Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30300
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 52 6e-07
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 44 9e-05
SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 44 9e-05
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 44 2e-04
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 41 0.001
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 38 0.010
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 36 0.023
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.023
SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44) 33 0.22
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 30 2.0
SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041) 29 2.7
SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06) 29 3.5
SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021) 29 3.5
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 6.2
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 28 8.1
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 113 bits (271), Expect = 2e-25
Identities = 53/92 (57%), Positives = 63/92 (68%)
Frame = +1
Query: 250 KILDNDAFIVFEGGPQETTELLKQRFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKS 429
K LD D + V GG ET +LL Q+FD IFYTGG+ VG++V AA KNLT VTLELGGKS
Sbjct: 124 KYLDPDCYPVVNGGVPETQQLLNQKFDKIFYTGGSAVGKLVMAAAAKNLTRVTLELGGKS 183
Query: 430 PVYVDNTVDIVVTAKRILWGKFINVGQLALLP 525
P Y+D D+ A+RI WGKF N GQ + P
Sbjct: 184 PCYIDEDCDMKTVARRICWGKFTNSGQTCVAP 215
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +2
Query: 8 LHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNT 187
L L EW KP+ G VN +D I N+P GV L+I AWNYP+QL+ LP+ GAIA GN
Sbjct: 43 LEKLSEWMKPQPVETGIVNKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNC 102
Query: 188 VIVKPSELSVACSNFVVENLPKF 256
++KPSE++ A + V + +PK+
Sbjct: 103 AVLKPSEVASATAQLVADLVPKY 125
Score = 76.6 bits (180), Expect = 2e-14
Identities = 30/58 (51%), Positives = 45/58 (77%)
Frame = +3
Query: 504 GPTCIAPDYVLCTKEVQNKFLEASKKVLKEWYGEDPQKSPDLCRIINNRHFSRLQQLI 677
G TC+APDYVLC +Q+KF+++ K+ L E+YGEDP S D RI+N++H++RL+ L+
Sbjct: 209 GQTCVAPDYVLCNPGIQSKFIKSMKETLYEFYGEDPHDSADYGRIVNDKHYNRLKALL 266
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +2
Query: 92 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 214
+P GVV IGAWNYP+Q +A AIA GNT++ KPS L+
Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLT 449
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 277 VFEGGPQETTELLKQ--RFDYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNT 450
+ +GG ET E+L + + +TG G+ + + + VTLELGGKSP+ +
Sbjct: 472 IIQGGG-ETGEMLSKDPNVAKVSFTGSVPTGQKIMASCADGIKHVTLELGGKSPLIIFKD 530
Query: 451 VDIVVTAKRILWGKFINVGQL 513
D+ L F++ GQ+
Sbjct: 531 ADMANAVSGALMANFLSQGQV 551
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATK-NLTPVTLELGGKSP--VYVDNTVDIVV 465
D + +TG T VGR++ EA+ K NL +TLELGGKSP V+ D+ +D V
Sbjct: 548 DKVSFTGSTEVGRLIQEASAKSNLKRLTLELGGKSPNIVFADSDMDYAV 596
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 89 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
++P G+V I WN+PL + + +A A+A GN VI+KP+E
Sbjct: 465 HEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAE 504
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 62 NILDEVVIYN----DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 214
N L+ + N P GV +I WN PL LL +A A+A+G TV+ KPSE++
Sbjct: 131 NFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMT 185
>SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 1485
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 358 VGRIVYEAATK-NLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQLALLPTTY 534
VGR++ E A K NL VTLELGGKSP V D+ + G FIN GQ T
Sbjct: 1390 VGRLIQETAAKSNLKRVTLELGGKSPNIVFADADLDWAVEMSCLGLFINQGQCCCAGTRI 1449
Query: 535 CARRRCRTSFWR 570
F R
Sbjct: 1450 FVEESIHDEFVR 1461
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 89 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
++P GVV I WN+PL + L +A A+A G VI+KP+E
Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAE 1374
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 340 YTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQLAL 519
+TG T VG+ +Y+ + K L ++LELGG +P + + ++ ++ KF N GQ
Sbjct: 166 FTGSTAVGQDLYQKSAKTLKKLSLELGGNAPFIIFDDANLDKAVSGLINSKFRNAGQ--- 222
Query: 520 LPTTYCARR 546
T CA R
Sbjct: 223 --TCVCANR 229
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 74 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 205
+V+I +P GV I WN+P+ +L+ + AIA G T+I +PS
Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPS 117
