Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30303
         (553 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-P...    31   0.78 
AY069271-1|AAL39416.1|  305|Drosophila melanogaster GM09636p pro...    30   2.4  
AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA...    30   2.4  
AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.     30   2.4  

>AE014297-3049|AAN13885.1|  381|Drosophila melanogaster CG31335-PA
           protein.
          Length = 381

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 250 NLQFEK*NQEAFMTTIEKIGLVKMAGLFIEDKSVLNSVIFRYNYHL 113
           NL+FE   Q AF+   ++I + K   LF E  SV+ S+   +N HL
Sbjct: 205 NLRFESGFQTAFLRKQQRIRVQKSMALFKEISSVVTSLQDIFNVHL 250


>AY069271-1|AAL39416.1|  305|Drosophila melanogaster GM09636p
           protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 431 VLNSYISRRILQKPPKMSQILREKKNVFKNHNLIQIC 321
           +LN ++SR  + KP  +  IL++   + KN  L  +C
Sbjct: 214 LLNDWVSREEVPKPNDVDLILKQVSRMIKNDQLDHVC 250


>AE014296-120|AAF47401.1|  995|Drosophila melanogaster CG12189-PA
            protein.
          Length = 995

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 431  VLNSYISRRILQKPPKMSQILREKKNVFKNHNLIQIC 321
            +LN ++SR  + KP  +  IL++   + KN  L  +C
Sbjct: 904  LLNDWVSREEVPKPNDVDLILKQVSRMIKNDQLDHVC 940


>AB049435-1|BAB15801.1|  995|Drosophila melanogaster dREV1 protein.
          Length = 995

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 431  VLNSYISRRILQKPPKMSQILREKKNVFKNHNLIQIC 321
            +LN ++SR  + KP  +  IL++   + KN  L  +C
Sbjct: 904  LLNDWVSREEVPKPNDVDLILKQVSRMIKNDQLDHVC 940


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,607,821
Number of Sequences: 53049
Number of extensions: 365331
Number of successful extensions: 859
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)