Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30292
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0850 + 21862110-21862394,21862555-21862723,21862901-218629... 87 1e-17
03_05_0954 - 29113938-29114024,29114277-29114444,29115156-291152... 47 1e-05
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 30 1.7
04_04_0869 - 28883688-28884983 29 2.3
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528... 29 2.3
12_02_0162 - 14677634-14678003,14679359-14679420,14680785-14681000 29 3.0
08_02_0842 + 21754800-21754932,21755513-21756267 29 3.0
07_03_0815 + 21707061-21707112,21707394-21708286,21709289-217094... 29 3.0
02_04_0404 + 22626709-22628601 29 3.0
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 29 4.0
12_01_0118 - 898490-899104 28 5.3
05_03_0085 - 8271718-8272005,8272110-8272393,8273610-8274012,827... 28 5.3
04_04_0499 + 25674024-25674233,25674515-25675072,25675320-256754... 28 5.3
11_01_0780 - 6531579-6531608,6531732-6532064,6533219-6533325,653... 28 7.0
06_03_0339 - 19687749-19690805 28 7.0
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 28 7.0
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 28 7.0
09_04_0260 - 16197522-16197669,16198027-16198130,16198508-161987... 27 9.2
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 27 9.2
>08_02_0850 +
21862110-21862394,21862555-21862723,21862901-21862965,
21863632-21863905,21863998-21864145,21864237-21864346,
21864440-21864495,21864568-21864624,21864733-21864876,
21865304-21865351
Length = 451
Score = 87.0 bits (206), Expect = 1e-17
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = +2
Query: 56 QFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVWSGKGSAXXXXXXX 232
+FY+N+VL ++K KD HVEW +A +L + L+ YVK F+ G VW GS+
Sbjct: 168 EFYSNKVLVEYKSKDPDHVEWAKALKELFVPSLRDYVKTFYPLGPVWQPPGSSTSKAPSA 227
Query: 233 XXXXXXXXXCCQTWTSPTCRSMTAALSSPKSIEANIN*LLAQSDAGHADPQESDSPSRPS 412
+S M+A + S ++ L + AD + + R
Sbjct: 228 PCPPSASLFSSSAQSSQPKTGMSAVFAEISSGKSMTQGLRTVT----ADMKSKNRTDRTG 283
Query: 413 AVQSDVGXXXXXXXXXXXXXXXXXXXLHSGRQKWLIEYQKGNSNLVVENADMNNVVYMFR 592
V ++ G L GR KW++E+ GN NLV+E+ D +Y+F
Sbjct: 284 VVAAE-GKEAHKKPSSSSTKLPSKLELQMGR-KWIVEHHVGNKNLVIEDCDTKQSIYVFG 341
Query: 593 CRDSALTVRGK 625
C+DS L V+GK
Sbjct: 342 CKDSVLQVKGK 352
>03_05_0954 -
29113938-29114024,29114277-29114444,29115156-29115212,
29115314-29115369,29115463-29115572,29116142-29116310,
29116418-29116742,29117378-29117442,29117541-29117712,
29118191-29118484
Length = 500
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 491 LHSGRQKWLIEYQKGNSNLVVENADMNNVVYMFRCRDSALTVRGK 625
L GR KW++E Q G NL +++ D VY++ C+DS L V GK
Sbjct: 337 LQMGR-KWVVENQVGKKNLAIDDCDARQSVYVYGCKDSVLQVNGK 380
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 56 QFYTNRVLKDWKEKDKTHVEWCRAWVQL-LSDLQAYVKQFHTTGLVWSGKGSA 211
+FY N+VL +++ KD HVEW +A +L + L+ +VK+ + G W G A
Sbjct: 172 EFYNNKVLVEYRNKDADHVEWAKALKELYMPGLRDFVKKHYPLGPSWGPVGGA 224
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 327 SRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAG 470
S + +T+ LRKVT DM+T KN + R G +T+A P AG
Sbjct: 279 SGKAVTTGLRKVTDDMKT-KNRSDRSGVVS-SSTAAPAAAPEKTSRAG 324
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 300 PQRSLRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLD 479
PQ S + + S RTL +++ K+P+ + S+ G P P +
Sbjct: 271 PQGSSKMSTSHRTLAAAVEAAVAARDRSKSPSPGSIVSTPSYPSSPGATMSPAPAS---- 326
Query: 480 KPPVFTRDGKSGLSSTK 530
PP+F+ G+SG S K
Sbjct: 327 -PPLFSSPGQSGRRSVK 342
>04_04_0869 - 28883688-28884983
Length = 431
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 523 LDKPLLPSRVKTGGLSSCPAPGCGSGLCPAADVALNGAGP 404
+D LLP + G S PAPG S + PAA A G+ P
Sbjct: 318 VDSVLLPPELFGGAPSPAPAPGPASDV-PAASPAPEGSSP 356
>04_03_1031 + 21850857-21851009,21852229-21852350,21852447-21852891,
21852981-21853087,21853192-21854524,21854632-21854859,
21854951-21855181,21855278-21855537,21855651-21856113
Length = 1113
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 348 SLRKVTPDMQTHKNPTLRQG---PAPFKATSAAGHKPLPQPGAGQLDK 482
SL+ + D H P LR G PAP ++SAA LP+ ++DK
Sbjct: 865 SLQALPADHAQHVVPVLRAGHGAPAPQASSSAASSSGLPECKGEKIDK 912
>12_02_0162 - 14677634-14678003,14679359-14679420,14680785-14681000
Length = 215
