTNSP 487
>AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecule
Caspr2 protein.
Length = 1331
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 331 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 389
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 390 LNQDLFSVSFQFRTWNPNG 408
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 931 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 963
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 856 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 899
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +3
Query: 48 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVD-NEVLKX 212
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D +E
Sbjct: 426 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 482
Query: 213 ESNSP 227
+NSP
Sbjct: 483 RTNSP 487
>AC092676-1|AAS07479.1| 197|Homo sapiens unknown protein.
Length = 197
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 79 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 137
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 138 LNQDLFSVSFQFRTWNPNG 156
>AC044790-1|AAK68154.1| 1712|Homo sapiens NRXN2 protein.
Length = 1712
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 553 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 606
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
L++ G G F + + G ++ LGN L+ + + ND +WH + R
Sbjct: 955 LLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVH 1014
Query: 180 SLTVDNEVLKXESN 221
+L +D+ + SN
Sbjct: 1015 TLKIDSRTVTQHSN 1028
>AC007462-1|AAF03536.1| 681|Homo sapiens unknown protein.
Length = 681
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 100 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 142
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL 152
++Y G+G F + + G ++ LGN +LI + + ND +WH +
Sbjct: 502 ILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 551
>AB177862-1|BAD66840.1| 1434|Homo sapiens KIAA0921 splice variant 1
protein.
Length = 1434
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 275 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 328
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
L++ G G F + + G ++ LGN L+ + + ND +WH + R
Sbjct: 677 LLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVH 736
Query: 180 SLTVDNEVLKXESN 221
+L +D+ + SN
Sbjct: 737 TLKIDSRTVTQHSN 750
>AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein.
Length = 1175
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
RGF GC+R + +NGV LDL E + G+ GC
Sbjct: 974 RGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 1006
>AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protein
protein.
Length = 1477
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 540 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 582
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL 152
++Y G+G F + + G ++ LGN +LI + + ND +WH +
Sbjct: 942 ILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 991
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 67 VLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 125
Query: 177 CSLTVD 194
+L +D
Sbjct: 126 TTLFID 131
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1175 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1230
>AB035266-1|BAA94075.1| 1712|Homo sapiens neurexin II protein.
Length = 1712
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 553 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 606
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
L++ G G F + + G ++ LGN L+ + + ND +WH + R
Sbjct: 955 LLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVH 1014
Query: 180 SLTVDNEVLKXESN 221
+L +D+ + SN
Sbjct: 1015 TLKIDSRTVTQHSN 1028
>AB023138-1|BAA76765.2| 1658|Homo sapiens KIAA0921 protein protein.
Length = 1658
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/55 (29%), Positives = 35/55 (63%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+F++ + DG +YL + +G + + + ++R NDG+W +D +R K S++V++
Sbjct: 538 YFAMELLDGHLYLLLDMG-SGGIKLRASSRKVNDGEWCHVDFQRDGRKGSISVNS 591
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC- 179
L++ G G F + + G ++ LGN L+ + + ND +WH + R
Sbjct: 931 LLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVH 990
Query: 180 SLTVDNEVLKXESN 221
+L +D+ + SN
Sbjct: 991 TLKIDSRTVTQHSN 1004
>AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein.
Length = 1339
Score = 33.9 bits (74), Expect = 0.51
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNL-DLS--ENLE--SIG-MAYGC--QFASLVSFNGTDSYLRFVDV 454
+ F GCM I+ NGVN+ DL+ + LE ++G +++ C + V FN T SYL
Sbjct: 339 KNFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPVFFNAT-SYLEVPGR 397
Query: 455 TSENP-QLTLKFKTAKPNG 508
+++ ++ +F+T PNG
Sbjct: 398 LNQDLFSVSFQFRTWNPNG 416
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 939 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 971
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 864 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 907
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +3
Query: 48 MQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAK---CSLTVD-NEVLKX 212
+ + +V + +++ T+ I + + NDG+WH++ RFLAK LT+D +E
Sbjct: 434 LTESKVGVHINITQTKMSQIDISSGSGLNDGQWHEV---RFLAKENFAILTIDGDEASAV 490
Query: 213 ESNSP 227
+NSP
Sbjct: 491 RTNSP 495
>AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein.
Length = 1542
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTE-DLIIVGTTRAYNDGKWHKLDARRFLAKC 179
L+ G+ + +L +++G V L ++LG+ + ++ +ND WH + R L +
Sbjct: 366 LMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQV 425
Query: 180 SLTVD 194
+++VD
Sbjct: 426 TISVD 430
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARR 164
FF++ M DG +YL + +G + + I + NDG+W+ +D +R
Sbjct: 578 FFAIEMLDGHLYLLLDMG-SGTIKIKALLKKVNDGEWYHVDFQR 620
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKL 152
++Y G+G F + + G ++ LGN +LI + + ND +WH +
Sbjct: 980 ILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNV 1029
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 113 VLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 171
Query: 177 CSLTVD 194
+L +D
Sbjct: 172 TTLFID 177
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 1213 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 1268
>AC004891-1|AAC36298.1| 208|Homo sapiens unknown protein.
