Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30298
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    25   1.1  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.0  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   7.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   7.9  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    22   7.9  

>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 75  EKQLFFVIYSYLYC-CCQIPQIGIRKS 152
           EK L+  I  +++  CCQIP  GI  S
Sbjct: 30  EKVLWTAITLFIFLVCCQIPLFGIMSS 56


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +3

Query: 33  DKSMYYYLLQQSVIEKQLFFVIYSYLYCCCQIPQIGIRKSRNIKLKFIYY 182
           D S +Y  ++  ++E     V     Y CC  P + I  +  ++ K ++Y
Sbjct: 199 DLSEFYMSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFY 246


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +3

Query: 33  DKSMYYYLLQQSVIEKQLFFVIYSYLYCCCQIPQIGIRKSRNIKLKFIYY 182
           D S +Y  ++  ++E     V     Y CC  P + I  +  ++ K ++Y
Sbjct: 199 DLSEFYMSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFY 246


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 111 YCCCQIPQIGIRKSRNIKLKFIYY 182
           Y CC  P I I  +  I+ K +YY
Sbjct: 194 YNCCPEPYIDITFAILIRRKTLYY 217


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +3

Query: 33  DKSMYYYLLQQSVIEKQLFFVIYSYLYCCCQIPQIGIRKSRNIKLKFIYY 182
           D S +Y  ++  ++E     V     Y CC  P + I  +  ++ K ++Y
Sbjct: 195 DLSEFYTSVEWDILEVPA--VRNEKFYTCCDEPYLDITFNITMRRKTLFY 242


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 344 TLKFKLFEMTNQPN 303
           TL F LFE+ N P+
Sbjct: 318 TLSFALFELANNPD 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,631
Number of Sequences: 2352
Number of extensions: 5668
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)