Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30300
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 97 9e-21
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 97 9e-21
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 70 2e-12
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 66 3e-11
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 64 8e-11
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 59 4e-09
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 58 9e-09
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 53 2e-07
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 52 4e-07
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 50 1e-06
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 48 9e-06
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 47 1e-05
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 45 5e-05
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 45 7e-05
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 39 0.004
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 38 0.006
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 38 0.010
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 33 0.21
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 31 1.1
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103... 30 1.5
07_01_0448 - 3383706-3384761 30 2.0
10_07_0113 - 12993300-12993413,12993493-12993775,12993856-129940... 29 2.6
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 4.6
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 28 8.0
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 97.5 bits (232), Expect = 9e-21
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +1
Query: 250 KILDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKS 429
+ +D V EGG ETT LL+Q++D IFYTG VGRIV +A K+LTPV LELGGK
Sbjct: 141 RYVDGSCIKVVEGGVAETTTLLEQKWDKIFYTGNGKVGRIVMASAAKHLTPVVLELGGKC 200
Query: 430 PVYVDNTVDIVVTAKRILWGKF-INVGQLALLP 525
PV VD+ V++ VTAKRI GK+ N GQ + P
Sbjct: 201 PVVVDSNVNLHVTAKRIAAGKWGCNNGQACISP 233
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 8 LHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNT 187
L L +W KP+ + + +P GVVLVI AWNYP L + P+ GAIAAGN
Sbjct: 60 LKNLKKWMKPQKVTAPLMTFPSTARVAAEPLGVVLVISAWNYPFLLSIDPIIGAIAAGNA 119
Query: 188 VIVKPSELSVACSNFVVENLPKF 256
V++KPSE++ A S+ + E LP++
Sbjct: 120 VVLKPSEVAPATSSLLAELLPRY 142
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +3
Query: 504 GPTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 680
G CI+PD+++ TK K LEA +KVL+++YG DP +S DL RI+N+ HF+RL++L++
Sbjct: 227 GQACISPDFIITTKSFAPKLLEALEKVLEKFYGRDPLRSSDLSRIVNSNHFNRLKKLMD 285
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 97.5 bits (232), Expect = 9e-21
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +1
Query: 256 LDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPV 435
+D+ V EGG ETT LL+Q++D IFYTG NVGRIV AA K+LTPV LELGGK P
Sbjct: 172 VDSSCIKVVEGGVPETTALLEQKWDKIFYTGSGNVGRIVMAAAAKHLTPVALELGGKCPA 231
Query: 436 YVDNTVDIVVTAKRILWGKF-INVGQLALLP 525
VD+ D+ VT KR+ GK+ N GQ + P
Sbjct: 232 IVDSNTDLHVTMKRLAVGKWGCNNGQACIAP 262
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +3
Query: 504 GPTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 680
G CIAPDYV+ TK + +++ K+VLK +YGEDP +S DL RI+N+ HF RL LIE
Sbjct: 256 GQACIAPDYVITTKSFAPELVDSLKRVLKRFYGEDPLQSEDLSRIVNSNHFRRLTNLIE 314
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +2
Query: 83 IYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKF 256
I ++P GVVLVI AWNYP L + P+ GAIAAGN V++KPSE++ A S + LP++
Sbjct: 114 IVSEPLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPATSALFAKLLPEY 171
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = +1
Query: 250 KILDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKS 429
K +D A V +GGP+ +L++ R+D + +TG + R+V AA K+LTPV LELGGK
Sbjct: 169 KYMDATAVKVIQGGPEVGEQLMEHRWDKVLFTGSPRIARVVMAAAAKHLTPVALELGGKC 228
Query: 430 PVYVD----NTVDIVVTAKRILWGKFINVGQLALLPTTY 534
P D + D+ R++ GK+ + A L Y
Sbjct: 229 PCIFDTIGGSARDLQTAVNRVVGGKWSSCAGQACLAIDY 267
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +2
Query: 95 PYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKF 256
P GV+LV WN PL L L P+ GA+AAGN V +KPSEL+ A + F+ +N+ K+
Sbjct: 117 PLGVILVFSCWNVPLGLSLEPLVGALAAGNAVALKPSELAPATAKFLGDNVGKY 170
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 504 GPTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 680
G C+A DYVL + ++A K LK+++ + S + RI+N RHF RL L++
Sbjct: 259 GQACLAIDYVLVEERFVPVLIKALKSTLKKFFAD----SDHMARIVNARHFQRLSDLLK 313
