Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30287
(485 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 121 8e-27
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 121 1e-26
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 100 2e-20
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 95 7e-19
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 89 4e-17
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 85 1e-15
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 82 6e-15
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 78 1e-13
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 73 3e-12
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 71 2e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 71 2e-11
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 70 2e-11
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 69 4e-11
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 69 4e-11
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 69 6e-11
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 69 7e-11
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 68 1e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 67 2e-10
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 66 3e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 66 4e-10
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 66 5e-10
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 66 5e-10
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 65 7e-10
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 65 9e-10
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 65 9e-10
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 64 1e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 64 1e-09
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 64 2e-09
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 64 2e-09
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 64 2e-09
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 64 2e-09
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 64 2e-09
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 63 3e-09
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 63 3e-09
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 63 3e-09
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 63 4e-09
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 63 4e-09
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 62 5e-09
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 62 5e-09
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 62 5e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 5e-09
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 62 5e-09
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 62 5e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 62 5e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 62 6e-09
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 62 6e-09
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 62 6e-09
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 62 9e-09
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 9e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 61 1e-08
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 61 1e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 61 1e-08
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 61 1e-08
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 61 1e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 61 1e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 1e-08
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 61 1e-08
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 61 1e-08
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 60 2e-08
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 2e-08
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 60 2e-08
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 60 2e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 3e-08
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 60 3e-08
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 60 3e-08
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 59 5e-08
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 59 5e-08
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 59 5e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 59 6e-08
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 59 6e-08
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 59 6e-08
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 59 6e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 59 6e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 6e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 59 6e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 58 8e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 58 8e-08
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 58 8e-08
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 58 8e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 58 8e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 58 8e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 58 1e-07
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 58 1e-07
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 58 1e-07
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 1e-07
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 58 1e-07
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 58 1e-07
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 58 1e-07
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 2e-07
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 57 2e-07
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 57 2e-07
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 57 2e-07
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 57 2e-07
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 57 2e-07
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 57 2e-07
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 57 2e-07
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 57 2e-07
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 57 2e-07
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 57 2e-07
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 57 2e-07
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 56 3e-07
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 56 3e-07
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 56 3e-07
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 56 3e-07
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 56 3e-07
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 56 4e-07
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 4e-07
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 56 4e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 56 4e-07
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 56 6e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 56 6e-07
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 56 6e-07
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 56 6e-07
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 56 6e-07
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 56 6e-07
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 56 6e-07
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 56 6e-07
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 56 6e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 6e-07
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 56 6e-07
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 7e-07
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 55 7e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 55 7e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 55 7e-07
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 55 7e-07
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 55 7e-07
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 55 7e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 55 7e-07
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 55 7e-07
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 55 1e-06
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 55 1e-06
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 55 1e-06
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 54 1e-06
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 1e-06
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 54 1e-06
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 54 1e-06
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 54 2e-06
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 54 2e-06
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 54 2e-06
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 2e-06
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 54 2e-06
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 54 2e-06
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 54 2e-06
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 54 2e-06
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 54 2e-06
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 54 2e-06
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 54 2e-06
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 54 2e-06
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 54 2e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 54 2e-06
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 54 2e-06
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 54 2e-06
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 53 3e-06
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 53 3e-06
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 53 3e-06
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 53 3e-06
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 53 3e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 53 3e-06
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 53 3e-06
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 53 3e-06
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 53 3e-06
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 53 3e-06
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 4e-06
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 4e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 4e-06
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 53 4e-06
