Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30300
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.68 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   1.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   1.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   2.1  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.3  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 202 GFHDNRVPGSDGSGHRQKQELQGI 131
           G H N  P S  SG +Q+  LQG+
Sbjct: 812 GLHINSSPSSVQSGQQQQSVLQGL 835


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 197 KPSELSVACSNFVVENLPKFWIMMLSSYSKEVRKR 301
           K  E+      F+VEN P+ W  + + Y  + + R
Sbjct: 82  KQREVIKKVIKFLVENKPELWDSLANKYDPDKKYR 116


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 197 KPSELSVACSNFVVENLPKFWIMMLSSYSKEVRKR 301
           K  E+      F+VEN P+ W  + + Y  + + R
Sbjct: 82  KQREVIKKVIKFLVENKPELWDSLANKYDPDKKYR 116


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 197 KPSELSVACSNFVVENLPKFWIMMLSSYSKEVRKR 301
           K  E+      F+VEN P+ W  + + Y  + + R
Sbjct: 82  KQREVIKKVIKFLVENKPELWDSLANKYDPDKKFR 116


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 41  HPPKGFVNILDEVVIYNDP 97
           +PPKG  +   +V++ N P
Sbjct: 332 NPPKGAADFTAQVIVLNHP 350


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 570 PPETCSAPPSCTV 532
           PPET   PPS T+
Sbjct: 293 PPETQPTPPSATL 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,413
Number of Sequences: 438
Number of extensions: 4848
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)