Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30292
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 31 0.58
SB_12131| Best HMM Match : Herpes_US12 (HMM E-Value=2.3) 31 0.58
SB_12782| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 29 3.1
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 29 4.1
SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_5004| Best HMM Match : AA_kinase (HMM E-Value=0) 28 5.4
SB_49503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_58956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 28 7.1
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 27 9.4
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 27 9.4
SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13) 27 9.4
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 27 9.4
>SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 50.8 bits (116), Expect = 9e-07
Identities = 18/40 (45%), Positives = 32/40 (80%)
Frame = +2
Query: 506 QKWLIEYQKGNSNLVVENADMNNVVYMFRCRDSALTVRGK 625
+KW++E+Q+GN NL +E + M+ VVY++ C+DS + ++GK
Sbjct: 239 KKWMVEHQEGNKNLTIEGS-MSQVVYIYSCKDSVVIIKGK 277
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 339 LTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLP---QPGAGQLDKPPVFTRDGK 509
+ S LRKVT D +THKNP LR A+S KP P + KPPVF GK
Sbjct: 187 IASGLRKVTDDQKTHKNPNLR-------ASSVVKDKPKPTIAKKPVAVTKKPPVFELQGK 239
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 312 LRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPP 488
L +QS TS L+ TP+ + PT + PAP K+T A + +P+P PP
Sbjct: 270 LSPSQSDADNTSPLKASTPEDKGTNKPTTEEKPAPAKSTWADLFRGVPKPTPPVAALPP 328
>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
Length = 712
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 363 TPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPP 488
T D H PTL P A H L +P LDKPP
Sbjct: 253 TLDKPPHSPPTLTLDKPPHSALDKPPHSALDKPPHSALDKPP 294
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 369 DMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKPP 488
D H PTL P A H L +P LDKPP
Sbjct: 147 DKPPHLPPTLTLDKPPHSALDKPPHSALDKPPHLTLDKPP 186
>SB_12131| Best HMM Match : Herpes_US12 (HMM E-Value=2.3)
Length = 209
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 397 SVKAQRRSKRRRPPDTSRCHSPAPDN*TSRPSSLGTAKVAYRVPKGQLQFGGRERGHEQR 576
S+KA+ +T+ HSP + S + T + + P+GQ + G RGH R
Sbjct: 73 SLKAESGKAEHPDEETAAVHSPEIRHTLDHHSKIPTHRATAQSPRGQTKVGVSPRGHLHR 132
>SB_12782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 312 LRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGP 410
LRR ++RRT T +L D +++ P+ QGP
Sbjct: 31 LRRKENRRTRTKTLGAQNRDRESNPEPSATQGP 63
>SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 300 PQRSLRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGH 443
P +S + +Q+ + + + + D QT K+P LR+ P T AA H
Sbjct: 31 PTKSSKAHQTLKKIEQAKSSTSKDWQT-KSPHLREATMPDSPTDAAAH 77
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 409 QRRSKRRRPPDTSRCHSPAPDN 474
Q +PP TSR SP+PDN
Sbjct: 563 QNEENNTKPPKTSRTSSPSPDN 584
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 366 PDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKP 485
P + T PT Q PAP A + A P P P Q P
Sbjct: 708 PTLSTAAQPTQAQNPAPTPAPTQA-QNPAPTPAPTQAQNP 746
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 367 RTCRPTRIRLSVKAQRRSKRRRPPDTSRCHSPAPDN*TSRPSSLGTA 507
+TC T + S+K + + ++ P+TS SP TSR +S T+
Sbjct: 190 KTCPKTSLETSMKTRLNTSQKTSPETSPEISPKTGRKTSRKTSRKTS 236
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +1
Query: 364 RRTCRPTRIRLSVKAQRRSKRRR---PPDTSRCHSPAPDN*TSRPSSLGTAKVAYRVPKG 534
R + +R R + + Q+RS+ RR PP R S + S+ T K R P+G
Sbjct: 249 RSRSKHSRSRSNSRDQKRSRSRRSHTPPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRG 308
Query: 535 QLQFGGRERGHEQRCVHVPLSRLR 606
Q RER +++ L R R
Sbjct: 309 Q---SSRERNTKRKSKSPSLERRR 329
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 557 SRPPNWSCPFGTR*ATFAVPSEDG 486
++P NW FGTR T+ VP + G