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 53 4e-06
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 53 4e-06
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 53 4e-06
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 53 4e-06
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 5e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 52 5e-06
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 52 5e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 52 5e-06
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 7e-06
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 52 7e-06
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 7e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 52 7e-06
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 52 7e-06
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 52 7e-06
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 52 7e-06
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 52 7e-06
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 52 9e-06
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 52 9e-06
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 52 9e-06
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 52 9e-06
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 52 9e-06
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 52 9e-06
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 52 9e-06
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 52 9e-06
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 52 9e-06
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 51 1e-05
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 1e-05
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 51 1e-05
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 51 1e-05
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 51 1e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 51 1e-05
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 51 1e-05
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 51 1e-05
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 51 1e-05
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 51 2e-05
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 51 2e-05
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 51 2e-05
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 2e-05
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 51 2e-05
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 51 2e-05
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 51 2e-05
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 51 2e-05
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 51 2e-05
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 51 2e-05
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 51 2e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 51 2e-05
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 51 2e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 51 2e-05
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 50 2e-05
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 50 2e-05
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 50 2e-05
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 2e-05
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 50 3e-05
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 50 3e-05
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 50 3e-05
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 50 3e-05
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 50 3e-05
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 50 3e-05
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 50 3e-05
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 50 3e-05
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 50 3e-05
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 50 3e-05
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 50 3e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 50 3e-05
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 50 3e-05
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 50 4e-05
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 50 4e-05
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 50 4e-05
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 50 4e-05
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 50 4e-05
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 50 4e-05
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 50 4e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 50 4e-05
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 49 5e-05
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 49 5e-05
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 49 5e-05
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 49 5e-05
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 5e-05
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 49 5e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 49 5e-05
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 49 5e-05
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 49 5e-05
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 49 5e-05
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 49 5e-05
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 49 6e-05
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 49 6e-05
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 49 6e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 49 6e-05
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 49 6e-05
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 49 6e-05
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 49 6e-05
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 49 6e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 49 6e-05
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 49 6e-05
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 49 6e-05
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 49 6e-05
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 49 6e-05
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 48 9e-05
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 48 9e-05
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 48 9e-05
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 48 9e-05
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 9e-05
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 48 1e-04
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 1e-04
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 48 1e-04
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 48 1e-04
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 48 1e-04
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 48 1e-04
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 48 1e-04
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 48 1e-04
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 48 1e-04
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 48 1e-04
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 48 1e-04
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 48 1e-04
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 48 1e-04
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 48 1e-04
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 1e-04
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 48 1e-04
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 48 1e-04
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 48 1e-04
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 48 1e-04
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 48 1e-04
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 48 1e-04
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 48 1e-04
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 48 1e-04
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 48 1e-04
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 48 1e-04
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 47 2e-04
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 47 2e-04
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 47 2e-04
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 47 2e-04
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 47 2e-04
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 47 2e-04
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 47 2e-04
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 47 2e-04
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 47 2e-04
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 47 2e-04
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 47 2e-04
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 47 2e-04
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 2e-04
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 47 2e-04
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 47 2e-04
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 47 3e-04
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 47 3e-04
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 47 3e-04
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 47 3e-04
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 47 3e-04
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 47 3e-04
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 47 3e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 3e-04
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 46 3e-04
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 46 3e-04
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 46 3e-04
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 46 3e-04
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 3e-04
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 46 3e-04
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 46 3e-04
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 46 3e-04
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 46 3e-04
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 46 3e-04
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 46 3e-04
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 46 5e-04
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 46 5e-04
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 46 5e-04
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 46 5e-04
