Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30292
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.37 
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   3.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.9  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 94  ERQDPRRVVPRLG-PTAVRFASVRQTVSHNRTCVV 195
           +++  R+ V R   P A+R AS  QTVS++  CVV
Sbjct: 796 DKETHRKSVQRAHRPGALRVASAFQTVSYDAACVV 830


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = +1

Query: 376 RPTRIRLSVKAQRRSKRRRPPDTSRCHSPAPDN*TSRPSSLGTAKVAYRVPK--GQLQFG 549
           RP R +    +   S+RR     S+ H    DN       + T K++ R  K   QL   
Sbjct: 509 RPAREKTEPASGASSRRRSKSFLSKSHRNGKDNAAFERGGITTVKMSGREGKETHQLSVI 568

Query: 550 GRERGHE 570
           G E+ ++
Sbjct: 569 GSEQSYQ 575


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 364 RRTCRPTRIRLSVKAQRRSKRRRPPDTSRCHSPAPDN*TSRPSSLGTAKVAYRVPKGQLQ 543
           RRT  PTR+  +  A    +RRR    +R     P    + P++  T  V +R  + +  
Sbjct: 474 RRTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRPRARRNPPAT--TRPVRHRPTRRKST 531

Query: 544 FGGR--ERGHEQR 576
             G+  ++G+++R
Sbjct: 532 KRGKKDDKGYDRR 544


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 614 PSGRSRDNGTCTQRCSCPRSR-PPNWSC 534
           P    +DNG C ++  CP+ + P N  C
Sbjct: 266 PEHLLKDNGACVRK--CPKGKMPQNSEC 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,727
Number of Sequences: 2352
Number of extensions: 14530
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)