BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30305 (642 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 112 2e-25 11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 92 4e-19 06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 63 2e-10 02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 60 1e-09 06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 58 6e-09 10_08_0620 - 19321612-19323237 58 8e-09 02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 56 2e-08 06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 54 1e-07 03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 52 3e-07 05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 51 7e-07 04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 48 8e-06 05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 43 2e-04 04_04_1141 + 31180906-31181249,31181719-31181862,31181971-311820... 29 2.4 01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810... 29 2.4 03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 29 3.1 >03_06_0362 + 33379489-33379624,33380161-33380423,33380524-33380670, 33380753-33380914,33381681-33381758,33382329-33382462, 33382702-33382774,33382852-33382929,33383002-33383124, 33383223-33383317,33383723-33383932,33384115-33384172, 33384268-33384333 Length = 540 Score = 112 bits (270), Expect = 2e-25 Identities = 49/84 (58%), Positives = 66/84 (78%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 181 ELGY D+V V+E+G RV V K E + ++T+V+RGSTD+ +DD+ERA+DDGVNT+K + Sbjct: 341 ELGYADSVSVEEIGGARVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKSM 400 Query: 182 ARDGRFVPGAGATEIELAQQLLEF 253 RD R +PGA ATEIELA++L EF Sbjct: 401 CRDSRIIPGAAATEIELARRLKEF 424 Score = 72.1 bits (169), Expect = 3e-13 Identities = 35/105 (33%), Positives = 57/105 (54%) Frame = +1 Query: 268 GLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCD 447 GL+QYA+ KFA + E +PR LA+N+G +A E+++ +Y H G G ID E G D Sbjct: 430 GLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHAGGNTKVG--IDLEEGGCKD 487 Query: 448 AKEKGIIDSYLLKFWGIKYAVEQQQPFLRLIKSLWQREQAGQNQE 582 I D Y+ K + +KY+ + LR+ + + + G ++ Sbjct: 488 VSIMKIWDLYVTKLFALKYSADAACTVLRVDQIIMAKPAGGPRRD 532 >11_06_0178 + 20942757-20942801,20943790-20943867,20943930-20944025, 20944114-20944221,20944322-20944420 Length = 141 Score = 91.9 bits (218), Expect = 4e-19 Identities = 42/84 (50%), Positives = 60/84 (71%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 181 ELGY D+V ++++G R E + ++ V+RGSTD+ +DD+ RA+DDGVNT+K + Sbjct: 57 ELGYADSVSLEDIGGVR-----NEEGRNSVAIAVLRGSTDSILDDLGRAVDDGVNTYKSM 111 Query: 182 ARDGRFVPGAGATEIELAQQLLEF 253 RD R +PGA ATEIELA++L EF Sbjct: 112 CRDSRIIPGAAATEIELAKRLKEF 135 >06_03_1193 - 28298656-28298754,28299303-28299377,28299456-28299544, 28299679-28299760,28300385-28300474,28300557-28300655, 28300733-28300852,28300968-28301084,28301174-28301309, 28301415-28301584,28301744-28301947,28302032-28302157, 28302841-28303101,28303215-28303229 Length = 560 Score = 62.9 bits (146), Expect = 2e-10 Identities = 32/85 (37%), Positives = 48/85 (56%) Frame = +1 Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNG 438 T+ G Q+ V FA ALE IPR L DN+G +AT+V+NK+ + H G+ A F +D G Sbjct: 429 TIAGKSQFFVNSFAKALEVIPRQLCDNAGFDATDVLNKLRQKHASGE-GANFGVDINTGG 487 Query: 439 VCDAKEKGIIDSYLLKFWGIKYAVE 513 + D+ + + ++K I A E Sbjct: 488 IADSFANFVWEPAVVKINAINAATE 512 Score = 51.6 bits (118), Expect = 5e-07 Identities = 24/80 (30%), Positives = 46/80 (57%) Frame = +2 Query: 5 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 184 LG C+ +VG+ R +F S + +TIV+RG D ++++ ER++ D + + Sbjct: 345 LGTCEVFEERQVGNERFNIFSGCPS-GQTATIVLRGGADQFIEEAERSLHDAIMIVRRAL 403 Query: 185 RDGRFVPGAGATEIELAQQL 244 ++ VPG GA ++E+++ L Sbjct: 