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 46 5e-04
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 46 5e-04
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 46 5e-04
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 5e-04
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 46 5e-04
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 46 5e-04
UniRef50_Q8IL21 Cluster: RNA helicase, putative; n=2; Plasmodium... 46 5e-04
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 46 5e-04
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 5e-04
UniRef50_A7ANF1 Cluster: DEAD/DEAH box domain containing protein... 46 5e-04
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 46 5e-04
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 46 5e-04
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 46 5e-04
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 46 5e-04
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 46 6e-04
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 6e-04
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 46 6e-04
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 46 6e-04
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 46 6e-04
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 46 6e-04
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 46 6e-04
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 6e-04
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 6e-04
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 46 6e-04
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 46 6e-04
UniRef50_Q6C2D3 Cluster: Yarrowia lipolytica chromosome F of str... 46 6e-04
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 46 6e-04
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 46 6e-04
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 45 8e-04
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 45 8e-04
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 45 8e-04
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 45 8e-04
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 45 8e-04
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 45 8e-04
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 45 8e-04
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 45 8e-04
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 45 8e-04
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 45 8e-04
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 45 8e-04
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 45 8e-04
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 45 8e-04
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 45 8e-04
UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116, mito... 45 8e-04
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 45 8e-04
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 45 8e-04
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 45 8e-04
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 45 0.001
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 45 0.001
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 45 0.001
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 45 0.001
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 45 0.001
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 45 0.001
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.001
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 45 0.001
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 45 0.001
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 45 0.001
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 45 0.001
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 45 0.001
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 45 0.001
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 45 0.001
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 45 0.001
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 44 0.001
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 44 0.001
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 44 0.001
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 44 0.001
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.001
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.001
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 44 0.001
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 44 0.001
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 44 0.001
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.001
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 44 0.001
UniRef50_A7AV91 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 44 0.001
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.001
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 44 0.001
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 44 0.001
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.001
UniRef50_P34640 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.001
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 44 0.002
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 44 0.002
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 44 0.002
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 44 0.002
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.002
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 44 0.002
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 44 0.002
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 44 0.002
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 44 0.002
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.002
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 44 0.002
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 44 0.002
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 44 0.002
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 44 0.002
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 44 0.002
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.002
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 44 0.002
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 44 0.002
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 44 0.002
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 44 0.002
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 44 0.002
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 44 0.002
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 44 0.002
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 43 0.003
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 43 0.003
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 43 0.003
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 43 0.003
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 43 0.003
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 43 0.003
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 43 0.003
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 43 0.003
UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1; Plasmo... 33 0.004
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 43 0.004
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 43 0.004
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 43 0.004
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 43 0.004
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.004
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 43 0.004
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 43 0.004
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 43 0.004
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 43 0.004
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 43 0.004
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 43 0.004
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 43 0.004
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 42 0.006
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 42 0.006
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 42 0.006
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 42 0.006
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 42 0.006
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.006
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 42 0.006
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 42 0.006
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 42 0.006
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 42 0.006
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 42 0.007
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.007
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 42 0.007
UniRef50_A2E7Z7 Cluster: Helicase conserved C-terminal domain co... 42 0.007
UniRef50_A2E773 Cluster: Helicase conserved C-terminal domain co... 42 0.007
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 42 0.007
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 121 bits (292), Expect = 8e-27
Identities = 55/76 (72%), Positives = 68/76 (89%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATF+ISILQQ++ +E QAL+L PTRELAQQIQKV++ALGD++ A C
Sbjct: 73 VIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATC 132
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTNVR ++++L
Sbjct: 133 HACIGGTNVRNEMQKL 148
Score = 98.3 bits (234), Expect = 8e-20
Identities = 44/69 (63%), Positives = 56/69 (81%), Gaps = 2/69 (2%)
Frame = +2
Query: 50 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 223
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 224 RXIMPCIQG 250
R I+PCI+G
Sbjct: 62 RAIIPCIKG 70
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 121 bits (291), Expect = 1e-26
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQ+QSGTGKTATFSIS+LQ +D +RE QALIL PTRELA QIQK ++ALGD++N +C
Sbjct: 78 VIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQC 137
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTNV EDIR+L
Sbjct: 138 HACIGGTNVGEDIRKL 153
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
V TFD M L+E+LLRGIYAYGFEKPSAIQQR I I+GR
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGR 76
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 100 bits (239), Expect = 2e-20
Identities = 43/58 (74%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQR I+PCI+G
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKG 67
Score = 76.6 bits (180), Expect = 3e-13
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKV 399
VIAQAQSGTGKTATF ISILQ+IDTS++E QALIL PTRELAQQ K+
