Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30290
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    30   0.059
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   1.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   1.3  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 30.3 bits (65), Expect = 0.059
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -2

Query: 255 PSCTRLPSTALTSVPLSNSSFL-YFHVTSEYGLPINLQVILMF 130
           P+   LPS  L SVPLS++ ++  F++ +E+G     QV+ +F
Sbjct: 277 PTSGVLPSQLLKSVPLSSNDYVDNFNIFTEFGELTPAQVLTLF 319


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 270 ALLVLPSCTR--LPSTALTSVPLSNSSFLYFHVTSEYGLPINLQVILMFCPSTT 115
           A  ++P+ T    PS   TS+    ++    H  SE G P   Q I+   P+TT
Sbjct: 831 AATLIPTATTNVRPSFTTTSISNGATTLQQQHAGSEAGHPYRFQPIVPELPTTT 884


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 270 ALLVLPSCTR--LPSTALTSVPLSNSSFLYFHVTSEYGLPINLQVILMFCPSTT 115
           A  ++P+ T    PS   TS+    ++    H  SE G P   Q I+   P+TT
Sbjct: 830 AATLIPTATTNVRPSFTTTSISNGATTLQQQHAGSEAGHPYRFQPIVPELPTTT 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,498
Number of Sequences: 2352
Number of extensions: 7709
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)