Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30305
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 56 2e-08
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 52 5e-07
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 52 5e-07
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 45 6e-05
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_53269| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_10830| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_48507| Best HMM Match : TolA (HMM E-Value=1) 28 5.6
SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4) 28 5.6
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 120 bits (289), Expect = 1e-27
Identities = 52/81 (64%), Positives = 69/81 (85%)
Frame = +2
Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 181
+LG+CD V++ E+G+T V +FK E E+ ++T+VIRGST+N MDDIERAIDDGVN+FK +
Sbjct: 197 DLGHCDLVYLSEIGETPVTIFKQEREETAVATVVIRGSTENIMDDIERAIDDGVNSFKAL 256
Query: 182 ARDGRFVPGAGATEIELAQQL 244
RD RFVPGAGA+EIELA++L
Sbjct: 257 TRDPRFVPGAGASEIELARKL 277
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 445 DAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537
DA E GI+D YL K WG+K A + LR+
Sbjct: 290 DAVEAGILDVYLTKHWGLKLATDAAVTVLRV 320
>SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +1
Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFD 417
T GLEQYA+ KFA +LE +PRALADN+G ATE+++K+Y AH+EG+ NAGFD
Sbjct: 1 TFAGLEQYAIAKFAESLECVPRALADNAGVKATELISKLYAAHQEGKMNAGFD 53
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/91 (32%), Positives = 51/91 (56%)
Frame = +1
Query: 265 PGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVC 444
PG E A+ FA AL +P +ADN+G ++ ++V K+ AH +G+ G ++ N V
Sbjct: 426 PGKEAAAMESFATALRQLPTIIADNAGYDSADLVAKLRAAHTQGKNTYG--LNMVNGTVG 483
Query: 445 DAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537
D ++ GI +SY +K + A E + +R+
Sbjct: 484 DMRDLGITESYQVKRQVLLSAAEAAEMIVRV 514
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/89 (24%), Positives = 46/89 (51%)
Frame = +2
Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGI 181
+LG C + +G+ +++ F + + T+VIRG+T +D+ ER++ D +
Sbjct: 339 KLGTCKKIEEVMIGEDKLIHFS-GCALNEACTVVIRGATQQILDEAERSLHDALCVLNQT 397
Query: 182 ARDGRFVPGAGATEIELAQQLLEFVTLCP 268
++ + V G GA+E+ +A + + P
Sbjct: 398 GKENKTVNGGGASEVLMAHAVSQLAAKTP 426
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 268 GLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCD 447
G++Q+ + A LE IPR L N GAN + + +A + N + ID E+ + D
Sbjct: 220 GVQQWPYKAVAKGLEVIPRTLIQNCGANTIRTITAL-RAKHAAEGNTSWGIDGESGQIVD 278
Query: 448 AKEKGIIDSYLLKFWGIKYAVEQQ 519
+E G+ D+Y +K K A+E++
Sbjct: 279 MQELGVWDTYAVKAQTFKTALEKK 302
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +2
Query: 50 RVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIE 229
R F E + TI++RG++ + ++++ER + D +N + + D R VPG GA E+
Sbjct: 147 RYFTFITECKNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGGGACEMA 206
Query: 230 LAQQLLE 250
LA L E
Sbjct: 207 LAHALTE 213
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/93 (30%), Positives = 48/93 (51%)
Frame = +1
Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNG 438
TL ++ Y VR FA ALE IP LA+N+G N V ++ H +G+ AG ++
Sbjct: 122 TLTSMDAYCVRAFAEALEIIPYTLAENAGLNPIATVTELRNRHAQGEVTAGINV--RKGT 179
Query: 439 VCDAKEKGIIDSYLLKFWGIKYAVEQQQPFLRL 537
V + E+ ++ L+ ++ A E + L++
Sbjct: 180 VTNILEENVLQPLLVSTSAVQLASETVRSILKI 212
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 5 LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIA 184
L + V VG ++VV S+ ++++RGS +++ +R++ D + + +
Sbjct: 37 LASAELVEEVSVGTSKVVKITGVSNPGNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLV 96
Query: 185 RDGRFVPGAGATEIELAQQLLEF 253
+ + G GA EIE+A +L E+
Sbjct: 97 KKRALIAGGGAPEIEVALRLAEY 119
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +1
Query: 256 DTLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENN 435
D + +EQYA+R +A AL++IP ALA+NSG N + V I K+ + +KN +D ++
Sbjct: 436 DKISTIEQYAMRAYADALDNIPLALAENSGLNPIQTVADI-KSRQVAEKNPRLGVDCMDS 494
Query: 436 GV 441
G+
Sbjct: 495 GI 496
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSE-SRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 178
+LG V G T+ + +E SR TI IRG + + +R+I D + +
Sbjct: 350 KLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALCVVRN 409
Query: 179 IARDGRFVPGAGATEI 226
+ RD R V G GATE+