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 95.1 bits (226), Expect = 7e-19
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIM 235
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQR I+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 236 PCIQG 250
PCI+G
Sbjct: 68 PCIKG 72
Score = 70.1 bits (164), Expect = 2e-11
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQ 387
VIAQAQSGTGKTATF+ISILQQ++ +E QAL+L PTRELAQQ
Sbjct: 75 VIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 89.4 bits (212), Expect = 4e-17
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI QAQSGTGKTATF ILQQ++ + +CQAL+L PTRELAQQI+KV+ ALGDHLN K
Sbjct: 52 VIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKI 111
Query: 436 H 438
+
Sbjct: 112 Y 112
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 149 DMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
D N+ L + G EKPSAIQQ+ I+P +G
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKG 49
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 84.6 bits (200), Expect = 1e-15
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+AQAQSGTGKT TF+I LQ+ID + R+ Q +IL P RELA+QI VV +G +LN +
Sbjct: 96 VLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNIEA 155
Query: 436 HACIGGTNVRE 468
CIGGT+ +E
Sbjct: 156 FCCIGGTSTQE 166
Score = 64.9 bits (151), Expect = 9e-10
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +2
Query: 110 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+ I P I G+
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGK 94
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 82.2 bits (194), Expect = 6e-15
Identities = 37/61 (60%), Positives = 49/61 (80%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKT+ F++++ Q +DTS RE QALI PTRELA Q +KV++A+GD +N +
Sbjct: 316 VIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQA 375
Query: 436 H 438
H
Sbjct: 376 H 376
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Frame = +2
Query: 116 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR-VLSLKPS--QELE 286
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQR ++P IQG V++ S +
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 287 KLLLSLYRFY---NKSIQAFVN 343
L++Y+ N+ +QA ++
Sbjct: 329 MFALTVYQMVDTSNREVQALIS 350
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 77.8 bits (183), Expect = 1e-13
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++A+A++GTGKTA F I L+++ + + QALI+ PTRELA Q +VV LG H C
Sbjct: 86 ILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISC 145
Query: 436 HACIGGTNVREDIRQL 483
GGTN+R+DI +L
Sbjct: 146 MVTTGGTNLRDDILRL 161
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/38 (57%), Positives = 25/38 (65%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
TF+D LK ELL GI+ GFEKPS IQ+ I I GR
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGR 84
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 72.9 bits (171), Expect = 3e-12
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+ N +
Sbjct: 76 ILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQ 135
Query: 433 CHACIGGTNVREDIRQL 483
GGT +R+DI +L
Sbjct: 136 VMITTGGTTLRDDILRL 152
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/62 (41%), Positives = 33/62 (53%)
Frame = +2
Query: 68 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQ 247
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++ I +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 248 GR 253
GR
Sbjct: 73 GR 74
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++A+A++GTGK+ + I +L++ID QAL+L PTRELA Q+ ++ I + HL K
Sbjct: 129 ILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVK 188
Query: 433 CHACIGGTNVREDIRQL 483
A GGTN+R+DI +L
Sbjct: 189 VMATTGGTNLRDDIMRL 205
Score = 40.7 bits (91), Expect = 0.017
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D LK ELL GI+ G+EKPS IQ+ I + GR
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGR 127
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI QAQ+GTGKTA F + I++++ R QAL+L PTRELA Q+ + + +G H K
Sbjct: 46 VIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKT 105
Query: 436 HACIGGTNVREDIRQL 483
A GG ++ IR L
Sbjct: 106 IAIYGGQSIERQIRSL 121
Score = 35.9 bits (79), Expect = 0.49
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
TF D+ L E++L+ + GFE+PS IQ + I +QG+
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGK 44
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 70.1 bits (164), Expect = 2e-11
Identities = 39/56 (69%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQ-IQKVVIALGDHL 423
IAQAQSGTGKTATFSI+ LQ IDTS QALIL PTRELAQQ I ++ LG +L
Sbjct: 75 IAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGVNL 130
Score = 35.1 bits (77), Expect = 0.85
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 176 RGIYAYGFEKPSAIQQRXIMPCIQGR 253
+ + +YGFEKPS IQQ I+P I+G+
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGK 72
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 391 QKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
+KV++ LG+ L +AC GGT+ +ED ++L
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRL 216
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 69.3 bits (162), Expect = 4e-11
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIA 408
VIAQ+QSGTGKTAT+ I+ LQ+ID + QA+IL PTRELA QIQKVV++
Sbjct: 61 VIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 62.9 bits (146), Expect = 4e-09
Identities = 27/39 (69%), Positives = 34/39 (87%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
V++F+ M L E LLRGI+AYGFEKPSAIQQ+ I+PCI+G
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKG 58
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 69.3 bits (162), Expect = 4e-11
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQ+QSGTGKTATFS+S+LQ +D Q L+ ALGD++N +C
Sbjct: 78 VIAQSQSGTGKTATFSVSVLQCLDI-----QGLL----------------ALGDYMNVQC 116
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTNV EDIR+L
Sbjct: 117 HACIGGTNVGEDIRKL 132
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
V TFD M L+E+LLRGIYAYGFEKPSAIQQR I I+GR
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGR 76
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 68.9 bits (161), Expect = 6e-11
Identities = 30/77 (38%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++A+A++GTGK+ + I +L+++D QA+++ PTRELA Q+ ++ I + H+ AK
Sbjct: 121 ILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAK 180
Query: 433 CHACIGGTNVREDIRQL 483
A GGTN+R+D+ +L
Sbjct: 181 VMATTGGTNLRDDVMRL 197
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D LK ELL GI+ G+E PS+IQ+ I + GR
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGR 119
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 68.5 bits (160), Expect = 7e-11
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L+ V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PTREL QQ+ K +
Sbjct: 36 LNSTKNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSR 95
Query: 418 HL-NAKCHACIGGTNVREDIRQL 483
++ A GG + E I++L
Sbjct: 96 YIVRIHTEAVYGGKKIEEQIKKL 118
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +1
Query: 271 QSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCHACIG 450
QS G T T ILQ++D + ECQAL+L PT +LA + Q V+ LG L+AK HA G
Sbjct: 91 QSLFGTTVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCG 150
Query: 451 GTNVRED 471
GT+ ED
Sbjct: 151 GTSAHED 157
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QAQ+GTGKTA F I IL+ ID S R QALIL PTRELA Q+ + + ++
Sbjct: 43 IVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNV 102
Query: 436 HACIGGTNVREDIRQL 483
GG ++ IR+L
Sbjct: 103 FPVYGGQSIDRQIREL 118
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+E+F ++ L +E+L + GF P+ IQ++ I I+G+
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGK 40
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
VI QAQ+GTGKTA F + +LQ+ID + R QAL+L PTRELA Q+ + AL HL
Sbjct: 45 VIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHL 100
Score = 39.1 bits (87), Expect = 0.052
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
VE+F D+ L+EELL+ I GF +PS IQ I ++GR
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGR 43
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
V+ AQ+GTGKTA F++ IL ID +R QAL+L PTRELAQQ+ + + G + +
Sbjct: 49 VVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLR 108
Query: 433 CHACIGGTNVREDIRQL 483
+ GG ++R+ ++ L
Sbjct: 109 ILSIFGGADMRQQLKSL 125
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 65.7 bits (153), Expect = 5e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
VIAQAQSGTGKT FSI +L +ID S + QAL+L PTRELA QI V +G +
Sbjct: 133 VIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 74 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQ 220
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQ 118
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 65.7 bits (153), Expect = 5e-10
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I QAQ+GTGKTA F + +L ++DT Q +++ PTRELA Q+ + + +G H +
Sbjct: 42 IIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRI 101
Query: 436 HACIGGTNVREDIRQL 483
GG ++ IR L
Sbjct: 102 LPIYGGQDINRQIRAL 117
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 65.3 bits (152), Expect = 7e-10
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAKC 435
I AQ+GTGKTA F + +L ID + RE QALIL PTRELAQQI + + HL
Sbjct: 55 IGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNV 114
Query: 436 HACIGGTNVREDIRQL 483
GG N+ IR +
Sbjct: 115 VPVFGGANIMNQIRDI 130
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 64.9 bits (151), Expect = 9e-10
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I QAQ+GTGKTA F+I IL +D SI Q L++ PTRELA QI + LG + +K
Sbjct: 41 IIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKI 100
Query: 436 HACIGGTN 459
+GG +
Sbjct: 101 ALILGGVS 108
Score = 35.1 bits (77), Expect = 0.85
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F MN+K E+L+ + GFEKP+ IQ+ + +G+
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGK 39
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 64.9 bits (151), Expect = 9e-10
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
+ P + +IAQAQSGTGKTA F +++L +ID ++ Q + L PT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 418 HL-NAKCHACIGGTNV 462
+ N K H I G N+
Sbjct: 714 FIDNLKIHYAIKGGNM 729
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 64.5 bits (150), Expect = 1e-09
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
P +I QA+SGTGKT FS+ L+ ID + Q LIL PTRE+A QIQ + A+G +
Sbjct: 2 PVQDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEM 61