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +1
Query: 229 FCCRKSTKILDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVT 408
F K LD +A V +GG + EL++ R+D + +TG VGRI+ A K+LTPV
Sbjct: 51 FLAANIPKYLDANAVKVVQGGAEVGEELMEHRWDKVLFTGNARVGRIIMTKAAKHLTPVA 110
Query: 409 LELGGKSPVYVD 444
LELG K P VD
Sbjct: 111 LELGSKCPCIVD 122
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = +2
Query: 143 LLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKF 256
L L P++GAIAAGN V++KPSE + + + F+ N+PK+
Sbjct: 22 LALEPLSGAIAAGNAVVLKPSEFAPSTAAFLAANIPKY 59
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 522 PDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 680
P V C + +E K LK ++ E P+ + RI+N +HF RL L+E
Sbjct: 118 PCIVDCLDSKRECQIELLKSTLKRFFTE-PEY---MARILNEKHFHRLTNLLE 166
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +1
Query: 229 FCCRKSTKILDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVT 408
F + LD+ A V GGP EL++ R+D + +TG +GRI+ A K+LTPV
Sbjct: 126 FLAANIPRYLDSRAVKVVLGGPNVGEELMEHRWDKVLFTGSARIGRIIMAKAVKHLTPVA 185
Query: 409 LELGGKSPVYVD 444
LELG K P VD
Sbjct: 186 LELGSKCPCIVD 197
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = +2
Query: 143 LLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENLPKF 256
L L P++GAIAAGN V++KPSEL+ + + F+ N+P++
Sbjct: 97 LALEPLSGAIAAGNAVVLKPSELAPSTAAFLAANIPRY 134
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATK-NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 504
D + +TG T VGR+V EAA K NL PV+LELGGKSPV V + D+ + + N
Sbjct: 237 DKVSFTGSTEVGRLVMEAAAKSNLKPVSLELGGKSPVIVFDDADLDTAVNLVHMASYTNK 296
Query: 505 GQLAL 519
G++ +
Sbjct: 297 GEICV 301
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
+P GVV I WNYP + + A+AAG T++VKP+E
Sbjct: 155 EPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAE 193
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 57.6 bits (133), Expect = 9e-09
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATK-NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 504
D + +TG T VGR++ EA+ K NL PV LELGGKSP V + D+ + + G F N
Sbjct: 264 DVVAFTGSTEVGRLIMEASAKSNLKPVALELGGKSPFIVFDDADLDKAVELAIGGNFFNK 323
Query: 505 GQ 510
G+
Sbjct: 324 GE 325
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
+P GV +I WN+P + ++ A+AAG TV+VKP+E
Sbjct: 182 EPLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAE 220
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVG 507
D I +TG T G+ + A++ + PV+LELGGKSP+ V + VDI + ++G F N G
Sbjct: 234 DKIAFTGSTETGKRIMITASQMVKPVSLELGGKSPLIVFDDVDIDKAVEWAMFGCFANAG 293
Query: 508 QL 513
Q+
Sbjct: 294 QV 295
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 74 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSEL-SVAC 223
E + +P GVV +I WNYPL + +A A+AAG T ++KPSEL S+ C
Sbjct: 146 ESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTC 196
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYE-AATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 504
D + +TG T G+IV E AA NL PVTLELGGKSP V + D+ + F N
Sbjct: 291 DKLAFTGSTGTGKIVLELAARSNLKPVTLELGGKSPFIVMDDADVDQAVELAHRALFFNQ 350
Query: 505 GQ 510
GQ
Sbjct: 351 GQ 352
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 77 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVENL 247
V + ++P GV I WN+PL + + A+A GN V++K +E + + FV L
Sbjct: 204 VQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSALFVASLL 260
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYE-AATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 504
D I +TG T+ G++V E AA NL VTLELGGKSP + + D+ + + F N
Sbjct: 287 DKIAFTGSTDTGKVVLELAARSNLKSVTLELGGKSPFIIMDDADVDHAVELAHFALFFNQ 346
Query: 505 GQ 510
GQ
Sbjct: 347 GQ 348
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 77 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
V + ++P GV I WN+PL + + A+A GNTV++K +E
Sbjct: 200 VQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAE 243
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVG 507
D + +TG G+ + +A + PV+LELGGKSP+ V + VD+ + L+G F G
Sbjct: 253 DKVAFTGSYETGKKIMASAAPMVKPVSLELGGKSPIVVFDDVDVEKAVEWTLFGCFWTNG 312
Query: 508 QL 513
Q+
Sbjct: 313 QI 314
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 128 NYPLQLLLLPMAGAIAAGNTVIVKPSEL-SVAC 223
NYPL + +A A+AAG T ++KPSEL SV C
Sbjct: 183 NYPLLMATWKVAPALAAGCTAVLKPSELASVTC 215
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATK-NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINV 504
D + +TG +GR + E+A + NL V+LELGGKSP+ V + D+ + F N
Sbjct: 253 DSVAFTGSAEIGRAIMESAARSNLKNVSLELGGKSPMIVFDDADVDMAVSLSSLAVFFNK 312
Query: 505 GQLAL 519
G++ +
Sbjct: 313 GEICV 317
