Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30306
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 46 2e-05
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 46 2e-05
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 46 2e-05
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 46 2e-05
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 46 2e-05
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 36 0.025
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 36 0.025
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 36 0.025
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 36 0.025
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 36 0.025
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 36 0.033
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 36 0.033
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 36 0.033
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 36 0.033
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z75955-2|CAB00112.1| 355|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 31 0.94
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 31 0.94
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 31 0.94
Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical pr... 29 2.2
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 29 2.9
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 3.8
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 28 5.0
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 5.0
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 28 5.0
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 5.0
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 6.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 6.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 6.6
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 6.6
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48717-7|CAA88605.1| 518|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCS 182
L++ VG+ F +L + DG V L V LG+ I ++ YNDGKWH + R
Sbjct: 2934 LLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSN-YNDGKWHTVSIVREEKHVK 2992
Query: 183 LTVDNEVLKXESNSPSAD 236
+ +D E E + P D
Sbjct: 2993 IMIDGETEVLEGDVPGKD 3010
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQFASL--VSFNGTDSYLRFVDVT--SENPQLT 478
GC++ + + N+DL + S G+ GC S+ VSF + F + T SE+ +T
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVT 3098
Query: 479 LKFKT 493
KFKT
Sbjct: 3099 FKFKT 3103
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 39 SLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
+++++ GRV G+ + +I+ + ++ DG+WH + R L VD+ + E
Sbjct: 3361 AVMLEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESE 3417
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCS 182
L++ VG+ F +L + DG V L V LG+ I ++ YNDGKWH + R
Sbjct: 2934 LLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSN-YNDGKWHTVSIVREEKHVK 2992
Query: 183 LTVDNEVLKXESNSPSAD 236
+ +D E E + P D
Sbjct: 2993 IMIDGETEVLEGDVPGKD 3010
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQFASL--VSFNGTDSYLRFVDVT--SENPQLT 478
GC++ + + N+DL + S G+ GC S+ VSF + F + T SE+ +T
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVT 3098
Query: 479 LKFKT 493
KFKT
Sbjct: 3099 FKFKT 3103
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 39 SLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
+++++ GRV G+ + +I+ + ++ DG+WH + R L VD+ + E
Sbjct: 3393 AVMLEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESE 3449
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 21 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
EGG F + +++G++Y+ V+LG L + T D WH + RR KC L VD++
Sbjct: 1350 EGGDFLLVFIEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSK 1409
Query: 201 VLKXESNSP 227
+ SP
Sbjct: 1410 KILHVVASP 1418
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCS 182