Query: 424 NA-KCHACIGGTNVREDIRQL 483
+ H IGGT D ++L
Sbjct: 62 EGLRSHVFIGGTLFGPDRQKL 82
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 64.5 bits (150), Expect = 1e-09
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT--SIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
VI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PTRELA Q+ L +
Sbjct: 84 VIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPT 143
Query: 430 KCHACIGGTNVREDIRQL 483
+ GG N+ +RQL
Sbjct: 144 EIAVLSGGKNMNRQLRQL 161
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L + VI QAQ+GTGKTA F I +++++D + QAL+L PTRELA Q+ + +L
Sbjct: 37 LSGKNNVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKG 96
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ GG ++ IR L
Sbjct: 97 NKRLNLLPVYGGVSIGNQIRAL 118
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 64.1 bits (149), Expect = 2e-09
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++A AQ+GTGKTA F +LQ ID S + Q LI+ PTREL QI + H+ +
Sbjct: 42 MVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVR 101
Query: 433 CHACIGGTNVREDIRQL 483
A GG+N++E R++
Sbjct: 102 VVAVYGGSNIQEQAREI 118
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
TFD + L LL+ I GFE PS IQ+ I
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTREL Q+ + + +G ++ K
Sbjct: 44 VVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKV 102
Query: 436 HACIGGTNVREDIRQL 483
A GG ++ I QL
Sbjct: 103 LAVYGGQSIGNQIAQL 118
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 63.7 bits (148), Expect = 2e-09
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+I +A+SGTGKTA F I L+ ID I Q +IL PTRE+A QI++V+ +LG + K
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 433 CHACIGGTNVREDIRQL 483
+ IGG + D ++L
Sbjct: 124 VESFIGGVAMDIDRKKL 140
Score = 33.5 bits (73), Expect = 2.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
TF M L +++L G+ GF KPS IQ + I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ Q TGKT S+S+L D S+++ Q LIL TR+L ++ +++ALG LN
Sbjct: 62 VVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSI 121
Query: 436 HACIGGTNVREDI 474
HAC G ++++DI
Sbjct: 122 HACSEGNSIQDDI 134
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR---VLSLKPSQELEKLLLS 301
+ TF+ M L++ELLRGI A+GF +P +QQR ++P IQGR + + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 302 LYRFYNKSIQ 331
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI QAQ+GTGKTA F I ++++I+ QA+++ PTRELA Q+ + + +G AK
Sbjct: 43 VIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKV 102
Query: 436 HACIGGTNVREDIRQL 483
GG ++ IR L
Sbjct: 103 LPIYGGQDIGRQIRAL 118
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 63.7 bits (148), Expect = 2e-09
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ A++G+GKTA F+I ILQ + T+ + AL+L PTRELA QI++ ALG + +
Sbjct: 138 IVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLRS 197
Query: 436 HACIGGTNVREDIRQL 483
IGG ++ E R L
Sbjct: 198 VCIIGGMSMMEQARDL 213
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+I QA+SGTGKT FS L + Q LIL PTRE+A QI V+ A+G + +
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 433 CHACIGGTNVREDIRQL 483
CH IGGT + +D +L
Sbjct: 163 CHVFIGGTPLSQDKTRL 179
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 63.3 bits (147), Expect = 3e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD-HL 423
RT +I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++ PTRELAQQ+ L
Sbjct: 41 RTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKA 100
Query: 424 NAKCHACIGGTNVRED 471
IGGT++ +D
Sbjct: 101 GVSVKVFIGGTDIEKD 116
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 63.3 bits (147), Expect = 3e-09
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+I QA+SGTGKT FS L + Q LIL PTRE+A QI V+ A+G + +
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 433 CHACIGGTNVREDIRQL 483
CH IGGT + +D +L
Sbjct: 162 CHVFIGGTPLSQDKTRL 178
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+I +++SGTGKT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N K
Sbjct: 64 LIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLK 123
Query: 433 CHACIGGTNVREDIRQ 480
+ IGG + +D+++
Sbjct: 124 IESFIGGRPLEDDLKK 139
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 62.9 bits (146), Expect = 4e-09
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L+ + ++A A++GTGKTA F + +LQ ID + QA+IL PTREL QQI +I+ +
Sbjct: 38 LNDKEDIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAE 97
Query: 418 HLNAKCHACI-GGTNVREDIRQL 483
H + A + GG ++ I +L
Sbjct: 98 HTSQVSIATLCGGIPIKPQIERL 120
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 62.5 bits (145), Expect = 5e-09
Identities = 33/76 (43%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI QAQ+GTGKTA F I +++++ T R QALIL PTRELA Q+ + L H +
Sbjct: 46 VIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRT 104
Query: 436 HACIGGTNVREDIRQL 483
GG ++ I+ L
Sbjct: 105 LPIYGGQSIVHQIKAL 120
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 62.5 bits (145), Expect = 5e-09
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH--LNA 429
VI Q+ +G+GKT + + I Q+IDTS RE QA+IL PT ELA QI K + L + ++
Sbjct: 43 VIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSV 102
Query: 430 KCHACIGGTNVREDIRQL 483
IG NV+ I +L
Sbjct: 103 TSTPIIGNANVKRQIEKL 120
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCH 438
I A +GTGKTA F I +++ ID+++++ QAL+L PTRELA Q+ + + LG +
Sbjct: 86 IGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVV 145
Query: 439 ACIGGTNVREDI 474
GG + R I
Sbjct: 146 TIYGGASYRTQI 157
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH-LNAK 432
V+ AQ+GTGKTA F++ +L + +RE Q L+L PTRELAQQ+ V + H N K
Sbjct: 46 VLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVK 105
Query: 433 CHACIGGTNVREDIRQL 483
+ GG++ R L
Sbjct: 106 VASIYGGSDFGSQFRAL 122
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC
Sbjct: 129 ILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 436 HACIGGTNVREDIRQL 483
+GG ++ R+L
Sbjct: 189 SVIVGGRSLIHQAREL 204
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 62.5 bits (145), Expect = 5e-09
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+I QA+SGTGKT F+ L + Q L+L PTRE+A QI VV+A+G + +
Sbjct: 66 LIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLE 125
Query: 433 CHACIGGTNVREDIRQL 483
CH IGG + +D + L
Sbjct: 126 CHVFIGGRPISQDKQHL 142
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +1
Query: 241 HPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
+P +I Q+QSGTGKTA F++++L ++D +I QA+ + P+RELA+QIQ+V+ +G
Sbjct: 185 NPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQF 244
Query: 421 LNAKCHACIGGT 456
I G+
Sbjct: 245 TQVGTFLAIPGS 256
Score = 41.9 bits (94), Expect = 0.007
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
V++F ++NL E+L++GI A GF+KPS IQ++ +
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 62.1 bits (144), Expect = 6e-09
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG-DHLNAK 432
V+ +AQ+GTGKTA F + L +IDTSI++ Q ++L PTRELA Q+ + + + G D +
Sbjct: 55 VLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLR 114
Query: 433 CHACIGGTNVREDIRQL 483
GG + +QL
Sbjct: 115 VATLYGGQSYGPQFQQL 131
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 62.1 bits (144), Expect = 6e-09
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
T +IAQA++G+GKTATF++++L +++ ++ QAL + PTRELA Q +V+ LG
Sbjct: 138 TNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQI 197
Query: 430 KC 435
KC
Sbjct: 198 KC 199
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 62.1 bits (144), Expect = 6e-09
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
+IAQ+QSGTGKTATF +++L +ID + CQ L + PTREL QI +V I + +N
Sbjct: 90 LIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVLSL 265
V++F+D+ LK ELL GI + GF KPS+IQ+R + ++ + +L
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNL 90
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 61.7 bits (143), Expect = 9e-09
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +1
Query: 232 NALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL 411
NA+H + V+ QA++GTGKTA F +S+L Q+ + L+L TRELA QI+ L
Sbjct: 71 NAIHGKD-VLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRL 129
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
G N K A GG DI L
Sbjct: 130 GKFTNFKVKAVYGGVEESVDIHTL 153
Score = 39.5 bits (88), Expect = 0.039
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+F+D +LK++LLR + GFE+PS +Q + I I G+
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGK 76
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 61.7 bits (143), Expect = 9e-09
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
V+ QAQ+GTGKTA F++ +L ++D RE Q L+L PTRELAQQ+ + G + +
Sbjct: 49 VLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLE 108
Query: 433 CHACIGGTNVREDIRQL 483
+ GG RE + L
Sbjct: 109 VLSLCGGQEYREQLSGL 125
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 61.7 bits (143), Expect = 9e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI ++++GTGKTA F+I IL++I R AL++ PTRELA Q+ + AL H +
Sbjct: 60 VIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSV 119
Query: 436 HACIGGTNVREDIRQL 483
A GG ++ E +++L
Sbjct: 120 VAVYGGASMGEQLQKL 135
Score = 31.9 bits (69), Expect = 7.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+FD++ L E + R I +G+E+P+ +Q P G+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGK 58
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG K
Sbjct: 85 LIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKT 143
Query: 436 HACIGGTNVR 465
GG +++
Sbjct: 144 ICMYGGQSIK 153
Score = 34.3 bits (75), Expect = 1.5
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 68 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQ 247
Q S + P L + Q + FD LK+ +L+GI GF PS +Q + I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 248 GRVL 259
G+ L
Sbjct: 82 GKDL 85
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 61.3 bits (142), Expect = 1e-08
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKV 399
+IAQ+QSGTGKTATF +++L +I T + CQ L + PTRELA QI+ V
Sbjct: 118 MIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCI 244
V TF ++NLKE LL+GI A GF KPS IQ+R + I
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLI 111
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 60.9 bits (141), Expect = 1e-08
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKV 399
P R I+ + SGTG TATF+ISILQQID ++ +A L PTR LAQQIQKV
Sbjct: 177 PCLRYISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTRELA Q+ + + +
Sbjct: 43 VVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRT 102
