Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30294
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005...    29   3.5  
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816...    28   6.2  

>02_05_0085 -
           25697860-25698142,25698631-25698946,25700481-25700518,
           25700955-25701036,25701815-25702016
          Length = 306

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -2

Query: 406 NSEYLMFDCVLQSH*PVLHRPHILKYIWQYFVPQQASLVLVDQW 275
           N   + ++C  +   P++  P + K  WQ  V +    VLV+ W
Sbjct: 89  NKPSIAWNCSFKEQTPIMKVPDVTKSTWQSLVVESELPVLVEFW 132


>06_03_1303 +
           29180837-29181205,29181289-29181306,29181337-29181622,
           29185008-29186284,29186499-29187005
          Length = 818

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 432 DWLQFCYAHWCRRSRWRTGFSKSWIVLEDFRSIP 533
           DWL +C     +R RW    ++S +V    R +P
Sbjct: 376 DWLSWCSVMLVKRRRWSASMAQSNLVTFCLRKLP 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,771,088
Number of Sequences: 37544
Number of extensions: 384062
Number of successful extensions: 708
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)