Sbjct: 169 TQPENWGENFGTRIRTYFVPQQSG 192
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 121 PRLGPTAVRFASVRQTVSHNRTCVVWQGQCWXXPTASPGRTSPSAPV 261
PRL PT ASV + V QG ++ P TSP +PV
Sbjct: 1062 PRLNPTPTYLASVNRVPEFKHAAVKTQGS----TSSEPDVTSPGSPV 1104
>SB_26007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1145
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 68 NRVLKDWKEKDKTHVEWCRAWVQLLSDLQAYVKQF-HTTGL-VWSGK 202
+++LK WK+ +KT + W + +++ + +K F HT L +W K
Sbjct: 112 SKILKTWKDGNKTWIAWTHSHTLVITQ-EILLKMFNHTLELKIWDMK 157
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 315 RRNQSRRTLTSSLRKVTPDMQTHKNP-TLRQGPAPFKATSAA 437
R +Q + L S L + TPD + K P T R+ P KATS +
Sbjct: 333 RSDQYIKDLNSRLDRRTPDTERKKTPDTARRVPLTAKATSTS 374
>SB_28618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 342 TSSLRKVTP-DMQTHKNPTLRQGPAPFKATSAAGHKPLPQP 461
T S+ +T D+Q H+ PT + P A H P+PQP
Sbjct: 10 TISISDLTELDLQPHQTPTALENSNP-SPLIPASHHPIPQP 49
>SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 379 PTRIRLSVKAQRRSKRRRPPDTSRCHSPAPDN*TS-RPSSLGTAKVAYRVPKGQLQFGGR 555
P RL + A R PP +++ P P T+ +P KV + + +G L+
Sbjct: 1121 PLNFRLEIPAPFRLVCTEPPPSAKSSRPVPGGLTTVKPGKNIEVKVGFCLTRGLLELASS 1180
Query: 556 --ERGHE 570
E GH+
Sbjct: 1181 VDESGHD 1187
>SB_5004| Best HMM Match : AA_kinase (HMM E-Value=0)
Length = 835
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 481 SRPSSL-GTAKVAYRVPKGQLQFGGRERGHEQRCVH 585
SRP +L A +A G L GG+E H +C+H
Sbjct: 458 SRPDALVQVASLAISTANGLLLKGGKEAYHSNKCLH 493
>SB_49503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 160 RQTVSHNRTCVVWQGQCWXXPTASPGRTSPSAPVLPD 270
R + NRT V QG CW + + G S +L D
Sbjct: 4 RNYIGDNRTLAVQQGICWTIASTNVGPISEQQGILFD 40
>SB_58956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 321 NQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQL-DKPP 488
+QS T SS+ + P+++ + P A S +P+P+ G+L DK P
Sbjct: 137 SQSTTTTDSSMESILPEVEVQVSVAQPLLSEPQLAESVIEERPIPEDEDGELRDKEP 193
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +1
Query: 160 RQTVSHNRTCVVWQGQCWXXPTASPGRTSPSAPVLPDVDF 279
R + NRT V QG CW + + G S + DF
Sbjct: 278 RNYIGDNRTLAVQQGICWTIASTNVGPISEQQGIFLPSDF 317
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 496 VKTGGLSSCPAPGCGSGLCPAADVALNGAGP*RRVGFLWVC 374
+K LSS GC CP ++A+ G P R FL C
Sbjct: 297 IKIESLSSLQVDGCTGLKCPPLNIAMKGVKPARE--FLEEC 335
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 306 RSLRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPG 464
RS RR R T TS R+ + HK + P +AT+ L PG
Sbjct: 348 RSPRRKHRRSTSTSPSRRYRSGKKGHKRRSRSASRVPVRATANNDGTRLKYPG 400
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 336 TLTSSLRKVTPDMQTHKNP--TLRQGPAPFKATSAAGHKPLPQPGAGQLDKPPVFTRDGK 509
TL ++L+ TP T P + P+P + KP+P P L P V
Sbjct: 805 TLIATLQSPTPQTTTVATPRTVISALPSPTVVPTVPPAKPVPTPVVSSLTTPLVSATVLN 864
Query: 510 SGLSSTKRATPI 545
+ + T+ AT +
Sbjct: 865 ASQAQTRVATSV 876
>SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1422
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 623 SRGPSGRSRDNGTCTQRCSC--PRSRPPNWSCP 531
S GP G SRD G+ +QR ++PP SCP
Sbjct: 1026 SEGPPGESRDQGSMSQRMYYFNESTKPP--SCP 1056
>SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13)
Length = 609
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +3
Query: 306 RSLRRNQSRRTLTSSLRKVTPDMQTHKNPTLRQGPAPFKATSAAGHKPLPQPGAGQLDKP 485
R+ +R + RR RK HK+ +LR A + + + P +G L
Sbjct: 159 RTKKRKKHRRCRKFQTRKKNMKNGAHKSSSLR---ARSRDVTRPPIRLENYPPSGDLRGI 215
Query: 486 PVFTRDGKSGLSSTKRATP 542
T DGKS S+ K +TP
Sbjct: 216 DKMTEDGKSLPSNAKESTP 234
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 496 VKTGGLSSCPAPGCGSGLCPAA 431
++ GG+ CP GCG GL PAA
Sbjct: 14 LQMGGVL-CPGRGCGMGLFPAA 34
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,195,932
Number of Sequences: 59808
Number of extensions: 448584
Number of successful extensions: 1580
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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