Query: 436 HACIGGTNVREDIRQL 483
A GG ++ + QL
Sbjct: 103 LAIYGGQSIDRQMLQL 118
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 60.9 bits (141), Expect = 1e-08
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+ ++ +GTGKTA+F + IL++I+ + R QA+I+ PTRELA QI + G + N
Sbjct: 41 IFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLV 100
Query: 433 CHACIGGTNVREDIRQL 483
IGG ++R+ I++L
Sbjct: 101 IAPLIGGADMRDQIKRL 117
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA+A++GTGKTA F + ++Q++ + AL+L PTRELA Q+ + +L +
Sbjct: 87 IIAKARTGTGKTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRI 146
Query: 436 HACIGGTNVREDIRQL 483
H GG ++ E +R L
Sbjct: 147 HTVYGGVSIAEQLRNL 162
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 60.9 bits (141), Expect = 1e-08
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILXPTRELAQQIQKVVIALGDHLNAK 432
VI AQ+GTGKTA F + ILQ++ R +A+I+ PTRELA+QIQ V+ ALG + +
Sbjct: 41 VIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLR 100
Query: 433 CHACIGGTNVREDIRQL 483
GG + I++L
Sbjct: 101 SVTLYGGVGYQGQIQRL 117
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 60.9 bits (141), Expect = 1e-08
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH--LNA 429
+I Q+Q+G+GKT + + I Q+ID+S RE QALIL PT EL QI K + L + L
Sbjct: 43 IIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTI 102
Query: 430 KCHACIGGTNVREDIRQL 483
IG N+ I +L
Sbjct: 103 NSTVMIGEVNIVRQIEKL 120
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 60.9 bits (141), Expect = 1e-08
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL-GDHLNAK 432
+I Q++SGTGKT + I+++Q + +I + A+I+ PTRELA Q+Q L + K
Sbjct: 65 LIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFK 124
Query: 433 CHACIGGTNVREDIRQL 483
C A IGGT+V +D +++
Sbjct: 125 CSAFIGGTDVAKDRKRM 141
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 60.9 bits (141), Expect = 1e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI QAQ+GTGKTA F I I+++++ QAL++ PTRELA Q+ + + +G +
Sbjct: 42 VIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRV 101
Query: 436 HACIGGTNVREDIRQL 483
GG ++ IR L
Sbjct: 102 LPIYGGQDIERQIRAL 117
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
VIAQA +G+GKTA F + +LQ++D ++ QAL+L PTRELA Q+ K + L + N K
Sbjct: 66 VIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMK 125
Query: 433 CHACIGG 453
GG
Sbjct: 126 LVVLTGG 132
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QA +GTGKTA + + +LQ+I ++ Q LI+ PTRELA Q+ V LG +L +
Sbjct: 42 LVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRA 100
Query: 436 HACIGGTNVREDIRQL 483
A GG + IR L
Sbjct: 101 LAVYGGQAIERQIRGL 116
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI--QKVVIALGDHLNA 429
++ +Q+GTGKT + + I ++IDTS RE QALIL PT EL QI Q ++A L+
Sbjct: 42 LLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSV 101
Query: 430 KCHACIGGTNVREDIRQL 483
A IG N+++ I+ +
Sbjct: 102 TSLALIGEVNIQKQIKNI 119
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I AQ+G+GKTA F+I IL ++ A IL PTRELAQQI++ +LG + +
Sbjct: 121 IIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRS 180
Query: 436 HACIGGTNVREDIRQL 483
+GG N+ + R L
Sbjct: 181 TCIVGGMNMMDQARDL 196
Score = 37.1 bits (82), Expect = 0.21
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 113 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
+T+ D+ E+F ++NL EL++ + KP+ IQ + I P ++G
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEG 118
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 60.1 bits (139), Expect = 3e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 104 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
G +++DW+++V++FDDMNL E LL GIYAYGFEK CI+G
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIKG 58
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIA-LGDHLNAK 432
++ QAQ+GTGKTA F++ +L+++++ + Q L+L PTRELA Q+ A H + K
Sbjct: 111 LVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLK 170
Query: 433 CHACIGGTNVREDIRQL 483
A GGT+ R I L
Sbjct: 171 VLAVYGGTDFRSQISTL 187
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA A++G+GKTA+F+I IL Q+ A+IL PTRELA QI + A+G +N C
Sbjct: 44 IIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNC 103
Query: 436 HACIGG 453
IGG
Sbjct: 104 SVVIGG 109
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
V+A AQ+GTGKTA F + +LQQID R Q+LIL PTREL QI + +++ K
Sbjct: 43 VVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLK 102
Query: 433 CHACIGGTNVREDIRQL 483
GG+++ IR L
Sbjct: 103 VLPVYGGSSIDSQIRSL 119
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 59.7 bits (138), Expect = 3e-08
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+AQAQ+GTGKT F + IL++++ QALI+ PTRELA QI L +
Sbjct: 43 VMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINI 102
Query: 436 HACIGGTNVREDIRQL 483
A GG +V + +R+L
Sbjct: 103 LAAYGGQDVEQQLRKL 118
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 59.3 bits (137), Expect = 5e-08
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
L+ +IAQA +G+GKTATF++++L ++DT I Q + L PTRELA+Q Q VV LG
Sbjct: 147 LNSPMNLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQ 220
+ D+NL +LL+GIY GF +PS IQ
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQ 139
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ Q+Q+G+GKTATFSI L ++ + + + +I+ PTRELA Q + + +LG A
Sbjct: 60 IMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANT 115
Query: 436 HACIGGTNVREDIRQL 483
AC+GG ++ D++ L
Sbjct: 116 RACVGGNSLGADVKAL 131
Score = 40.3 bits (90), Expect = 0.023
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +2
Query: 128 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+V T++ M LK EL+ I G+EKPS IQQR I QG+
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGK 58
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 59.3 bits (137), Expect = 5e-08
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V QA++G+GKTA F + +LQQID S+ + QAL+L PTRELA Q+ + L L N K
Sbjct: 43 VRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK 102
Query: 433 CHACIGG 453
GG
Sbjct: 103 ILTLCGG 109
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 58.8 bits (136), Expect = 6e-08
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIREC--QALILXPTRELAQQIQKVVIALGDHLNA 429
+I QAQ+GTGKTA F +I+ D S ++ +ALIL PTRELA Q+ + ++ LG H
Sbjct: 44 IIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKL 103
Query: 430 KCHACIGGTNVREDIRQL 483
GG + IR L
Sbjct: 104 SVLPIYGGQPIDRQIRAL 121
Score = 39.5 bits (88), Expect = 0.039
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
FDD+ LKE LL+ I GFE+PS IQ I ++G
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEG 41
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 58.8 bits (136), Expect = 6e-08
Identities = 25/76 (32%), Positives = 48/76 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ ++++G+GKTA+F+I + + I+ QALI+ PTRELA Q++ + +G +C
Sbjct: 43 LVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRC 102
Query: 436 HACIGGTNVREDIRQL 483
A G ++++ I +L
Sbjct: 103 SAIFGKQSIKDQIAEL 118
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 265 QAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-KCHA 441
QAQ+GTGKTA F I ++ +D SI + Q+LIL PTRELA Q+ + L + A
Sbjct: 44 QAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLA 103
Query: 442 CIGGTNVREDIRQL 483
GG ++ IR L
Sbjct: 104 VYGGESIERQIRDL 117
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
++ AQ+GTGKTA F++ ++QQ I R +A+IL PTRELA QI + ++ G
Sbjct: 143 LVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKR 202
Query: 421 LNAKCHACIGGTNVREDIRQL 483
L IGG +R+ +R L
Sbjct: 203 LPLNFTHAIGGAPIRKQMRDL 223
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 58.8 bits (136), Expect = 6e-08
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PTRELA Q+ + + +
Sbjct: 43 IIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITT 102
Query: 436 HACIGGTNVREDIRQL 483
GG + + R L
Sbjct: 103 VTLYGGAPIMDQKRAL 118
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
T I AQ+GTGKTA F + +L ID + QALIL PTREL QQI+K + +++
Sbjct: 41 TDFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDD 100
Query: 430 K--CHACIGGTNVREDIRQL 483
+ A GG + + L
Sbjct: 101 RIFLEAVFGGEKIDRQMNNL 120
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 58.8 bits (136), Expect = 6e-08
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +1
Query: 241 HPRTRVIAQAQSGTGKTATFSISILQQID-TSIRECQALILXPTRELAQQIQKVVIALG 414
+P +IAQ+QSGTGKT F ++IL ++D + QAL L P+RELA+QIQ V+ ++G
Sbjct: 133 NPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 58.4 bits (135), Expect = 8e-08
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+I +A+SGTGKT F I L+ ID I Q LIL PTRE+A QI +V ++G + + K
Sbjct: 36 LIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLK 95
Query: 433 CHACIGGTNVREDIRQL 483
IGG + D +++
Sbjct: 96 VEVFIGGLAIENDKKKV 112
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 58.4 bits (135), Expect = 8e-08
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDTSIRECQ-----ALILXPTRELAQQIQKVVIALGDHLNAK 432
AQ+GTGKTA FS+ ILQ + R+ + LIL PTRELA QI + + A HLN K
Sbjct: 48 AQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMK 107
Query: 433 CHACIGGTNVREDIRQL 483
GG +R L
Sbjct: 108 HAVIFGGVGQNPQVRAL 124
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 58.4 bits (135), Expect = 8e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I ++++GTGKTA F + +L++I R +ALIL PTRELA Q+ + L H K
Sbjct: 69 LIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKHKGLKI 128
Query: 436 HACIGGTNVRE 468
A GG ++++
Sbjct: 129 AAIYGGASMKQ 139
Score = 36.3 bits (80), Expect = 0.37
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVLSLK 268
FDDMNL E + + G+ P+ +Q R P I+G+ L ++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVR 72
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 58.4 bits (135), Expect = 8e-08
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILXPTRELAQQIQKVVIALGDHLNA 429
++A AQ+GTGKT F + +Q + T R+ +ALIL PTRELA QI + ++ +
Sbjct: 42 IVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIARGTGI 101
Query: 430 KCHACIGGTNVREDIRQL 483
+ +GG N R +R +
Sbjct: 102 RAAVAVGGLNERSQLRDI 119
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 58.4 bits (135), Expect = 8e-08
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL- 423
R V+A+A++GTGKT +F I ILQ ++ + QAL+L TRELA Q KV L ++
Sbjct: 58 RRDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMP 117
Query: 424 --NAKCHACIGGTNVRED 471
+ IGG ++ ED
Sbjct: 118 DVTGRIMCAIGGVSIAED 135
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 58.4 bits (135), Expect = 8e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
