Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30304
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0301 + 2011707-2015423,2016982-2017182,2017670-2017786,201...    31   0.87 
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729...    30   1.5  

>02_01_0301 +
           2011707-2015423,2016982-2017182,2017670-2017786,
           2018030-2018122
          Length = 1375

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -1

Query: 109 HVKLHKIERTRVKLN*MPRENSSLFHILVLKMYTKV 2
           H++   +ERT +    +P+ +  L+H+LVLKM  KV
Sbjct: 624 HLRYLNLERTSISK--LPKSSCKLYHLLVLKMNKKV 657


>10_03_0038 -
           7297210-7297248,7297361-7297429,7297524-7297731,
           7297829-7297911,7298859-7298998,7299132-7299183
          Length = 196

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 115 IISCNKCAVHGRLVFSYGNCDQFAGQKGLLF 207
           I+  NKC +  R V SY   +QFA + GLLF
Sbjct: 118 ILIGNKCDLSHRRVVSYQEGEQFAKEHGLLF 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,554,634
Number of Sequences: 37544
Number of extensions: 249418
Number of successful extensions: 356
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)