Length = 208
Score = 33.5 bits (73), Expect = 0.67
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NGV LDL E + + G GC
Sbjct: 136 QGFLGCIRSLRMNGVTLDLEERAKVTSGFISGC 168
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 63 VYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
V +GN I+V + ND +WH++ A R + + SL VD
Sbjct: 61 VSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQASLQVD 104
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>X70904-1|CAA50261.1| 414|Homo sapiens Laminin Ah protein.
Length = 414
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEV 203
G + ++ M++G+V ++V+ G + V ++ DG+WH++ R L VD+EV
Sbjct: 284 GEYLNVHMKNGQVIVKVNNGIRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEV 342
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>M59832-1|AAA63215.1| 1130|Homo sapiens merosin protein.
Length = 1130
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 1042 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 1075
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 833 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 884
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A GVQ + ++ +L L GG N V + F GCMR + I+G +D++ + +
Sbjct: 1723 AAAGVQTSSKKSLDLTGPLLLGGVPNLPENFPVSHKDFIGCMRDLHIDGRRVDMAAFVAN 1782
Query: 374 IGMAYGCQ 397
G GCQ
Sbjct: 1783 NGTMAGCQ 1790
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 3022 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 3055
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 2813 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 2864
>AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens
cDNA FLJ31966 fis, clone NT2RP7007925, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 963
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 75 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 853 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 893
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGCQFASL 409
+GF GC+R + +NG +DL E + + G+ GC L
Sbjct: 925 KGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCSIKKL 962
>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
protein.
Length = 3312
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 203 AQXGVQFAQRRHTELRH-LNFGG--NNKGILQVPDRGFDGCMRQISINGVNLDLSENLES 373
A GVQ + ++ +L L GG N V + F GCMR + I+G +D++ + +
Sbjct: 1653 AAAGVQTSSKKSLDLTGPLLLGGVPNLPENFPVSHKDFIGCMRDLHIDGRRVDMAAFVAN 1712
Query: 374 IGMAYGCQ 397
G GCQ
Sbjct: 1713 NGTMAGCQ 1720
>AC019159-1|AAX88894.1| 291|Homo sapiens unknown protein.
Length = 291
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 75 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 227 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 267
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 132 DGKWHKLDARRFLAKCSLTVDNEVLKXESNSPSA 233
DG+WHK+ A + + LTVD ++ +S +P++
Sbjct: 1753 DGQWHKVTANKIKHRIELTVDGNQVEAQSPNPAS 1786
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVD 194
F ++ +++G Y LG+ + ++ T NDG+WHK+ R + L VD
Sbjct: 1544 FATVQLRNGLPYFSYDLGSGDTHTMIPTK--INDGQWHKIKIMRSKQEGILYVD 1595
>AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein.
Length = 1306
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 75 VSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
+ +GN ++V + ND +WH + A R L + SL VDN
Sbjct: 852 IDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDN 892
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NG +DL E + + G+ GC
Sbjct: 924 KGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGC 956
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE 370
RGF GC+R + +NG+ LDL E +
Sbjct: 929 RGFLGCIRSLQLNGMTLDLEERAQ 952
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +2
Query: 293 PDRGFDGCMRQISINGVN-LDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 448
P R F GC+ + NGV+ +DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 328 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 387
Query: 449 DVTSENP-QLTLKFKT 493
D + E T +F+T
Sbjct: 388 DFSGEEEVSATFQFRT 403
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE 370
RGF GC+R + +NG+ LDL E +
Sbjct: 926 RGFLGCIRSLQLNGMTLDLEERAQ 949
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +2
Query: 293 PDRGFDGCMRQISINGVN-LDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 448
P R F GC+ + NGV+ +DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 325 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 384
Query: 449 DVTSENP-QLTLKFKT 493
D + E T +F+T
Sbjct: 385 DFSGEEEVSATFQFRT 400
>AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein
protein.
Length = 1235
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE 370
RGF GC+R + +NG+ LDL E +
Sbjct: 853 RGFLGCIRSLQLNGMTLDLEERAQ 876
>AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein
protein.