+IAQ+QSGTGKTA F++ +L +D SI QA+ + PT+ELA Q +V+ +G N K
Sbjct: 111 LIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQ 247
V+TF+++ LK ELL+G+YA G+ KPS IQ+ + IQ
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQ 106
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 58.0 bits (134), Expect = 1e-07
Identities = 25/73 (34%), Positives = 47/73 (64%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QA +GTGKT F+I I++++ + +AL+L PTRELA Q+++ + L +
Sbjct: 40 ILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSS 99
Query: 436 HACIGGTNVREDI 474
+ GGT+V++++
Sbjct: 100 YVFYGGTSVKQNL 112
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+I QA++G+GKTA FS+ IL +I+ QALIL PTRELA Q+ + LG L K
Sbjct: 87 IIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLK 146
Query: 433 CHACIGGTNVRE 468
A GG + RE
Sbjct: 147 VLAMTGGQSGRE 158
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+ A +GTGKT F + +L +IDT+++ Q LIL P++ELA Q +V G+ + A
Sbjct: 33 IFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVGASV 92
Query: 436 HACIGGTNVR 465
+ IGG N R
Sbjct: 93 ASLIGGANGR 102
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PTRELA Q+ + + N
Sbjct: 45 VLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFH 104
Query: 433 CHACIGGTNVREDIRQL 483
GG ++R +R L
Sbjct: 105 VLPIYGGADMRNQLRAL 121
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L+ +T ++ AQ+GTGKTA F I ++Q DT ++ QAL+L PTREL Q+ + +G
Sbjct: 37 LNRQTDLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGR 96
Query: 418 HL-NAKCHACIGGTNVREDIRQL 483
++ K GG ++ +L
Sbjct: 97 YVQKLKIVPVYGGASIVSQTEEL 119
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 57.6 bits (133), Expect = 1e-07
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI----DTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
++A AQ+GTGKTA F++ +LQ++ T ++ ++LI+ PTRELA Q+ V L
Sbjct: 41 LLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQL 100
Query: 424 NAKCHACIGGTNVREDIRQL 483
N + A GG + I QL
Sbjct: 101 NIRSFAVYGGVRIEPQIAQL 120
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 57.6 bits (133), Expect = 1e-07
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA++ +GTGKT + I IL +ID + QA+IL P+ ELA QI + + N
Sbjct: 50 LIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKDNNISS 109
Query: 436 HACIGGTNVREDIRQL 483
IGG N++ I L
Sbjct: 110 EPLIGGANIKRQIENL 125
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 57.6 bits (133), Expect = 1e-07
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQA----LILXPTRELAQQIQKVVIALGDHL 423
V+AQA++GTGKT F + ++Q++ ++ A LIL PTRELAQQI +V + L
Sbjct: 107 VLAQAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAERMSTAL 166
Query: 424 NAK--CHACIGGTNVREDIRQL 483
+ K + +GGTN+ DI+ L
Sbjct: 167 SKKFGTRSVVGGTNMDRDIKNL 188
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI-QKVVIALGDHLNAK 432
+I QA++GTGKT F + IL++ID + QALI+ PTRELA QI ++ L +
Sbjct: 45 IIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDIN 104
Query: 433 CHACIGGTNVREDIRQL 483
A GG +V + +R+L
Sbjct: 105 VLAIYGGQDVAQQLRKL 121
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
+I QAQ+GTGKTA F + +L ID S + QAL+L PTRELAQQ+
Sbjct: 95 LIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQV 139
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
+F D NLK +L+ + GF +P+ IQ++ I + G
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAG 92
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QAQ+GTGKTA+F I IL ++ QAL+L PTRELA Q+ + + +L + +
Sbjct: 44 LMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMRIQV 102
Query: 436 HACIGGTNVREDIRQL 483
A GG ++ +R L
Sbjct: 103 LAIYGGQSIELQLRSL 118
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
E F M LK +LL+ I GFEKP+ IQ + I + G
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAG 41
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
P +IAQA +G+GKT F + +L ++D ++RE QAL + PTRELA Q +V+ +G
Sbjct: 130 PHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYA-YGFEKPSAIQ 220
F+D+NL EL++G+Y FEKPS IQ
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQ 119
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 57.2 bits (132), Expect = 2e-07
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
VI QA+SG GKTA F +S LQQI+ S + AL+L TRELA QI + +L + K
Sbjct: 86 VICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTK 145
Query: 433 CHACIGGTNVR 465
GG N++
Sbjct: 146 VSVFYGGVNIK 156
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
F D LK ELLR I GFE PS +Q I I G
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG 83
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ AQ+G+GKTA FS+ +LQ +D ++ Q L+L PTRELA Q+ + + H+
Sbjct: 46 VLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVN 105
Query: 433 CHACIGGTNVREDIRQL 483
A GG +R L
Sbjct: 106 VVALYGGQRYDVQLRAL 122
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
TF D+ LK +L + G+EKPS IQ I + GR
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR 44
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA +Q+G+GKTAT +I I +++T + + QALI+ PTRELA Q +G + K
Sbjct: 55 LIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKA 114
Query: 436 HACIGG 453
A GG
Sbjct: 115 FAIFGG 120
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 56.8 bits (131), Expect = 2e-07
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH-LNAKC 435
IA AQ+GTGKTA F++ ILQ + I QALIL PTRELA Q+ + L + N
Sbjct: 47 IALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTI 106
Query: 436 HACIGGTNVREDIRQL 483
GG ++QL
Sbjct: 107 AVLCGGQEYGRQLKQL 122
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 56.8 bits (131), Expect = 2e-07
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSI---RECQALILXPTRELAQQIQKVVIALGDHLN 426
V+ AQ+GTGKT F+ ILQ++ I R ++LIL PTRELA QIQ+ A G HL
Sbjct: 41 VLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLP 100
Query: 427 AKCHACIGGTNVREDIRQL 483
+ GG + + +L
Sbjct: 101 LRSAVIFGGVGQQPQVDKL 119
Score = 38.7 bits (86), Expect = 0.069
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
TF ++ L + +L+ + G+EKPS IQ++ I P + GR
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGR 39
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH-LNAK 432
++A AQ+GTGKTA F ++Q+ID + R QALIL PTREL QI + +
Sbjct: 43 LVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGIN 102
Query: 433 CHACIGGTNVREDIRQL 483
A GG ++ E R +
Sbjct: 103 VVAVYGGASITEQARDI 119
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
F+ + L E LLR I GFE P+ +Q++ I
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAI 33
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA A++G+GKTA F + ILQ++ + ALIL PTREL QI + ++A+G L
Sbjct: 91 IIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTV 150
Query: 436 HACIGG 453
+GG
Sbjct: 151 VTLVGG 156
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI AQ+G+GKTA F+I ILQ + + + A +L PTRELA QI + V ALG + +
Sbjct: 144 VIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRS 203
Query: 436 HACIGGTNV 462
+GG ++
Sbjct: 204 ATIVGGMDM 212
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-KC 435
+ +AQ+GTGKTA FS+ +L +++ S + QA+++ PTRELA Q+ + LG ++ K
Sbjct: 67 LGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKV 126
Query: 436 HACIGGTNVREDIRQL 483
GG ++ + +R L
Sbjct: 127 LEIYGGASILDQMRAL 142
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 56.4 bits (130), Expect = 3e-07
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILXPTRELAQQIQKVVIALGDH 420
V+A AQ+GTGKTA F++ +LQ++ S + L+L PTRELA+Q+ + IA G
Sbjct: 41 VMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKG 100
Query: 421 LNAKCHACIGGTNVREDIRQL 483
L+ + A GG ++ + +L
Sbjct: 101 LDLRFLAAYGGVSINPQMMKL 121
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
+I QAQ+GTGKTA F++ +L +ID + RE Q LIL PTRELA Q+
Sbjct: 63 MIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQV 107
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 56.4 bits (130), Expect = 3e-07
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILXPTRELAQQIQKVVIAL 411
AL +IAQAQ+GTGKTA F I +L++ID + +A+I+ PTRELA QI + + +L
Sbjct: 52 ALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSL 111
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
K GG ++ + + L
Sbjct: 112 KGTKRVKITTLYGGQSLEKQFKDL 135
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMP 238
E F+D L EE+L I G+EKP+ I Q+ ++P
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLP 50
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
++ Q++SGTGKT + ++ LQ S + + L++ PTRELA Q+ + LG+ L + K
Sbjct: 65 LLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFK 124
Query: 433 CHACIGGTNVREDIRQL 483
+ +GGT+V D +L
Sbjct: 125 VSSFMGGTDVTRDREKL 141
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILXPTRELAQQIQKVVIALGDHLNAK 432
+IA A++G+GKTA + + I+ +++T E ++LI+ PTRELA Q KV LG N K
Sbjct: 53 IIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLK 112
Query: 433 CHACIGGTNVREDIRQL 483
IGG+ + + L
Sbjct: 113 ASLIIGGSKLSDQFDNL 129
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 56.0 bits (129), Expect = 4e-07
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI----DTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
V+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V G HL
Sbjct: 45 VMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHL 104
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ K GG + + L
Sbjct: 105 SLKSTVVFGGVKINPQMMAL 124
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 56.0 bits (129), Expect = 4e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I Q+ SGTGKT + I Q+ SI Q LIL PTREL+ QI+ V L +
Sbjct: 50 IIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSI 109
Query: 436 HACIGGTNVREDIRQL 483
+C GG + ED++ L
Sbjct: 110 TSCHGGRWLGEDLKNL 125
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 241 HPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
+P +IAQ+QSGTGKTA FS+++L +++ QA+ L P+RELA+Q +VV +G
Sbjct: 129 NPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
++FD++ L ELL+GIYA F+KPS IQ+R +
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Frame = +1
Query: 265 QAQSGTGKTATFSISI----LQQIDTSIREC-QALILXPTRELAQQIQKVVIALGDHL-- 423
+AQ+G+GKT F + I ++Q+ T+ + C AL++ PTRELA+QI ++ + L HL
Sbjct: 52 EAQTGSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLEN 111
Query: 424 -NAKCHACIGGTNVREDIRQL 483
CIGG + + D+ +
Sbjct: 112 NQFSIQLCIGGVSTKIDVSNI 132
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 55.6 bits (128), Expect = 6e-07
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILXPTRELAQQIQKVVIALGDH 420
