Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30294
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 125 5e-29
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 125 5e-29
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 125 5e-29
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 121 8e-28
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 121 8e-28
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 121 8e-28
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 121 8e-28
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 103 2e-22
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 103 2e-22
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 125 bits (302), Expect = 5e-29
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDLG G
Sbjct: 1542 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPG 1601
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1602 SCVPRFSTLPVLSCGQNNVCNYASR 1626
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1628 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1687
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1688 GYSFLMHTAVGNGGGGQALQSPGS 1711
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1713 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1772
Query: 690 V 692
V
Sbjct: 1773 V 1773
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1656 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1714
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1715 DFRATPFIECNGAKGTCHFYETMT 1738
Score = 37.9 bits (84), Expect = 0.013
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGS 507
+I HSQ+ +P+C G ELW GYS +++ L SPGS
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGS 1602
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 125 bits (302), Expect = 5e-29
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDLG G
Sbjct: 1542 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPG 1601
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1602 SCVPRFSTLPVLSCGQNNVCNYASR 1626
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1628 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1687
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1688 GYSFLMHTAVGNGGGGQALQSPGS 1711
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1713 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1772
Query: 690 V 692
V
Sbjct: 1773 V 1773
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1656 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1714
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1715 DFRATPFIECNGAKGTCHFYETMT 1738
Score = 37.9 bits (84), Expect = 0.013
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGS 507
+I HSQ+ +P+C G ELW GYS +++ L SPGS
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGS 1602
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 125 bits (302), Expect = 5e-29
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDLG G
Sbjct: 1542 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDLGSPG 1601
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1602 SCVPRFSTLPVLSCGQNNVCNYASR 1626
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1628 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1687
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1688 GYSFLMHTAVGNGGGGQALQSPGS 1711
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1713 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1772
Query: 690 V 692
V
Sbjct: 1773 V 1773
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1656 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1714
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1715 DFRATPFIECNGAKGTCHFYETMT 1738
Score = 37.9 bits (84), Expect = 0.013
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFVMHTXXXXXXXXXXLASPGS 507
+I HSQ+ +P+C G ELW GYS +++ L SPGS
Sbjct: 1557 LITRHSQSETVPACSAGHTELWTGYS-LLYVDGNDYAHNQDLGSPGS 1602
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1624 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1683
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1684 GYSFLMHTAVGNGGGGQALQSPGS 1707
Score = 118 bits (284), Expect = 8e-27
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDL G
Sbjct: 1541 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDL---G 1597
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1598 SCVPRFSTLPVLSCGQNNVCNYASR 1622
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1709 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1768
Query: 690 V 692
V
Sbjct: 1769 V 1769
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1652 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1710
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1711 DFRATPFIECNGAKGTCHFYETMT 1734
Score = 34.7 bits (76), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFV 450
+I HSQ+ +P+C G ELW GYS +
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLL 1583
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 270 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 329
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 330 GYSFLMHTAVGNGGGGQALQSPGS 353
Score = 118 bits (284), Expect = 8e-27
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDL G
Sbjct: 187 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDL---G 243
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 244 SCVPRFSTLPVLSCGQNNVCNYASR 268
Score = 79.0 bits (186), Expect = 6e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 355 LEDFRATPFIECNGAKGTCHFYETITSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 414
Query: 690 V 692
V
Sbjct: 415 V 415
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 298 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 356
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 357 DFRATPFIECNGAKGTCHFYETIT 380
Score = 34.7 bits (76), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFV 450
+I HSQ+ +P+C G ELW GYS +
Sbjct: 202 LITRHSQSETVPACSAGHTELWTGYSLL 229
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1624 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1683
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1684 GYSFLMHTAVGNGGGGQALQSPGS 1707
Score = 118 bits (284), Expect = 8e-27
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDL G
Sbjct: 1541 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDL---G 1597
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1598 SCVPRFSTLPVLSCGQNNVCNYASR 1622
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1709 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1768
Query: 690 V 692
V
Sbjct: 1769 V 1769
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1652 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1710
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1711 DFRATPFIECNGAKGTCHFYETMT 1734
Score = 34.7 bits (76), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFV 450
+I HSQ+ +P+C G ELW GYS +
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLL 1583
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 121 bits (292), Expect = 8e-28
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMMPVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNELWI 435
D+++WL+T IPMMPVE I +YISRCVVCE PANVIAVHSQT+++P CP GW LWI
Sbjct: 1624 DKTFWLTTNAAIPMMPVENIEIRQYISRCVVCEAPANVIAVHSQTIEVPDCPNGWEGLWI 1683
Query: 436 GYSFVMHTXXXXXXXXXXLASPGS 507
GYSF+MHT L SPGS
Sbjct: 1684 GYSFLMHTAVGNGGGGQALQSPGS 1707
Score = 118 bits (284), Expect = 8e-27
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PGAPC-VSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAG 178
PGAP + D+LTGIL+ RHSQ E VP C H +LW GYSLLY+DGN+ AHNQDL G
Sbjct: 1541 PGAPAPAALDYLTGILITRHSQSETVPACSAGHTELWTGYSLLYVDGNDYAHNQDL---G 1597
Query: 179 SCVRKFSTMPFLFCDLNDVCNYASR 253
SCV +FST+P L C N+VCNYASR
Sbjct: 1598 SCVPRFSTLPVLSCGQNNVCNYASR 1622
Score = 79.8 bits (188), Expect = 3e-15
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LEDFR+ PFIECNG GTCH + SFW+ +E SQ F P++QT+K+G+ VSRC
Sbjct: 1709 LEDFRATPFIECNGAKGTCHFYETMTSFWMYNLESSQPFERPQQQTIKAGERQSHVSRCQ 1768
Query: 690 V 692
V
Sbjct: 1769 V 1769
Score = 39.5 bits (88), Expect = 0.004
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVR 190
CV + ++ V HSQ VP C LW GYS L++ Q L GSC+
Sbjct: 1652 CVVCEAPANVIAV-HSQTIEVPDCPNGWEGLWIGYSFLMHTAVGNGGGGQALQSPGSCLE 1710
Query: 191 KFSTMPFLFCD-LNDVCNYASRTT 259
F PF+ C+ C++ T
Sbjct: 1711 DFRATPFIECNGAKGTCHFYETMT 1734
Score = 34.7 bits (76), Expect = 0.12
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYSFV 450
+I HSQ+ +P+C G ELW GYS +
Sbjct: 1556 LITRHSQSETVPACSAGHTELWTGYSLL 1583
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 103 bits (248), Expect = 2e-22
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMM--PVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNEL 429
D S WLST +P+PM P++G+++ KYISRCVVCE +IA+HSQ++ IP CP GW E+
Sbjct: 1586 DDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEM 1645
Query: 430 WIGYSFVMHTXXXXXXXXXXLASPGS 507
W GYS+ M T L SPGS
Sbjct: 1646 WTGYSYFMSTLDNVGGVGQNLVSPGS 1671
Score = 76.2 bits (179), Expect = 4e-14
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 38 GILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 217
G + RHSQ VPQC + LW+GYSL +A QDLG +GSC+ +F+TMP++
Sbjct: 1513 GFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYML 1572
Query: 218 CDLNDVCNYA 247
CD+ +VC++A
Sbjct: 1573 CDITNVCHFA 1582
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LE+FR+ P IEC+G G C+++ SFWLT +E+ QF P +QTLK+ ++SRC
Sbjct: 1673 LEEFRAQPVIECHGHG-RCNYYDALASFWLTVIEEQDQFVQPRQQTLKA-DFTSKISRCT 1730
Query: 690 V 692
V
Sbjct: 1731 V 1731
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYID-GNEKAHNQDLGYAGSCVR 190
CV + T I+ + HSQ +P C ++W GYS N Q+L GSC+
Sbjct: 1616 CVVCETTTRIIAL-HSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLE 1674
Query: 191 KFSTMPFLFCDLNDVCNY 244
+F P + C + CNY
Sbjct: 1675 EFRAQPVIECHGHGRCNY 1692
Score = 35.5 bits (78), Expect = 0.069
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYS 444
+ A HSQ++ +P CP N LW GYS
Sbjct: 1515 IFARHSQSVHVPQCPANTNLLWEGYS 1540
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 103 bits (248), Expect = 2e-22
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 DRSYWLSTGQPIPMM--PVEGQNIAKYISRCVVCEVPANVIAVHSQTLDIPSCPVGWNEL 429
D S WLST +P+PM P++G+++ KYISRCVVCE +IA+HSQ++ IP CP GW E+
Sbjct: 1588 DDSLWLSTAEPMPMTMTPIQGRDLMKYISRCVVCETTTRIIALHSQSMSIPDCPGGWEEM 1647
Query: 430 WIGYSFVMHTXXXXXXXXXXLASPGS 507
W GYS+ M T L SPGS
Sbjct: 1648 WTGYSYFMSTLDNVGGVGQNLVSPGS 1673
Score = 76.2 bits (179), Expect = 4e-14
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 38 GILLVRHSQREVVPQCEPSHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 217
G + RHSQ VPQC + LW+GYSL +A QDLG +GSC+ +F+TMP++
Sbjct: 1515 GFIFARHSQSVHVPQCPANTNLLWEGYSLSGNVAASRAVGQDLGQSGSCMMRFTTMPYML 1574
Query: 218 CDLNDVCNYA 247
CD+ +VC++A
Sbjct: 1575 CDITNVCHFA 1584
Score = 61.3 bits (142), Expect = 1e-09
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +3
Query: 510 LEDFRSIPFIECNGEGGTCHHFANKLSFWLTTVEDSQQFNVPERQTLKSGQLLERVSRCA 689
LE+FR+ P IEC+G G C+++ SFWLT +E+ QF P +QTLK+ ++SRC
Sbjct: 1675 LEEFRAQPVIECHGHG-RCNYYDALASFWLTVIEEQDQFVQPRQQTLKA-DFTSKISRCT 1732
Query: 690 V 692
V
Sbjct: 1733 V 1733
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 14 CVSQDFLTGILLVRHSQREVVPQCEPSHVKLWDGYSLLYID-GNEKAHNQDLGYAGSCVR 190
CV + T I+ + HSQ +P C ++W GYS N Q+L GSC+
Sbjct: 1618 CVVCETTTRIIAL-HSQSMSIPDCPGGWEEMWTGYSYFMSTLDNVGGVGQNLVSPGSCLE 1676
Query: 191 KFSTMPFLFCDLNDVCNY 244
+F P + C + CNY
Sbjct: 1677 EFRAQPVIECHGHGRCNY 1694
Score = 35.5 bits (78), Expect = 0.069
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 367 VIAVHSQTLDIPSCPVGWNELWIGYS 444
+ A HSQ++ +P CP N LW GYS
Sbjct: 1517 IFARHSQSVHVPQCPANTNLLWEGYS 1542
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,923,940
Number of Sequences: 53049
Number of extensions: 670200
Number of successful extensions: 1393
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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