Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30303
         (553 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16MN0 Cluster: Odorant receptor; n=2; Culicidae|Rep: O...    37   0.36 
UniRef50_Q98RV4 Cluster: Putative uncharacterized protein orf744...    36   0.63 

>UniRef50_Q16MN0 Cluster: Odorant receptor; n=2; Culicidae|Rep:
           Odorant receptor - Aedes aegypti (Yellowfever mosquito)
          Length = 399

 Score = 36.7 bits (81), Expect = 0.36
 Identities = 27/85 (31%), Positives = 40/85 (47%)
 Frame = +3

Query: 48  FEIYMYCKRNKCSDVSPLKMSIK**LYLKITELSTDLSSINNPAIFTNPIFSIVVIKAS* 227
           F+I  Y  R+   D   L+  +K  L+  + ELS  L  I +P+I  N + S V+I    
Sbjct: 230 FDILAYRLRHAKGDYKELEQCVK--LHQSVVELSNQLEGIFSPSILVNFVGSSVIICLVG 287

Query: 228 FYFSNCKFCNGSFKNVLFYIQKNVQ 302
           F  ++       FK +LF I   VQ
Sbjct: 288 FQATSNISAFDLFKFILFLISSLVQ 312


>UniRef50_Q98RV4 Cluster: Putative uncharacterized protein orf744;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf744 - Guillardia theta (Cryptomonas phi)
          Length = 744

 Score = 35.9 bits (79), Expect = 0.63
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 547 VHYVAYNHF*LTYNNNICVK-RYTLRSFEKKKTKELVLSKYLILILVVVYFKS 392
           + Y   N F   Y N + +K ++    F  K+T  L+L +Y+ILI+  +YF S
Sbjct: 680 IEYFYQNEFKTIYFNKVKMKGKFFELKFRTKETNHLMLLRYIILIIQQIYFNS 732


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,658,530
Number of Sequences: 1657284
Number of extensions: 8227737
Number of successful extensions: 21777
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21764
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)