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
+P GVV VI WN+P + L ++ A+AAG T++VKP+E
Sbjct: 163 EPIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAE 201
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 477 NSLG*IYKRGPTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDP-QKSPDLCRIINNRH 653
+SL + +G C+A V + + ++F++ + + K W DP + ++ ++
Sbjct: 304 SSLAVFFNKGEICVAGSRVYVQEGIYDEFVKKAVEAAKNWKVGDPFDAATNMGPQVDKVQ 363
Query: 654 FSRLQQLIE 680
F R+ + IE
Sbjct: 364 FERVLKYIE 372
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IVFEGGPQETTELLKQ-RFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNT 450
+V P+ LL+ + I +TG T VG+ + + + V+LELGG +P V +
Sbjct: 279 VVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANTVKKVSLELGGNAPCIVFDD 338
Query: 451 VDIVVTAKRILWGKFINVGQLALLPTTYCARR 546
DI V K L KF N GQ T CA R
Sbjct: 339 ADIDVAIKGSLAAKFRNSGQ-----TCVCANR 365
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 77 VVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 214
+++ P GVV + WN+PL ++ + A+A G TV+VKPSE +
Sbjct: 211 LLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFT 256
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 20 DEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVK 199
++W KPE+ G + + + P GV+ I +WNYP + PM AI +GN ++K
Sbjct: 201 EKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYPFHNVFNPMLAAIFSGNAAVIK 260
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 340 YTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDI 459
++G V +I+ A+ L PVTLELGGK V VD+
Sbjct: 252 FSGNAAVIKIM-NRASDTLIPVTLELGGKDAFIVCEDVDL 290
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 86 YNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVK-PSELSV 217
Y PYG V +I +N+PL++ LL + GA+ GN ++K S++S+
Sbjct: 192 YRWPYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVDSKVSI 236
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 95 PYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKP 202
P GVVL I +NYP+ L + + A+ AGN +++KP
Sbjct: 161 PLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKP 196
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 LDNDAFIVFEGGPQETTEL-LKQRFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSP 432
L F F GG + L R + +TG T VG +V + LEL G +
Sbjct: 239 LPGSIFTAFCGGADIGQAISLDTRIPLVSFTGSTKVGLMVQQQVNARFGKCLLELSGNNA 298
Query: 433 VYVDNTVDIVVTAKRILWGKFINVGQLALLPTTYCARRRCRTSFWR 570
+ V + DI + + +L+ GQ T C R S +R
Sbjct: 299 IIVMDDADIQLAVRSVLFAAVGTAGQRC----TTCRRLLLHESIYR 340
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVK 199
+P GVV VI A+N+P +L A+ GN V+ K
Sbjct: 179 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 214
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVE 241
+P GV I +N+P + L A+ GNT ++KPSE + + E
Sbjct: 158 EPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAAMMLAE 207
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 450 RVIYVNWAFAAKFQCDRREIFGGGFVNNSTDVSASSVE 337
+VI +N+ ++ F+CD E GGGF + ++ +VE
Sbjct: 100 KVIAINFPLSSVFECDLSEQSGGGFAEYAVAQASLTVE 137
>04_01_0100 +
1034057-1034308,1034962-1035078,1035152-1035382,
1038200-1038455,1038551-1038807,1038978-1039250,
1039617-1039898,1040045-1040165,1040351-1040520,
1040613-1040711
Length = 685
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 624 RGISVGPLRTIPSGLSWRPPETC 556
R I VG L IP L+WRPP C
Sbjct: 614 RYIPVGLLDVIPQRLNWRPPSYC 636
>07_01_0448 - 3383706-3384761
Length = 351
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 500 TWANLHCSRLRTVHEGGAEQVSGGLQESPE 589
TWAN+H LR + GA +S G + +PE
Sbjct: 108 TWANVHSFCLRLAADAGAVVLSAGYRLAPE 137
>10_07_0113 -
12993300-12993413,12993493-12993775,12993856-12994026,
12994104-12994948,12995035-12995307,12995549-12995953
Length = 696
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 643 FMIRHRSGDFCGSSPYHSFRTFLE 572
F IR + GD CG YH+ R+F E
Sbjct: 628 FPIRQQVGDQCGFHVYHNMRSFAE 651
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 364 RIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILW 486
R V+EA + L +LG + DNT + V KR++W
Sbjct: 944 RNVFEAEVQKLEADRFQLGSEIATTGDNTWPMPVNLKRLIW 984
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 364 RIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILW 486
R V+EA + L +LG + DNT + V KR++W
Sbjct: 982 RNVFEAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIW 1022
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,909,127
Number of Sequences: 37544
Number of extensions: 511288
Number of successful extensions: 1462
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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