404 KNSTVVPGGGAIDMEISKYL 423 >02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 Length = 550 Score = 60.1 bits (139), Expect = 1e-09 Identities = 29/92 (31%), Positives = 51/92 (55%) Frame = +1 Query: 262 LPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGV 441 L G+E Y +++FA ALE IP LA+N+G N +V ++ H +G+KNAG ++ + Sbjct: 454 LQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKGEKNAGINV--RKGQI 511 Query: 442 CDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 + E+ ++ L+ I A E + L++ Sbjct: 512 TNILEENVVQPLLVSTSAITLACECVRMILKI 543 Score = 41.1 bits (92), Expect = 7e-04 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 16/97 (16%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDG------- 160 +LGY D V VG++++V R +T+++RGS +D+ ER++ D Sbjct: 351 KLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSLHDALCVIRLV 410 Query: 161 ---------VNTFKGIARDGRFVPGAGATEIELAQQL 244 VN + + + G GA EIE++ QL Sbjct: 411 SGLINELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQL 447 >06_03_0477 - 21250811-21250981,21251261-21251374,21251447-21251613, 21252051-21252153,21252315-21252367,21252438-21252570, 21252835-21253183,21253685-21254003,21254519-21254717 Length = 535 Score = 58.0 bits (134), Expect = 6e-09 Identities = 32/99 (32%), Positives = 54/99 (54%) Frame = +1 Query: 241 VIGVCDTLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDI 420 V D PG+EQYA+R FA AL++IP ALA+NSG + + + + K+ + + N I Sbjct: 429 VEAAADRYPGVEQYAIRSFADALDAIPLALAENSGLSPIDTLTAV-KSQQVKESNPHCGI 487 Query: 421 DSENNGVCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 D + G KE+ + ++ + K I A + + L++ Sbjct: 488 DCNDVGTNHMKEQNVFETLIGKQQQILLATQVVKMILKI 526 Score = 35.5 bits (78), Expect = 0.036 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFKMES-SESRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 178 +LG V G T+ + +E + SR TI IRG +++ +R++ D + + Sbjct: 348 KLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARN 407 Query: 179 IARDGRFVPGAGATEI 226 + R+ V G G+ EI Sbjct: 408 LIRNNSIVYGGGSAEI 423 >10_08_0620 - 19321612-19323237 Length = 541 Score = 57.6 bits (133), Expect = 8e-09 Identities = 29/92 (31%), Positives = 50/92 (54%) Frame = +1 Query: 262 LPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGV 441 L G+E Y VR+FA ALE IP LA+N+G + V ++ H +G+KNAG ++ + Sbjct: 445 LRGMESYCVREFAEALEVIPYTLAENAGLDPISTVTELRNRHAKGEKNAGINV--RKGRI 502 Query: 442 CDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 + E+ ++ L+ + A E + L++ Sbjct: 503 TNILEENVVQPLLVSTSAVTLACECVRMILKI 534 Score = 42.7 bits (96), Expect = 2e-04 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Frame = +2 Query: 2 ELGYCDAVHVDEVGD---TRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTF 172 +LG+ V VGD ++V + R +T+++RGS +D+ +R++ D Sbjct: 355 KLGHAHLVEEISVGDGNNNKIVKITGIKNMGRTATVLVRGSNQMVIDEAQRSLHDAFCVI 414 Query: 173 KGIARDGRFVPGAGATEIELAQQL 244 + + + G GA EIE++ QL Sbjct: 415 RCLVNKRFLIAGGGAPEIEMSMQL 438 >02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037, 8326249-8326374,8326451-8326835,8326931-8327208, 8327294-8327367,8327476-8327547,8327637-8327705, 8340132-8340201,8340806-8340873,8341571-8341643, 8341807-8341868,8342168-8342198 Length = 559 Score = 56.4 bits (130), Expect = 2e-08 Identities = 31/93 (33%), Positives = 47/93 (50%) Frame = +1 Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNG 438 ++ G+E++ A A E+IPR L N G N + ++ H G+ NA ID + Sbjct: 430 SVEGVEKWPYEAAALAFEAIPRTLLQNCGLNVIRTMTQLQGKHANGE-NAWVGIDGSSGD 488 Query: 439 VCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 + D KE+ I DSY +K K A+E LR+ Sbjct: 489 IVDMKERKIWDSYSVKAQTFKTAIEAACMLLRI 521 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/72 (25%), Positives = 44/72 (61%) Frame = +2 Query: 