Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30292
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.69 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   3.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 418 NGAGP*RRVGFLWVCMSGVTLRKELVNVRLD*F 320
           N  GP +R+ F +V  +G  ++K +VN  +  F
Sbjct: 282 NIRGPRKRLRFAYVTRTGANIKKLIVNTWISLF 314


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 625 LPADRQGGVATTEHVHNVVH 566
           +P  R GGV + EH H   H
Sbjct: 10  MPDMRNGGVVSAEHPHQHQH 29


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 625 LPADRQGGVATTEHVHNVVH 566
           +P  R GGV + EH H   H
Sbjct: 10  MPDMRNGGVVSAEHPHQHQH 29


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 393 TLRQGPAPFKATSAAG 440
           +LR+G APF  ++ AG
Sbjct: 278 SLREGAAPFMVSATAG 293


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 487 GGLSSCPAPGCGSGL 443
           GGLS  P P  G GL
Sbjct: 89  GGLSGMPMPALGFGL 103


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 223 TASPGRTSPSAP 258
           T  PGR SPS+P
Sbjct: 59  TLDPGRKSPSSP 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 483  PPVFTRDGKSGLSSTKRATPIW 548
            PP  T    +G SST+   P W
Sbjct: 1014 PPQVTTGVDTGASSTEHMHPDW 1035


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 405 GPAPFKATSAAGHKPLPQPGA 467
           GP P    S  G  P   PGA
Sbjct: 102 GPIPVSMASKMGLAPTGHPGA 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,715
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)