Sbjct: 410 LVRDSRVVYGGGATEL 425
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1
Query: 256 DTLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDID 423
D + +EQYA+R +A AL++IP ALA+NSG N + V I K+ + +KN G +D
Sbjct: 151 DKIATIEQYAMRAYADALDNIPLALAENSGLNPIQTVADI-KSRQVAEKNPGLGVD 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 ELGYCDAVHVDEVGDTRVVVFKMESSE-SRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 178
+LG V G T+ + +E SR TI IRG + + +R+I D + +
Sbjct: 65 KLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALCVVRN 124
Query: 179 IARDGRFVPGAGATEI 226
+ RD R V G GATE+
Sbjct: 125 LVRDSRVVYGGGATEL 140
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 50 RVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIE 229
R F E + + TI++RG++ + ++++ER + D +N + + D R VPG GA E+
Sbjct: 204 RYFTFITECNNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGGGACEMA 263
Query: 230 LAQQLLE 250
LA L E
Sbjct: 264 LAHALTE 270
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 268 GLEQYAVRKFAXALESIPRALADNSGANATEVVNKI 375
G++Q+ + A LE IPR L N GAN + +
Sbjct: 277 GVQQWPYKAVAKGLEVIPRTLIQNCGANTIRTITAL 312
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 92 STIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFVT 259
S+I++RG+ D +D++ER++ D + K + VPG GA E L+ L F T
Sbjct: 8 SSIILRGANDYMLDEMERSMHDAICVVKRVLESKTLVPGGGAVEAALSIYLENFAT 63
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 259 TLPGLEQYAVRKFAXALESIPRALADNSGANATEVVNKIYKAH 387
T+ G EQ + A A E IPR L DN+G +AT ++NK+ + H
Sbjct: 70 TIAGKEQLLIGAMAKAFEIIPRQLCDNAGFDATNILNKLRQKH 112
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +2
Query: 80 ESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEF 253
+S TI++RG + +M++ ER++ D + + ++ V G GA E+EL++ L ++
Sbjct: 10 QSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAGGGAIEMELSKYLRDY 67
>SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/74 (29%), Positives = 42/74 (56%)
Frame = +1
Query: 316 IPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWG 495
+P +ADN+G ++ ++V K+ AH +G+ G ++ N V D ++ GI +SY +K
Sbjct: 1 LPTIIADNAGYDSADLVAKLRAAHTQGKNTYG--LNMVNGTVGDMRDLGITESYQVKRQV 58
Query: 496 IKYAVEQQQPFLRL 537
+ A E + +R+
Sbjct: 59 LLSAAEAAEMIVRV 72
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 289 RKFAXALESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGII 468
+ FA AL IP+ LA NSG + E + K+ + + + G D+ S + + G+
Sbjct: 360 KAFADALLVIPKTLAQNSGFDPQETMVKLLEEYADSNTPVGVDLSSGEAMI--PADAGVW 417
Query: 469 DSYLLK 486
D+Y +K
Sbjct: 418 DNYRVK 423
>SB_53269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 635 YIK*CKQIFKTHHHFQWRSWFWPACSLCHNDLINLKNGCCCSTAYFI 495
YI +Q+ + F + W++ AC H+ + + N CC ++F+
Sbjct: 255 YIANFRQLAELSTVFVNQRWYYSACKTPHSSRVFVINACCMVLSFFL 301
>SB_10830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1006
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 304 ALESIP-RALADNSGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYL 480
A ES P A DNS +A+ + + K GQK++ DI+SE +G KE D
Sbjct: 75 AEESTPLNAAMDNSKGDASN--GTLGVSIKNGQKSSSRDIESEESG----KESDCSDDSF 128
Query: 481 LKFWGIKYAVEQQQPF-LRLIKSLWQREQAGQNQE 582
W + V + + F ++SL+QR NQ+
Sbjct: 129 AGQWKLFTRVLKSKRFESEKLESLYQRYIFRLNQK 163
>SB_48507| Best HMM Match : TolA (HMM E-Value=1)
Length = 649
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 117 VEPLMTIVEIRDSELSILNTTTRVSPTSSTCTASQ 13
V+ L+T++ D E S LNT + PT ST +Q
Sbjct: 549 VQVLITLITSPDKEASALNTPSDQEPTVSTSEENQ 583
>SB_34086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 LESIPRALADNSGANATEVVNKIYKAHKEGQKNAGFDI-DSENNGVCDAKEKGII 468
+ I +N +++ I K+G K AGF + D++ N +KG+I
Sbjct: 170 MAQIQTTAPENHPTQDQDLIEDISDPFKKGSKQAGFKLADTKGNSKLGTNDKGVI 224
>SB_30541| Best HMM Match : PSI_PsaJ (HMM E-Value=4)
Length = 368
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 3 NLDTVMLYMLMKSGTLVLLCSRWKAQNLGFPLLSLEVLLTTTWTI*RGLLMMV 161
++ T+ L ++S L L+C W QN FP L +L +GLLM V
Sbjct: 9 SVQTLSLSPALRSVALRLVCRVWMKQNRVFPHLHKALLGAKAGIRDKGLLMEV 61
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 563 CSLCHNDLINLKNGCCCSTAYFIPQNFKRY 474
CSL +ND+ +K C C Y I N +Y
Sbjct: 363 CSLPNNDVTPVKKPCRCQPGYEIVSNGGKY 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,155,432
Number of Sequences: 59808
Number of extensions: 414697
Number of successful extensions: 1121
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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