29 VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPG 208 V + GD F ++ + + T+++RG++ + ++++ER + D ++ + I ++ + +PG Sbjct: 354 VKKFGD-EFFAFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSMARNIWKNPKLLPG 412 Query: 209 AGATEIELAQQL 244 GATE+ ++ L Sbjct: 413 GGATELTVSATL 424 >06_03_0353 + 19810945-19810975,19811308-19811369,19811741-19811813, 19813292-19813359,19813496-19813565,19813908-19813976, 19814065-19814136,19814247-19814320,19814420-19814697, 19814804-19815188,19815268-19815393,19815583-19815687, 19815986-19815994,19817040-19817114,19817202-19817390 Length = 561 Score = 54.0 bits (124), Expect = 1e-07 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 3/96 (3%) Frame = +1 Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIY---KAHKEGQKNAGFDIDSE 429 ++ G+E++ A A E+IPR LA N G N ++ ++ H G+ NA ID Sbjct: 430 SVEGVEKWPYEAAALAFEAIPRTLAQNCGLNVIRIMTQLQGKDMLHANGE-NAWVGIDGR 488 Query: 430 NNGVCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 + + D KE+ I DSY +K K A+E LR+ Sbjct: 489 SGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRI 524 Score = 46.8 bits (106), Expect = 1e-05 Identities = 18/72 (25%), Positives = 45/72 (62%) Frame = +2 Query: 29 VDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPG 208 V ++GD F ++ + + T+++RG++ + ++++ER + D ++ + I ++ + +PG Sbjct: 354 VKKIGD-EFFTFIVDCKDPKACTVLLRGASKDVLNEVERNLQDAMSVARNILKNPKLLPG 412 Query: 209 AGATEIELAQQL 244 GATE+ ++ L Sbjct: 413 GGATELTVSAAL 424 >03_05_0339 + 23287620-23287676,23287784-23287849,23287937-23288048, 23288240-23288368,23288795-23288866,23289245-23289360, 23289494-23289570,23289788-23290273,23290373-23290688, 23290769-23290915 Length = 525 Score = 52.4 bits (120), Expect = 3e-07 Identities = 26/91 (28%), Positives = 55/91 (60%) Frame = +1 Query: 265 PGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVC 444 PG + +A+ F+ AL++IP +ADN+G ++ E+++++ H + AG D+ + + G Sbjct: 422 PGKKSHAIDAFSRALQAIPTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVG-- 479 Query: 445 DAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 D +++GI +++ +K + A E + LR+ Sbjct: 480 DMQKRGISEAFKVKQAILLSATEAAEMILRV 510 Score = 43.6 bits (98), Expect = 1e-04 Identities = 21/89 (23%), Positives = 48/89 (53%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 181 +LG+C+ + +G+ +++ F + + TIV+RG++++ +D+ ER++ D + Sbjct: 335 KLGHCNVIEEIMIGEDKLIHFSGVAM-GQACTIVLRGASEHVLDEAERSLHDALCVLSQT 393 Query: 182 ARDGRFVPGAGATEIELAQQLLEFVTLCP 268 D R + G G E+ +A+ + + P Sbjct: 394 VNDTRVLFGGGWPEMVMAKAVDDLARKTP 422 >05_07_0067 + 27463703-27463705,27464309-27464365,27464779-27464844, 27464985-27465096,27465281-27465409,27466076-27466191, 27466364-27466440,27466678-27467163,27467255-27467570, 27467618-27467797 Length = 513 Score = 51.2 bits (117), Expect = 7e-07 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 9/108 (8%) Frame = +1 Query: 241 VIGVCDTLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDI 420 V G+ PG + +A+ F+ AL+SIP +ADN+G ++ ++++++ H + Q AG D+ Sbjct: 391 VDGLARKTPGKKSHAIEAFSRALQSIPTIIADNAGLDSADLISQLRAEHHKEQSTAGIDV 450 Query: 421 DSENN---------GVCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537 S V D ++ GI +S+ K + A E + LR+ Sbjct: 451 ISGGGLELILRLLPQVGDMEKLGISESFKAKQAVLMSATEAAEMILRV 498 Score = 45.2 bits (102), Expect = 4e-05 Identities = 22/82 (26%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = +2 Query: 2 ELGYCDAVHVDEVGDTRVVVFK-MESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 178 +LG+C + +G+ R++ F +E ++ TIV+RG++++ +D+ ER++ D + Sbjct: 312 KLGHCKVIEEIMIGEDRLIHFSGVEMGQA--CTIVLRGASEHVLDEAERSLHDALCVLSQ 369 Query: 179 IARDGRFVPGAGATEIELAQQL 244 D R + G G E+ +A+++ Sbjct: 370 TVNDTRVLYGGGWPEMVMAKEV 391 >04_04_0729 + 27612106-27612195,27612284-27612370,27612469-27612528, 