L++ VG+ F +L + DG V L V LG+ I ++ YNDGKWH + R
Sbjct: 748 LLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSN-YNDGKWHTVSIVREEKHVK 806
Query: 183 LTVDNEVLKXESNSPSAD 236
+ +D E E + P D
Sbjct: 807 IMIDGETEVLEGDVPGKD 824
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQFASL--VSFNGTDSYLRFVDVT--SENPQLT 478
GC++ + + N+DL + S G+ GC S+ VSF + F + T SE+ +T
Sbjct: 853 GCIKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVT 912
Query: 479 LKFKT 493
KFKT
Sbjct: 913 FKFKT 917
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 39 SLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
+++++ GRV G+ + +I+ + ++ DG+WH + R L VD+ + E
Sbjct: 1207 AVMLEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESE 1263
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 21 EGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNE 200
EGG F + +++G++Y+ V+LG L + T D WH + RR KC L VD++
Sbjct: 1340 EGGDFLLVFIEEGKLYVGVNLGADVHLKPISTNVTVADNHWHSVSFRRKERKCELWVDSK 1399
Query: 201 VLKXESNSP 227
+ SP
Sbjct: 1400 KILHVVASP 1408
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCS 182
L++ VG+ F +L + DG V L V LG+ I ++ YNDGKWH + R
Sbjct: 2934 LLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSN-YNDGKWHTVSIVREEKHVK 2992
Query: 183 LTVDNEVLKXESNSPSAD 236
+ +D E E + P D
Sbjct: 2993 IMIDGETEVLEGDVPGKD 3010
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQFASL--VSFNGTDSYLRFVDVT--SENPQLT 478
GC++ + + N+DL + S G+ GC S+ VSF + F + T SE+ +T
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVT 3098
Query: 479 LKFKT 493
KFKT
Sbjct: 3099 FKFKT 3103
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 39 SLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
+++++ GRV G+ + +I+ + ++ DG+WH + R L VD+ + E
Sbjct: 3393 AVMLEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESE 3449
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCS 182
L++ VG+ F +L + DG V L V LG+ I ++ YNDGKWH + R
Sbjct: 2934 LLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESSN-YNDGKWHTVSIVREEKHVK 2992
Query: 183 LTVDNEVLKXESNSPSAD 236
+ +D E E + P D
Sbjct: 2993 IMIDGETEVLEGDVPGKD 3010
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 GCMRQISINGVNLDLSENLESIGMAYGCQFASL--VSFNGTDSYLRFVDVT--SENPQLT 478
GC++ + + N+DL + S G+ GC S+ VSF + F + T SE+ +T
Sbjct: 3039 GCIKSVKLGSDNVDLESSHASKGVRSGCPLHSVRTVSFLSDRTTASFNNATEFSEDVSVT 3098
Query: 479 LKFKT 493
KFKT
Sbjct: 3099 FKFKT 3103
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +3
Query: 39 SLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXE 215
+++++ GRV G+ + +I+ + ++ DG+WH + R L VD+ + E
Sbjct: 3393 AVMLEHGRVVFTYDTGSGQ--VIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYESE 3449
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LIYLVGE--GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
L+Y G G F ++ + DG+V +++LG + + + YNDGK H + A R ++
Sbjct: 2504 LLYFRGSEASGDFVAIYLNDGKVMFKINLGGGS-VAELTSQNVYNDGKEHTVKAIRTGSE 2562
Query: 177 CSLTVDNE 200
L VD++
Sbjct: 2563 MYLQVDSD 2570
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLK 209
+F S + DGRV L +GN + + + NDG H++ R KC L +D ++
Sbjct: 1154 HFVSAELYDGRVKLVYYIGNFPASHMYSSVKV-NDGLPHRISIRTSERKCFLQIDKNPVQ 1212
Query: 210 XESNSPSAD 236
NS +D
Sbjct: 1213 IVENSGKSD 1221
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLK 209
+F S + DGRV L +GN + + + NDG H++ R KC L +D ++
Sbjct: 1154 HFVSAELYDGRVKLVYYIGNFPASHMYSSVKV-NDGLPHRISIRTSERKCFLQIDKNPVQ 1212
Query: 210 XESNSPSAD 236
NS +D
Sbjct: 1213 IVENSGKSD 1221
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LIYLVGE--GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
L+Y G G F ++ + DG+V +++LG + + + YNDGK H + A R ++
Sbjct: 2504 LLYFRGSEASGDFVAIYLNDGKVMFKINLGGGS-VAELTSQNVYNDGKEHTVKAIRTGSE 2562
Query: 177 CSLTVDNE 200
L VD++
Sbjct: 2563 MYLQVDSD 2570
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 LIYLVGE--GGYFFSLLMQDGRVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDARRFLAK 176