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 429 SAAGHKPLPQPGAGQLDKPPVFTRDGKSGLSSTKRATPIWW 551
S +P+ + G G L + V + GKSG++ST+R+ WW
Sbjct: 27 SKISDRPIRERGGGGLSQGGVIGK-GKSGITSTRRS---WW 63
>08_02_0842 + 21754800-21754932,21755513-21756267
Length = 295
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +1
Query: 376 RPTRIRLSVKAQRRSKRRRPPDTSRCHSPAPDN*TSRPSSL-----GTAKVAYRVPKGQL 540
RPT+ RL RRS PP +S SP+P+ ++P S G ++ R +G +
Sbjct: 53 RPTQGRLG---SRRSGHPFPPPSSFSASPSPERPPAKPRSRKDGGGGASRQLARAARG-V 108
Query: 541 QFGGRERGHEQRCV 582
GG + H Q CV
Sbjct: 109 TLGGGDDNH-QICV 121
>07_03_0815 +
21707061-21707112,21707394-21708286,21709289-21709459,
21709880-21710143,21710404-21710421
Length = 465
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 605 RSRDNGTCTQRCSCPRSRPPNW 540
R +D C CSC RPPNW
Sbjct: 370 RYKDQDVCPPNCSC--DRPPNW 389
>02_04_0404 + 22626709-22628601
Length = 630
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 226 ASPGRTSPSAPVLPDVDFSNL 288
ASP T+P +P+ PDVD S L
Sbjct: 198 ASPLATAPMSPLFPDVDLSEL 218
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 269 SGSTGAEGEVLPGEAVGXXQHCPCQTT 189
SG+ EG+ + G AVG H C TT
Sbjct: 706 SGAAAGEGDPVSGAAVGGDDHTGCGTT 732
>12_01_0118 - 898490-899104
Length = 204
Score = 28.3 bits (60), Expect = 5.3
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = -2
Query: 617 GPSGRSRDNGTCTQRCSCPRSRPPNWSCPFGTR*-ATFAVPSEDGRLV*LSGAGLWQRLV 441
G S R D RCS P + SC G A D R G G+W+R +
Sbjct: 52 GTSERRDDAFLPCSRCS-PSGAAADGSCDSGRLGDGDHAGLGNDDR----GGGGVWRRRI 106
Query: 440 S--GGRRRFERRWALTESRI 387
GGR R+ RRW RI
Sbjct: 107 QWWGGRWRWIRRWGGLRRRI 126
>05_03_0085 -
8271718-8272005,8272110-8272393,8273610-8274012,
8274792-8274816,8275686-8276149
Length = 487
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 366 PDMQTHKNPTLRQGPAPFKATSAAGHK---PLPQPGAG 470
P ++ P+LR GP PF++T+ + P PG G
Sbjct: 83 PSTDFNEPPSLRTGPGPFRSTTRQSPRQFCPKENPGLG 120
>04_04_0499 +
25674024-25674233,25674515-25675072,25675320-25675415,
25675509-25675601,25675882-25676125,25676239-25676276,
25676377-25676478
Length = 446
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/62 (29%), Positives = 23/62 (37%)
Frame = +3
Query: 303 QRSLRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDK 482
QR LR R SL ++ T+ GP P + AA P P P +
Sbjct: 137 QRWLREESRWRAERESLLAEIAALRLRLG-TVEAGPLPLPSVDAAVASPAPSPAVAAVPP 195
Query: 483 PP 488
PP
Sbjct: 196 PP 197
>11_01_0780 -
6531579-6531608,6531732-6532064,6533219-6533325,
6534267-6534316,6535110-6537065,6537458-6538209
Length = 1075
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 590 GTCTQRCSCPRSRPPNW 540
G CT R +CP+ PNW
Sbjct: 127 GRCTSRFTCPQIPAPNW 143
>06_03_0339 - 19687749-19690805
Length = 1018
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 139 QLDPSAAPLYVGLVFLFPILEHAVSVELAGVIHFLNVRSRSGSN 8
+LDP+A PL G+ F + E SV++ G ++ S SG+N
Sbjct: 693 ELDPAALPLNFGVAFASVVPESCCSVKVQG-SGAEHIGSSSGNN 735
>05_07_0128 +
27879969-27880143,27880232-27881323,27883562-27883698,
27884179-27884409,27884707-27884730
Length = 552
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 326 LISAKRALRSSSDKLEKSTSGSTGAEGEVLPGEAVGXXQHCPCQTTQVLLCE 171
L++A + SSSD+ S+ A +L A+ P TTQ+ C+
Sbjct: 176 LLAATSSSSSSSDRSSGSSKSVKPAAAALLTSAAIDLFSPAPAPTTQLPACQ 227
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 490 TGGLSSCPAPGCGSGLCPAADVALNGAG 407
TGG SS PA SGLC AA + +G G
Sbjct: 272 TGGSSSGPAALVSSGLCSAA-IGTDGGG 298
>09_04_0260 -
16197522-16197669,16198027-16198130,16198508-16198719,
16198795-16198900,16199006-16199119,16199200-16199417,
16199837-16199900,16199982-16200335,16200609-16200767,
16201486-16202907
Length = 966
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = -3
Query: 517 KPLLPSRVKTGGLSSCPAPGCGSGLCPAADVALNGAGP*RRVGFLWVCMSGV 362
K L PS G + PA GSG PA A GAG +G + SGV
Sbjct: 75 KRLKPSSSCCSGKENRPA-AAGSGRAPAGRAASKGAGVGETLGVVSRVSSGV 125
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 459 PGAGQLDKPPVFTRDGKSGLSSTKRATPI 545
P A Q+ PPV T++ S + KR TPI
Sbjct: 474 PVAVQVTAPPVSTKNSASSKPTKKRITPI 502
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,478,047
Number of Sequences: 37544
Number of extensions: 439512
Number of successful extensions: 1760
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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