27612554-27612688,27612769-27612864,27613149-27613214, 27613647-27613864,27614093-27614189,27614605-27614691, 27614892-27615026,27615121-27615225,27615717-27615845, 27615925-27616028,27616598-27616688,27616774-27616857 Length = 527 Score = 47.6 bits (108), Expect = 8e-06 Identities = 26/85 (30%), Positives = 43/85 (50%) Frame = +2 Query: 5 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 184 LG+ D V + + D V++ K + S +S I++RG+ D +D+I+R++ D + K Sbjct: 330 LGHADEVVEERIADDDVILVKGTKNTSAVS-IILRGANDFMLDEIDRSLHDALCIVKRTL 388 Query: 185 RDGRFVPGAGATEIELAQQLLEFVT 259 V G GA E L+ L T Sbjct: 389 ESNMVVAGGGAVEAALSVYLENLAT 413 Score = 44.4 bits (100), Expect = 8e-05 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%) Frame = +1 Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNA------GFDI 420 TL EQ A+ +FA +L IP+ L+ N+ +ATE+V K+ H Q A + Sbjct: 414 TLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGL 473 Query: 421 DSENNGVCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRLIKSLWQREQAGQNQE 582 D + + E G+I+ + K I++A E LR+ + ++ N+E Sbjct: 474 DLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEESGNEE 527 >05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102, 2659187-2659255,2659561-2659655,2659740-2659944, 2660125-2660211,2660291-2660405,2660696-2660802, 2661054-2661146,2661243-2661290,2661345-2661544, 2661993-2662128,2662228-2662291,2662779-2662912 Length = 551 Score = 42.7 bits (96), Expect = 2e-04 Identities = 25/84 (29%), Positives = 42/84 (50%) Frame = +2 Query: 5 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 184 LG+ V+ +G+ + F R TI+I+G D+ + I+ A+ DG+ + K Sbjct: 363 LGWAGLVYEHTLGEEKYT-FIENVKNPRSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTV 421 Query: 185 RDGRFVPGAGATEIELAQQLLEFV 256 D V GAGA E+ + L++ V Sbjct: 422 EDEAVVLGAGAFEVAAKKHLIDNV 445 Score = 41.9 bits (94), Expect = 4e-04 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +1 Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNG 438 T+ G Q V FA AL IP+ LA+NSG + +V+ + H G ++ + Sbjct: 448 TVKGRAQLGVEAFADALLVIPKTLAENSGLDTQDVIVSLQNEHDRG---LVVGLNHHSGE 504 Query: 439 VCDAKEKGIIDSYLLK 486 D + +GI D+Y +K Sbjct: 505 PIDPQMEGIFDNYSVK 520 >04_04_1141 + 31180906-31181249,31181719-31181862,31181971-31182054, 31182196-31182236,31182726-31182803,31183050-31183139, 31183236-31183325,31183808-31183962,31184737-31184796 Length = 361 Score = 29.5 bits (63), Expect = 2.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 421 DSENNGVCDAKEKGIIDSYLLK 486 DSEN+G A +KG++DS +L+ Sbjct: 248 DSENSGTASATKKGVLDSIVLQ 269 >01_05_0793 + 25278846-25279504,25279598-25279702,25280949-25281071, 25281167-25281337,25281440-25281569,25281797-25282039, 25282084-25282202,25282269-25282331,25282423-25282486 Length = 558 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +1 Query: 343 GANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFW 492 G+N+TE NK+ + + G+D+ G +E +I Y+L W Sbjct: 497 GSNSTEFANKVERTGSSTSDSLGYDVIDHQCGYRSDRE--MIGRYMLVLW 544 >03_05_0696 - 26856413-26856416,26857917-26858524,26859041-26859101, 26859181-26859557,26860314-26861156 Length = 630 Score = 29.1 bits (62), Expect = 3.1 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -1 Query: 231 NSISVAPAPGTNLPSLAIPLNVLTP 157 NS+SVAPAPG L SL++ ++L P Sbjct: 136 NSMSVAPAPGQGL-SLSLNTHILAP 159 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,241,473 Number of Sequences: 37544 Number of extensions: 344054 Number of successful extensions: 983 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 942 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 979 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1584867848 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -