Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30293
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 150 8e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 150 8e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 150 8e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 150 8e-37
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 6e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 64 6e-11
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 56 2e-08
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 46 2e-05
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 45 4e-05
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 30 1.3
At4g17785.1 68417.m02654 myb family transcription factor (MYB39)... 30 1.7
At3g26890.2 68416.m03365 expressed protein 30 1.7
At3g26890.1 68416.m03364 expressed protein 30 1.7
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 29 2.2
At2g39560.1 68415.m04853 expressed protein 29 3.9
At2g19330.1 68415.m02255 leucine-rich repeat family protein cont... 29 3.9
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.2
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.2
At1g27900.1 68414.m03419 RNA helicase, putative similar to SP|Q1... 28 5.2
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.8
At5g13580.1 68418.m01570 ABC transporter family protein 28 6.8
At4g01310.1 68417.m00171 ribosomal protein L5 family protein con... 28 6.8
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 9.0
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 9.0
At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.0
At1g35610.1 68414.m04421 DC1 domain-containing protein contains ... 27 9.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 150 bits (364), Expect = 8e-37
Identities = 67/83 (80%), Positives = 77/83 (92%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEAL 438
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP + TEVKSVEMHHE+L
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESL 287
Query: 439 QEAVPGDNVGFNVKNVSVKELRR 507
EA+PGDNVGFNVKNV+VK+L+R
Sbjct: 288 LEALPGDNVGFNVKNVAVKDLKR 310
Score = 91.9 bits (218), Expect = 4e-19
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 2 KMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 181
KMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 536 PT*GCCRFYSSSHCA*PSWSISNGYTPVLDCHTXHIACKFAEIKEKVDRRTGK 694
P G F S I NGY PVLDCHT HIA KF+EI K+DRR+GK
Sbjct: 321 PAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGK 373
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 510 YVAGDSKNNPPKGAADFTAQVIVLNHPGQ 596
YVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 312 YVASNSKDDPAKGAANFTSQVIIMNHPGQ 340
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 8e-37
Identities = 67/83 (80%), Positives = 77/83 (92%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEAL 438
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP + TEVKSVEMHHE+L
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESL 287
Query: 439 QEAVPGDNVGFNVKNVSVKELRR 507
EA+PGDNVGFNVKNV+VK+L+R
Sbjct: 288 LEALPGDNVGFNVKNVAVKDLKR 310
Score = 91.9 bits (218), Expect = 4e-19
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 2 KMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 181
KMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 536 PT*GCCRFYSSSHCA*PSWSISNGYTPVLDCHTXHIACKFAEIKEKVDRRTGK 694
P G F S I NGY PVLDCHT HIA KF+EI K+DRR+GK
Sbjct: 321 PAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGK 373
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 510 YVAGDSKNNPPKGAADFTAQVIVLNHPGQ 596
YVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 312 YVASNSKDDPAKGAANFTSQVIIMNHPGQ 340
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 8e-37
Identities = 67/83 (80%), Positives = 77/83 (92%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEAL 438
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP + TEVKSVEMHHE+L
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESL 287
Query: 439 QEAVPGDNVGFNVKNVSVKELRR 507
EA+PGDNVGFNVKNV+VK+L+R
Sbjct: 288 LEALPGDNVGFNVKNVAVKDLKR 310
Score = 91.9 bits (218), Expect = 4e-19
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 2 KMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 181
KMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 536 PT*GCCRFYSSSHCA*PSWSISNGYTPVLDCHTXHIACKFAEIKEKVDRRTGK 694
P G F S I NGY PVLDCHT HIA KF+EI K+DRR+GK
Sbjct: 321 PAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGK 373
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 510 YVAGDSKNNPPKGAADFTAQVIVLNHPGQ 596
YVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 312 YVASNSKDDPAKGAANFTSQVIIMNHPGQ 340
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 150 bits (364), Expect = 8e-37
Identities = 67/83 (80%), Positives = 77/83 (92%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEAL 438
RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP + TEVKSVEMHHE+L
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESL 287
Query: 439 QEAVPGDNVGFNVKNVSVKELRR 507
EA+PGDNVGFNVKNV+VK+L+R
Sbjct: 288 LEALPGDNVGFNVKNVAVKDLKR 310
Score = 91.9 bits (218), Expect = 4e-19
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +2
Query: 2 KMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 181
KMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 154 KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 536 PT*GCCRFYSSSHCA*PSWSISNGYTPVLDCHTXHIACKFAEIKEKVDRRTGK 694
P G F S I NGY PVLDCHT HIA KF+EI K+DRR+GK
Sbjct: 321 PAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGK 373
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 510 YVAGDSKNNPPKGAADFTAQVIVLNHPGQ 596
YVA +SK++P KGAA+FT+QVI++NHPGQ
Sbjct: 312 YVASNSKDDPAKGAANFTSQVIIMNHPGQ 340
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.5 bits (150), Expect = 6e-11
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +1
Query: 247 PATARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV--VFAPANIXTEVKSVE 420
P R T+ P L ++DV+ I G GTV GRVE G +K G V V V VE
Sbjct: 278 PIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVE 337
Query: 421 MHHEALQEAVPGDNVGFNVKNVSVKELRRVMLLVTP 528
M + L EA+ GDNVG ++ + +++R M+L P
Sbjct: 338 MFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKP 373
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.5 bits (150), Expect = 6e-11
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Frame = +1
Query: 199 GRQS*RKMPH*SSRCHPATARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVV 378
GRQ+ K+ P R DKP +P++DV+ I G GTV GR+E GV+K G V
Sbjct: 242 GRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVE 301
Query: 379 F-----APANIXTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRVMLLVTP 528
+ + V VEM + L GDNVG ++ + ++++R M++ P
Sbjct: 302 ILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVIAKP 356
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +2
Query: 596 ISNGYTPVLDCHTXHIACKFAEIKEKVDRRTG 691
I NGYTPVLDCHT HIA KF+EI K+D RTG
Sbjct: 7 IKNGYTPVLDCHTSHIAVKFSEILTKIDWRTG 38
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEA 435
R KPL +P+ D + G V G++E G ++PG+ V+ P+ ++S+E +A
Sbjct: 462 RDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPSGDQGTIRSLERDSQA 521
Query: 436 LQEAVPGDNVGFNVKNVSVKELRRVMLLVTPK-----TTHLRVLQILQLKSLCLTILVNL 600
A GDNV ++ + ++ +L P THL L +L L+ +L +
Sbjct: 522 CTIARAGDNVALALQGIDANQVMAGDVLCHPDFPVSVATHLE-LMVLVLEGATPILLGSQ 580
Query: 601 KRLH 612
H
Sbjct: 581 LEFH 584
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +2
Query: 26 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTK--MPWFKG 181
YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS W++G
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNRLSSWYQG 447
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = +1
Query: 259 RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANIXTEVKSVEMHHEAL 438
R + P R+P+ D +K +GTV +G+VE+G ++ G +V P +V ++ + +
Sbjct: 325 RDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPNKEQVKVVAIYCDEDKV 382
Query: 439 QEAVPGDNVGFNVKNVSVKELRRVMLL------VTPKTTHLRVLQILQL 567
+ A PG+N+ + + +++ +L V T + LQIL+L
Sbjct: 383 KRAGPGENLRVRITGIEDEDILSGFVLSSIVNPVPAVTEFVAQLQILEL 431
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +2
Query: 2 KMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPW 172
KMD +S+ R++EI++++ ++K GYN V F+PISG G NM + + PW
Sbjct: 248 KMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW 307
Query: 173 FKG 181
+ G
Sbjct: 308 WSG 310
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 247 PATARPTDKPLRLPLQDVYKIGGIGTVPVG 336
P T KPL++P D+ I GI VP G
Sbjct: 252 PVTGENLGKPLKIPPDDLINIAGISQVPDG 281
>At4g17785.1 68417.m02654 myb family transcription factor (MYB39)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 360
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 480 ERVRQGIAXCYVAGDSKNNPPKGAADFTAQVIVLNHPGQSQ 602