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 53 GFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 205
G+ ++D + P GVV I WN+PL LL + A+A GNTV++KP+
Sbjct: 753 GWAQLMDTEMQGWKPVGVVGGIVPWNFPLMLLCWKVCPALAMGNTVVLKPA 803
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 328 DYIFYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVG 507
D + +TG T VG+++ + + ++LELGGKSP V ++ D+ + ++ + N G
Sbjct: 847 DKVAFTGSTEVGKLLRQLTAGSGKKLSLELGGKSPFVVFDSADLDSAVEGVVDAIWFNQG 906
Query: 508 QLA-----LLPTTYCARR 546
Q+ LL CA+R
Sbjct: 907 QVCSAGSRLLVQETCAQR 924
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 14 YLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVI 193
+ D+ TKPE P + ++P GV+ + L + +A AI GNTV+
Sbjct: 1269 FSDKDTKPEETP-----FYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVV 1323
Query: 194 VKPSE 208
+ PSE
Sbjct: 1324 IVPSE 1328
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 107 VLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACS 226
+L WN+PL ++ A A+AAG TVI+KPSE + C+
Sbjct: 143 LLTTEQWNFPLGMITRKAAAALAAGCTVIIKPSEETPFCA 182
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +1
Query: 340 YTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQLAL 519
+TG T G+I+ + ++LELGG +P V N+ +I K L K+ N Q
Sbjct: 227 FTGSTATGKILMAKCVDTVKKMSLELGGNAPFIVFNSANIESAVKGALICKYRNTAQ--- 283
Query: 520 LPTTYCARR 546
T CA R
Sbjct: 284 --TCICANR 290
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 101 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 208
GVV I AWN+PL L + A+A G T ++KP+E
Sbjct: 189 GVVGAIVAWNFPLLLACWKLGPALATGCTTVLKPAE 224
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 74 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 205
E+ +P GVV +I WN+P +A A+A GN ++ KP+
Sbjct: 134 EIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPA 177
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 340 YTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDI 459
+TG GR V A NL LE+G K+ + V + D+
Sbjct: 226 FTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADL 265
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 101 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 214
GVV +I +W+ L +L + A+A+GN V++KPS L+
Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLA 190
>SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44)
Length = 950
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = +1
Query: 100 RRGPRNRRLELSLAAPAFADGRSH-RCREHGYRETQRTI---SRLLEFC 234
++GP+ R+++ L+ A+A+ RSH ++H ++ Q+TI +L +C
Sbjct: 145 KKGPKGVRVDIDLSLSAYANARSHYERKKHSAKKEQKTIDHSEQLASYC 193
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 337 FYTGGTNVGRIVYEAATKNLTPVTLELGGKSPVYVDNTVDIVVTAKRILWGKFINVGQL 513
F T +I+ + ++LELGG +P V N+ DI + KF N Q+
Sbjct: 144 FQTWKKTTAKILMAKCVVTVKKMSLELGGNAPFVVFNSADIDKAVNGAVVYKFRNTAQV 202
>SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041)
Length = 999
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Frame = -1
Query: 630 IDRGISVGPLRTIPSGLSWRPPETCSAPPSCTVRSREQCKLAH-VYKFTPENSFCRHNYV 454
++ ++VGP + P T P + H V++ EN CR+ Y
Sbjct: 127 VNIAVAVGPFEIYVDPIM--PEVTNFCLPGLLANLKHSTAFLHDVFEMYEENLSCRYPYT 184
Query: 453 H-RVIYVNWAFAAKFQCDRREIFGGGFVNNSTDVSASSV--EDVVKPLFEQLSG 301
H + ++V+ A++ K IF +++S + + + + + L EQ G
Sbjct: 185 HYKQVFVDQAYSVKAAYASMSIFNTSLLHSSRIIDQTFITRRVLAQALAEQFFG 238
>SB_11487| Best HMM Match : Guanylate_cyc (HMM E-Value=2.3e-06)
Length = 360
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 582 VLKEWYGEDPQKSPDLCRIINNRHFSRLQQLIE 680
++++ + EDP++ P RI+ + R QQ++E
Sbjct: 229 LIRDCWAEDPEERPHFFRIVETQKDRRAQQVVE 261
>SB_11808| Best HMM Match : Glycos_transf_1 (HMM E-Value=0.0021)
Length = 496
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 537 CTKEVQNKFLEASKKVL-KEWYGEDPQKSPDLC 632
C E + +EA KKVL W+GE+ K P +C
Sbjct: 462 CLIEQLPEKVEARKKVLVPTWFGEERHKRPHIC 494
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 637 IRHRSGDFCGSSPYHSFRTFLEASRN 560
+RH S ++ S +H FR +LE S N
Sbjct: 2678 VRHLSTEYFNSPQHHGFRYYLECSLN 2703
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 523 PTTYCARRRCRTSFWRPPRKS*RNGTERTHRNP 621
PT + RR SF+RP R+S R E RNP
Sbjct: 77 PTQH-RRRSSNESFYRPARESVRRNPEGMSRNP 108
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 149 LLPMAGAIAAGNTVI-VKPSELSVACSNFVVENLPKFWIMMLSSYSKEVRKRPLSCSNR 322
+LP A + NTVI + P E+S N V++ LPK + + + + + +SC +R
Sbjct: 535 ILPKAVSCLHRNTVIQIFPKEVSCLHRNTVIQILPKAVLCLHRNTVIPILPKAVSCLHR 593
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,184,557
Number of Sequences: 59808
Number of extensions: 550121
Number of successful extensions: 1446
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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