L+Y G G F ++ + DG+V +++LG + + + YNDGK H + A R ++
Sbjct: 2504 LLYFRGSEASGDFVAIYLNDGKVMFKINLGGGS-VAELTSQNVYNDGKEHTVKAIRTGSE 2562
Query: 177 CSLTVDNE 200
L VD++
Sbjct: 2563 MYLQVDSD 2570
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 2341 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 2395
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 2444 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 2492
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 2341 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 2395
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 2444 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 2492
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 644 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 698
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 747 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 795
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 2341 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 2395
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 2444 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 2492
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 2341 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 2395
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 2444 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 2492
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 30 YFFSLLMQDGRVYLQVSL-GNTEDLIIVGTTRAYNDGKWHKLDARRFLAKCSLTVDN 197
Y F + ++ GR+ L+VS+ G + + V +T A NDG WH + + + L VDN
Sbjct: 644 YIF-IQLRGGRISLEVSMNGQSRSSLEVAST-ALNDGTWHDISVNQEGKRVELVVDN 698
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 VPDRGFDGCMRQISINGVNLDLSENLESIGMAYGCQ-FASLVSFNGTDS 433
+P G +GC+R +++NG DL+ GC+ + + N DS
Sbjct: 747 IPRAGLNGCVRNLNVNGDQYDLATPAFEQNSEKGCRLWGATCDSNSVDS 795
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 LNFGGNNKGILQVPDRGFDGCMRQISINGVNLDLSENLES-IGMAYGCQFASL 409
L FG N G+ + P GF GC+ + IN LDL E+ +S + + GC +L
Sbjct: 1007 LYFGSNPLGVSR-PSNGFRGCISTLRINENALDLYEDADSRMKVNRGCSVLTL 1058
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +2
Query: 299 RGFDGCMRQISINGVNLDLSENLE---SIGMAYGCQFAS 406
+G+ GC++ I +NGV+ + + E S G+ GC ++
Sbjct: 613 KGYTGCIKNIRMNGVSTKIGQEFEASNSTGIELGCSLSN 651
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 3 LIYLVGEGGYFFSLLMQDGRVYLQVSLGNTEDLII----VGTTRAYNDGKWHKLDARRFL 170
+++ G+ + +++QDG + ++ II ++ Y+D WH + R L
Sbjct: 311 MLFYAGDEKSYLHVMLQDGAIIASSKFDGSDARIIRMFNSFPSQRYDDDSWHTIILERSL 370
Query: 171 AKCSLTVDNEVLKXESNSPSAD 236
+L VD + +P D
Sbjct: 371 QMMTLIVDGRRDEIRQYAPELD 392
>Z75955-2|CAB00112.1| 355|Caenorhabditis elegans Hypothetical
protein R07B7.3 protein.
Length = 355
Score = 30.7 bits (66), Expect = 0.94
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 220 IRPAPTYRA*TLELRREQQRNTASAGSRLRRLYEADQHQRSKPG---SQ*ESRIDRHGVW 390
IR AP + + R +Q+RN + RR + + ++P Q ++ R
Sbjct: 196 IRRAPQQQV--RQNRPQQRRNVIIQSQQSRRFRPTNNNNNNRPTVIRRQVVQQVPRRAQV 253
Query: 391 MPVRFVGIVQRY*QLPSLRRRDQREPAADPQVQDR 495
++ +VQR Q P ++R QR+P Q Q R
Sbjct: 254 QRPQYEQVVQRVIQTPVAQQRFQRQPQRFQQQQPR 288
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 109 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSXRSPIRPAPTY 240
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 109 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSXRSPIRPAPTY 240
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 109 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSXRSPIRPAPTY 240
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical
protein M05D6.9 protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 187 VREHLARNRRASNLCHLPSLYARVVPTIIK 98
+RE++ RNR L HLP YAR P +I+
Sbjct: 137 LREYVCRNRFPEMLQHLP-CYARAAPALIR 165
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 165 TGERPIYAIYHHCMLGLCQLLSNPL 91
T ER + ++H C+L LCQ N L