+ +R G+ CY P G+ + + LNHP +Q
Sbjct: 280 DHIRTGMMPCYYGDQLLETPSTGSVSVSPETTSLNHPSTAQ 320
>At3g26890.2 68416.m03365 expressed protein
Length = 649
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = -2
Query: 255 SGRMASRASMRHFPSALPSLRSTCHPLNQ---GIL----VEGSNMLSPCHPEMGTKATAA 97
SGR R+ + F +L + R +C P NQ G L + G N +SP ++ T+A
Sbjct: 354 SGRPIQRSLVGSFEESLLTGRLSCGPTNQKIDGFLAVLSIAGGN-ISPKSQKLPFSVTSA 412
Query: 96 GL*PIFLMYEDTSFLISSNLGSLYGGSVES 7
G + L Y S L +G V++
Sbjct: 413 GDDCLLLYYASIDLAGGSKLNKFWGQKVKT 442
>At3g26890.1 68416.m03364 expressed protein
Length = 649
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = -2
Query: 255 SGRMASRASMRHFPSALPSLRSTCHPLNQ---GIL----VEGSNMLSPCHPEMGTKATAA 97
SGR R+ + F +L + R +C P NQ G L + G N +SP ++ T+A
Sbjct: 354 SGRPIQRSLVGSFEESLLTGRLSCGPTNQKIDGFLAVLSIAGGN-ISPKSQKLPFSVTSA 412
Query: 96 GL*PIFLMYEDTSFLISSNLGSLYGGSVES 7
G + L Y S L +G V++
Sbjct: 413 GDDCLLLYYASIDLAGGSKLNKFWGQKVKT 442
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = -2
Query: 531 FWSHQQHNTXQFLDGHVLYVETYIVSRYSFLESFVVHLHRFDFSXDVGGGKDNNGTWFQH 352
FW + QH+ +F + H L + ++++S + + +F + GG NNG F
Sbjct: 181 FWLNVQHD--EFYEQHNLSMSSFLLSTSRTVSIDFISSPEVNFFRKIAGGFGNNGPSFVF 238
Query: 351 TSFNSADGHGTNTTDFVYVL 292
D T + +L
Sbjct: 239 QFMGKEDFEPTTNRTYGSIL 258
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 371 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 267
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At2g19330.1 68415.m02255 leucine-rich repeat family protein
contains leucine rich repeats, Pfam:PF00560
Length = 380
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 457 DNVGFNVKNVSVKELRRVMLLVTP-KTTHLRVLQILQLKSLCLTIL 591
D++GF + N+ + L+ P THL L++L + CL IL
Sbjct: 170 DSIGFELTNLRKLSINSNKLISLPISITHLTSLRVLDARLNCLMIL 215
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 82 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 183
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 29 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 118
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At1g27900.1 68414.m03419 RNA helicase, putative similar to
SP|Q14562 ATP-dependent helicase DDX8 (RNA helicase
HRH1) (DEAH-box protein 8) {Homo sapiens}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 700
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3
Query: 473 LKPTLSPGTASWRASWCISTDLTSVXMLAGAKTTMVPGFNTP 348
L+P+LS + C+S LT V ML+ A+TT++P + P
Sbjct: 428 LEPSLSRTLIEANETGCLSQALTVVAMLS-AETTLLPARSKP 468
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 35 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 145
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 422 ISTDLTSVXMLAGAKTTMVPGFNTPVSTLPTGTVP 318
IS ++ +++GA TT ++PVST+PT P
Sbjct: 384 ISASISKGKLVSGATTTTHSSGSSPVSTIPTFANP 418
>At4g01310.1 68417.m00171 ribosomal protein L5 family protein
contains Pfam profiles PF00673: ribosomal L5P family
C-terminus, PF00281: ribosomal protein L5
Length = 262
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +1
Query: 238 RCHPATARPTDKPLRLPLQDVYKIGGIGTVPVGRVE---TGVLKPGTIVVFAPANIXTEV 408
R P A + + L PL++V K+ GTV V + E T LK + PA + E
Sbjct: 17 RFSPLAAPSSARMLSPPLRNVVKVSASGTVLVEKSEAEKTQRLKTAYLERIIPA-LKEEF 75
Query: 409 KSVEMHH-EALQEAVPGDNVGFNVKN 483
K V +H +Q+ V +G +N
Sbjct: 76 KYVNIHQVPKVQKIVVNCGIGDAAQN 101
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 11 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 124
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 11 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 124
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 558 FTAQVIVLNHPGQSQTVTHQCWIATLXTLPANL 656
++ Q+++L+HP +TH W +TL + A L
Sbjct: 355 WSPQMLILSHPSVGGFLTHCGWNSTLEGITAGL 387
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 558 FTAQVIVLNHPGQSQTVTHQCWIATLXTLPANL 656
++ Q+++L+HP +TH W +TL + A L
Sbjct: 355 WSPQMLILSHPSVGGFLTHCGWNSTLEGITAGL 387
>At1g35610.1 68414.m04421 DC1 domain-containing protein contains
Pfam protein PF03107 DC1 domain
Length = 612
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 367 YLVSTHQFQLCRRARYQYHRFCIRLA 290
Y + +HQF C++ Y H C L+
Sbjct: 334 YPIVSHQFYHCKKCNYSLHEVCAGLS 359
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,054,950
Number of Sequences: 28952
Number of extensions: 381006
Number of successful extensions: 1346
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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