Length = 1260
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE 370
RGF GC+R + +NG+ LDL E +
Sbjct: 878 RGFLGCIRSLQLNGMTLDLEERAQ 901
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE 370
RGF GC+R + +NG+ LDL E +
Sbjct: 940 RGFLGCIRSLQLNGMTLDLEERAQ 963
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +2
Query: 293 PDRGFDGCMRQISINGVN-LDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 448
P R F GC+ + NGV+ +DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 339 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 398
Query: 449 DVTSENP-QLTLKFKT 493
D + E T +F+T
Sbjct: 399 DFSGEEEVSATFQFRT 414
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 31.9 bits (69), Expect = 2.0
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 LIYLVGEGGY-FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC 179
L+YL G F S+ + GRV + LG+ ++ T R YN+G W+K+ +R +
Sbjct: 2342 LLYLGSYGTKDFLSIELFRGRVKVMTDLGSGPITLL--TDRRYNNGTWYKIAFQRNRKQG 2399
Query: 180 SLTV-------DNEVLKXESNSPSADIPSLD 251
L V + E + E+ S+D+ LD
Sbjct: 2400 VLAVIDAYNTSNKETKQGETPGASSDLNRLD 2430
Score = 29.9 bits (64), Expect = 8.2
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +2
Query: 263 GGNNKGILQVPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQFAS-----LVSFNGT 427
GG K V F GC+ + +NG ++ L +E G GC +S F+G+
Sbjct: 2254 GGQIKKSPAVKVTHFKGCLGEAFLNGKSIGLWNYIEREGKCRGCFGSSQNEDPSFHFDGS 2313
Query: 428 DSYLRFVDVTSENPQLTLKFKTAKPNG 508
+ + + Q+ + F T PNG
Sbjct: 2314 GYSVVEKSLPATVTQIIMLFNTFSPNG 2340
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 42 LLMQDGRVYLQVS--LGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
L + DG+V V+ G T DGKWH L A + + +L VD + E
Sbjct: 426 LELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAVGAE 485
Query: 216 SNSPSADIPSLDT 254
SP S+DT
Sbjct: 486 --SPHTQSTSVDT 496
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 31.9 bits (69), Expect = 2.0
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +3
Query: 3 LIYLVGEGGY-FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKC 179
L+YL G F S+ + GRV + LG+ ++ T R YN+G W+K+ +R +
Sbjct: 14 LLYLGSYGTKDFLSIELFRGRVKVMTDLGSGPITLL--TDRRYNNGTWYKIAFQRNRKQG 71
Query: 180 SLTV-------DNEVLKXESNSPSADIPSLD 251
L V + E + E+ S+D+ LD
Sbjct: 72 VLAVIDAYNTSNKETKQGETPGASSDLNRLD 102
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 42 LLMQDGRVYLQVS--LGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
L + DG+V V+ G T DGKWH L A + + +L VD + E
Sbjct: 614 LELVDGKVLFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNAVGAE 673
Query: 216 SNSPSADIPSLDT 254
SP S+DT
Sbjct: 674 --SPHTQSTSVDT 684
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVS-LGNTEDLIIVGTT-RAYNDGKWHKLDARRFLAKCSLTVD 194
+F+L ++ GR+Y G+ ++ + Y+DGKWH++ A R A +T+D
Sbjct: 1569 YFALQLKKGRLYFLFDPQGSPVEVTTTNDHGKQYSDGKWHEIIAIRHQAFGQITLD 1624
>BC125179-1|AAI25180.1| 396|Homo sapiens NRXN1 protein protein.
Length = 396
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G + L + G++ ++ ++G T+D+ I + NDGK+H + R +L VD+
Sbjct: 94 GDYLELHIHQGKIGVKFNVG-TDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDS 149
>AC019105-1|AAY14716.1| 389|Homo sapiens unknown protein.
Length = 389
Score = 31.1 bits (67), Expect = 3.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE-SIGMAYGC 394
+GF GC+R + +NG +DL E + + G+ GC
Sbjct: 7 KGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGC 39
>AC007682-1|AAY14894.1| 277|Homo sapiens unknown protein.
Length = 277
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 67 VLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 125
Query: 177 CSLTVD 194
+L +D
Sbjct: 126 TTLFID 131
>BC150194-1|AAI50195.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC142649-1|AAI42650.1| 459|Homo sapiens NRXN3 protein protein.
Length = 459
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC068469-1|AAH68469.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC059368-1|AAH59368.1| 432|Homo sapiens neurexin 3 protein.
Length = 432
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>BC046631-1|AAH46631.1| 278|Homo sapiens NRXN1 protein protein.
Length = 278
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 LIYLVGEG--GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
++Y EG + +L + GR+ L S+ E ++ T NDG WH + RR
Sbjct: 67 VLYFDDEGFCDFLELILTRGGRLQLSFSVFCAEPATLLADTPV-NDGAWHSVRIRRQFRN 125
Query: 177 CSLTVD 194
+L +D
Sbjct: 126 TTLFID 131
>AJ493127-1|CAD37989.1| 398|Homo sapiens neurexin 3-beta protein.