Sbjct: 371 TDERDMPVLWHQCLLALCQRYKNDL 395
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 105 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXESNSP 227
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 105 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXESNSP 227
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 105 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKXESNSP 227
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 540 RDNARQHISIARKRQTRCCESKGTTR 617
RDN +I+I R R+ RCC G R
Sbjct: 687 RDNIMANITIPRTRRVRCCIQCGNRR 712
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -1
Query: 487 ELEGQLRVLAGHVDEAKVAVSTVERYQRSELASIRHADRF*ILTEIQVYSVDADLPHTTV 308
E +G L G VD+ V ST+ R R + R ++ LT + + S + D T+
Sbjct: 559 EFQGSLLSSFGEVDDYYVKTSTIGR-TRPQPRPKREPNQ---LTSMDMMSAELDKSRHTM 614
Query: 307 EASIRHLQYS 278
E S+R Q S
Sbjct: 615 EGSMRDAQTS 624
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 288 CSIPLLFPPKFKCLSSVCRRW 226
C LFPP +C +++C+RW
Sbjct: 2 CVDEKLFPPHHQCNNNLCKRW 22
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -1
Query: 487 ELEGQLRVLAGHVDEAKVAVSTVERYQRSELASIRHADRF*ILTEIQVYSVDADLPHTTV 308
E +G L G VD+ V ST+ R R + R ++ LT + + S + D T+
Sbjct: 559 EFQGSLLSSFGEVDDYYVKTSTIGR-TRPQPRPKREPNQ---LTSMDMMSAELDKSRHTM 614
Query: 307 EASIRHLQYS 278
E S+R Q S
Sbjct: 615 EGSMRDAQTS 624
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 120 GLCQLLSNPLCCLMTPASKPFHLASVMRRNILLP 19
G+C N LCC PAS FHLA + + LP
Sbjct: 63 GICSSGGNILCCEQCPAS--FHLACIGYESSDLP 94
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 19 GKEDISSHY*C--KMEGFTCRC 78
G+ D SSH C +GFTCRC
Sbjct: 185 GRHDCSSHATCIDTADGFTCRC 206
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 19 GKEDISSHY*C--KMEGFTCRC 78
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 19 GKEDISSHY*C--KMEGFTCRC 78
G+ D SSH C +GFTCRC
Sbjct: 185 GRHDCSSHATCIDTADGFTCRC 206
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 19 GKEDISSHY*C--KMEGFTCRC 78
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 19 GKEDISSHY*C--KMEGFTCRC 78
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -2
Query: 429 SVPLNDTNEANWHPYAMPIDSRFSLRSRFTPLMLICLIQPSKPRSGTCSIPLL 271
S+P N HP +P S+ + R P L+QPS P++ S+P L
Sbjct: 380 SLPQNQLRSLLAHPLILPRLSQQQNQLRSLPAHPPILLQPSLPQNQLRSLPAL 432
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 60 RVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDA---RRFLAKCSLTVDNEVLKXESNSPS 230
RV+ ++ + + E + TRA+ W KLDA C + +DN K + S
Sbjct: 241 RVFYELQMAS-EAVETNSLTRAFG---WDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEE 296
Query: 231 ADIPSLDT*TSEGTTKEYCKC 293
IP+L G K Y KC
Sbjct: 297 KSIPNL----FRGNMKSYIKC 313
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 60 RVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDA---RRFLAKCSLTVDNEVLKXESNSPS 230
RV+ ++ + + E + TRA+ W KLDA C + +DN K + S
Sbjct: 241 RVFYELQMAS-EAVETNSLTRAFG---WDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEE 296
Query: 231 ADIPSLDT*TSEGTTKEYCKC 293
IP+L G K Y KC
Sbjct: 297 KSIPNL----FRGNMKSYIKC 313
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 60 RVYLQVSLGNTEDLIIVGTTRAYNDGKWHKLDA---RRFLAKCSLTVDNEVLKXESNSPS 230
RV+ ++ + + E + TRA+ W KLDA C + +DN K + S
Sbjct: 241 RVFYELQMAS-EAVETNSLTRAFG---WDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEE 296
Query: 231 ADIPSLDT*TSEGTTKEYCKC 293
IP+L G K Y KC
Sbjct: 297 KSIPNL----FRGNMKSYIKC 313
>Z48717-7|CAA88605.1| 518|Caenorhabditis elegans Hypothetical
protein T10B9.3 protein.
Length = 518
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 314 CMRQISINGVNLDLSENLE 370
CMR+ +INGVN D N++
Sbjct: 396 CMRETTINGVNFDEGMNIQ 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,675,048
Number of Sequences: 27780
Number of extensions: 344038
Number of successful extensions: 966
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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