Length = 398
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 27 GYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
G F L ++ G++ + ++G T D+ I NDGK+H + R +L VDN
Sbjct: 136 GDFLQLHIEQGKIGVVFNIG-TVDISIKEERTPVNDGKYHVVRFTRNGGNATLQVDN 191
>X16351-1|CAA34400.1| 288|Homo sapiens SHBG related protein (288
AA) protein.
Length = 288
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 90 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 143
>X16349-1|CAA34398.1| 402|Homo sapiens sex hormone-binding globulin
(SHBG) protein.
Length = 402
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>X05885-1|CAA29309.1| 356|Homo sapiens protein ( Human mRNA for sex
hormon binding globulin (SHBG). ).
Length = 356
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 49 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 102
>X05403-1|CAA28987.1| 381|Homo sapiens protein ( Human mRNA for sex
hormone-binding globulin (SHBG). ).
Length = 381
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 74 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 127
>M31651-1|AAC18778.1| 402|Homo sapiens sex hormone-binding globulin
protein.
Length = 402
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC112186-1|AAI12187.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC101785-1|AAI01786.1| 402|Homo sapiens sex hormone-binding
globulin protein.
Length = 402
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 95 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 148
>BC069597-1|AAH69597.1| 401|Homo sapiens SHBG protein protein.
Length = 401
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 33 FFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
+F L ++DGR +Q L N + VG +DG+WH+++ + L VD E
Sbjct: 94 WFMLGLRDGRPEIQ--LHNHWAQLTVGAGPRLDDGRWHQVEVKMEGDSVLLEVDGE 147
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Frame = +2
Query: 293 PDRGFDGCMRQISINGVN-LDLSE----NLESIG-MAYGC-QFASL-VSFNGTDSYLRFV 448
P R F GC+ + NGV+ +DL++ + ++G +++ C Q S+ V+F + SYL
Sbjct: 300 PHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALP 359
Query: 449 DVTSENP-QLTLKFKT 493
D + E T +F+T
Sbjct: 360 DFSGEEEVSATFQFRT 375
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQ 397
GCM +S+NG L E L + MA GC+
Sbjct: 353 GCMEDLSVNGQRRGLREALLTRNMAAGCR 381
>BC024277-1|AAH24277.1| 547|Homo sapiens MON1 homolog B (yeast)
protein.
Length = 547
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 267 PPKFKCLSSVCRRWANWTPX*APRC-PRSESTWQG 166
PP+ + LSS R W+ P +P C P S S QG
Sbjct: 63 PPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQG 97
>BC000124-1|AAH00124.2| 325|Homo sapiens sideroflexin 3 protein.
Length = 325
Score = 29.9 bits (64), Expect = 8.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 126 MLGLCQLLSNPLCCLMTPASKPFHLASV 43
++G C + + PLCC + P H++++
Sbjct: 274 LVGFCLVFATPLCCALFPQKSSIHISNL 301
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin
sulfate proteoglycan protein.
Length = 2322
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQ 397
GCM +S+NG L E L + MA GC+
Sbjct: 353 GCMEDLSVNGQRRGLREALLTRNMAAGCR 381
>AL133215-21|CAI10936.1| 321|Homo sapiens sideroflexin 3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 8.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 126 MLGLCQLLSNPLCCLMTPASKPFHLASV 43
++G C + + PLCC + P H++++
Sbjct: 270 LVGFCLVFATPLCCALFPQKSSIHISNL 297
>AK074707-1|BAC11151.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ90226 fis, clone NT2RM1000858, highly similar to
Sideroflexin 3. ).
Length = 325
Score = 29.9 bits (64), Expect = 8.2
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -2
Query: 126 MLGLCQLLSNPLCCLMTPASKPFHLASV 43
++G C + + PLCC + P H++++
Sbjct: 274 LVGFCLVFATPLCCALFPQKSSIHISNL 301
>AF442486-1|AAL35292.1| 547|Homo sapiens HSV-I stimulating-related
protein protein.
Length = 547
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 267 PPKFKCLSSVCRRWANWTPX*APRC-PRSESTWQG 166
PP+ + LSS R W+ P +P C P S S QG
Sbjct: 63 PPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQG 97
>AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.
Length = 1097
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +3
Query: 42 LLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLK 209
L + DG+++ Q+ G+ ++ + + RA NDG WH + SL++D+ ++
Sbjct: 393 LKIVDGKLWFQLDCGSGPGILGI-SGRAVNDGSWHSVFLELNRNFTSLSLDDSYVE 447
>AB020679-1|BAA74895.2| 552|Homo sapiens KIAA0872 protein protein.
Length = 552
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 267 PPKFKCLSSVCRRWANWTPX*APRC-PRSESTWQG 166
PP+ + LSS R W+ P +P C P S S QG
Sbjct: 68 PPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQG 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,869,820
Number of Sequences: 237096
Number of extensions: 2273993
Number of successful extensions: 5098
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 4565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5078
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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