+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI PTRELA+QI + A +
Sbjct: 41 IFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKY 100
Query: 421 LNAKCHACIGGTNVREDIRQL 483
N A GG + R L
Sbjct: 101 TNLSVAAIFGGRKMSSQERML 121
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 55.6 bits (128), Expect = 6e-07
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA AQ+G+GKT F++S+L + E + LIL P+RE+AQQI KV + L +
Sbjct: 73 IIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELCAEMPVSV 131
Query: 436 HACIGGTNVREDIRQL 483
IGGT + QL
Sbjct: 132 CLAIGGTTGSKQANQL 147
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIA++ +GTGKT +++ +L++I + QA+IL P+REL QI +V+ +
Sbjct: 44 VIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSELRA 103
Query: 436 HACIGGTNVREDIRQL 483
+ IGG NV++ + +L
Sbjct: 104 ASLIGGANVKKQVEKL 119
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTS----IRECQALILXPTRELAQQIQKVVIALGDHL 423
++A+AQ+GTGKTA+F++ I++++ + R +AL+L PTRELA Q+ + G L
Sbjct: 44 LLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDL 103
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ + GG V I++L
Sbjct: 104 GMRVISVYGGVPVENQIKRL 123
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I A++G+GKTA F+I ILQ++ + +LIL PTREL+ QI++ +I+LG +
Sbjct: 81 IIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDV 140
Query: 436 HACIGGTNVREDIRQL 483
+GG ++ QL
Sbjct: 141 CLILGGLDMVSQALQL 156
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
+ VIA A++G+GKTATF+ ILQ + A++L RELA QI + G LN
Sbjct: 39 KQHVIANAETGSGKTATFAFPILQDLAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLN 98
Query: 427 AKCHACIGGTNVREDIRQL 483
+ +GG + + + +L
Sbjct: 99 LRVSTLVGGVDFNKQLSEL 117
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
V QAQ+GTGKTA F I +L+ ID+ QA+IL PTRELA Q+ + + L +L
Sbjct: 44 VTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYL 99
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I QA++GTGKTA F I +++ I + + Q L++ PTRELA Q+ + + +G +
Sbjct: 42 LIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRS 101
Query: 436 HACIGGTNVREDIRQL 483
A GG + R ++ L
Sbjct: 102 VAIYGGQDFRSQVKAL 117
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
P +IAQA +G+GKT F + +L ++D + + QA+ + PTRELAQQ + V++ +G
Sbjct: 139 PYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFT 198
Query: 424 NAKCHAC 444
C AC
Sbjct: 199 GITC-AC 204
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 55.6 bits (128), Expect = 6e-07
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
AL + V+ AQ+GTGKTA F+I +L +ID + + QAL+L PTRELA Q+ + G
Sbjct: 46 ALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYG 105
Query: 415 DHLN 426
+L+
Sbjct: 106 AYLS 109
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIREC--QALILXPTRELAQQIQKVVIALGDHLNA 429
++A AQ+GTGKTA F + I+Q + R ALIL PTRELAQQ+ + +H +
Sbjct: 47 LLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDL 106
Query: 430 KCHACIGGTNV 462
+ GGT++
Sbjct: 107 RIVCVYGGTSI 117
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 55.2 bits (127), Expect = 7e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVV 402
V+ +AQ+GTGKTA F + L +ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 48 VLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEAL 96
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 55.2 bits (127), Expect = 7e-07
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT ELA QI + V +L
Sbjct: 41 IIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVN 100
Query: 436 HACI-GGTNVREDIRQL 483
I GG++++ I L
Sbjct: 101 ATLICGGSHIQRQIYAL 117
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 55.2 bits (127), Expect = 7e-07
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI +A++GTGKT + + I+++ID S E QA+IL PT EL QI V+ L L K
Sbjct: 42 VIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKI 101
Query: 436 HA--CIGGTNVREDIRQL 483
+ +G N++ + +L
Sbjct: 102 TSTTLVGSGNIKRQMEKL 119
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 55.2 bits (127), Expect = 7e-07
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILXPTRELAQQIQKVVIALGDHLNAK 432
VI AQ+GTGKTA +++ I+Q++ ++ R + L++ PTRELA QI +LG +
Sbjct: 41 VIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIR 100
Query: 433 CHACIGGTNVREDIRQL 483
+ GG N+ + IR+L
Sbjct: 101 ECSIYGGVNMDQQIRRL 117
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 55.2 bits (127), Expect = 7e-07
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQID--TSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
V+ QA++GTGKTA F I I+++++ + R QALIL PTRELA Q++ + L
Sbjct: 44 VLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRI 103
Query: 430 KCHACIGGTNVREDIRQL 483
A GG +R + +L
Sbjct: 104 NVVAVYGGKPLRSQMEKL 121
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/84 (30%), Positives = 47/84 (55%)
Frame = +1
Query: 232 NALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL 411
+A+ ++ + +G+GKT F + I Q ++ ++ Q LIL P+REL QI++V +
Sbjct: 28 SAILKENNILLLSPTGSGKTLAFLLPIFQMMEEEVKGVQCLILVPSRELGLQIEQVWKKM 87
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
G H K + C GG ++ + + L
Sbjct: 88 GTHF--KVNTCYGGHSIETEFKNL 109
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L +IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTRELAQQ VV
Sbjct: 259 LDSNRNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCICPTRELAQQNYDVVGKFTK 318
Query: 418 HLNAK 432
+LN +
Sbjct: 319 YLNVR 323
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 55.2 bits (127), Expect = 7e-07
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L +IAQ+Q+G+GKT TF I++L +I+ ++ QA+ + PTREL+QQ VV
Sbjct: 195 LSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCICPTRELSQQNYDVVCNFTK 254
Query: 418 HLNAK 432
+LN K
Sbjct: 255 YLNVK 259
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI-QKVVIALGDHLNAK 432
VI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTREL Q+ +++ L + +
Sbjct: 43 VIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIR 102
Query: 433 CHACIGGTNVREDIRQL 483
GG + + R L
Sbjct: 103 IAVVYGGESYTKQFRAL 119
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIA+A +GTGKT F I +++ ID QAL+L PTRELA QIQ + L +
Sbjct: 52 VIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVR 111
Query: 436 HACI-GGTNVREDIRQL 483
C+ GG + + I L
Sbjct: 112 SVCLYGGAPIEKQITTL 128
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT-SIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
V+A +++G+GKTA F I +LQ++ +AL++ PTRELA Q KVV LG +
Sbjct: 64 VVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 433 CHACIGGTNVRE 468
C +GG + E
Sbjct: 124 CACLVGGDQIEE 135
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ A++G+GKTA F++ IL ++ AL L PTRELA Q+ + ALG L +C
Sbjct: 117 VLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRC 176
Query: 436 HACIGG 453
A IGG
Sbjct: 177 LAAIGG 182
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILXPTRELAQQIQKVVIALGD 417
V+A AQ+GTGKTA + + ++Q + RE +ALIL PTRELAQQ+ +
Sbjct: 43 VLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQ 102
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
H GGT++R QL
Sbjct: 103 HTELAIVTVYGGTSIRVQQEQL 124
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 54.4 bits (125), Expect = 1e-06
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILXPTRELAQQIQKVVIALGDH 420
V+A AQ+GTGKTA F++ ILQ++ Q ALIL PTRELA Q+ + A H
Sbjct: 41 VLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKH 100
Query: 421 LNAKCHACIGGTNVREDIRQL 483
+N GG + ++L
Sbjct: 101 MNISVLTIYGGMKMATQAQKL 121
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVV 402
+I QAQ+GTGKTA F + +L +I+ +I Q LIL PTRELA Q+ + V
Sbjct: 52 IIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAV 100
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI--DTSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
+I + +GTGKTA F I +++ + S Q L++ PTRELA+QI+ I H +
Sbjct: 43 LIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHL 102
Query: 430 KCHACIGGTNVREDIRQL 483
K + IGG + + ++QL
Sbjct: 103 KVVSLIGGIPIWQQLKQL 120
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCH 438
+ QA++GTGKTA F + IL + + ALIL PTRELA QI+ +LN +
Sbjct: 13 LIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARYLNVRTF 69
Query: 439 ACIGGTNVREDIRQL 483
A GGT V D++ L
Sbjct: 70 AFYGGTKVFGDLKVL 84
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQK 396
+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+ PTRELA QI +
Sbjct: 42 IIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Psychroflexus torquis ATCC 700755
Length = 443
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
T I + +GTGKT FS+ +L +D + Q LIL P+RELA QI++V+ +G
Sbjct: 35 TNTILLSPTGTGKTLAFSLPLLTILDPESPDVQVLILVPSRELAIQIEQVIRTMGS--GY 92
Query: 430 KCHACIGGTNVRED 471
K +A GG V +D
Sbjct: 93 KVNAVYGGRPVSKD 106
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 54.0 bits (124), Expect = 2e-06
Identities = 30/78 (38%), Positives = 45/78 (57%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
T VI QA++G+GKTA F + IL++ S + QAL+L PTRELA Q+ + L +
Sbjct: 43 TDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGL 101
Query: 430 KCHACIGGTNVREDIRQL 483
GGT++ + + L
Sbjct: 102 SIVTVYGGTDLEKQAKTL 119
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILXPTRELAQQIQKVVIALGDHL 423
V+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V G +L
Sbjct: 41 VMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYL 100
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ GG + I++L
Sbjct: 101 PLRSAVVFGGVPINPQIQKL 120
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I ++Q+G+GKTA F+I I Q +D + QAL+L PTRELA Q+++ + +G K
Sbjct: 44 IIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKV 103
Query: 436 HACIG 450
A G
Sbjct: 104 AAVYG 108
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVLSLK 268
+ F D L +ELL+ I FE P+ +QQ+ I ++ + + +K
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVK 47
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
V+ QAQ+GTGKTA+F++ IL +ID QAL+L PTRELA Q+
Sbjct: 47 VLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILXPTRELAQQIQKVVIALGDH 420
V QAQ+GTGKTATF ISI ++ + + +ALIL PTREL QI+K ALG +
Sbjct: 41 VAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKY 100
Query: 421 LNAKCHACIGGTN 459
A GG +
Sbjct: 101 TGFNIQAIYGGVD 113
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 54.0 bits (124), Expect = 2e-06
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
AL ++ AQ+GTGKTA F++ +L +ID ++ E Q L+L PTRELA Q+ +
Sbjct: 57 ALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYA 116
Query: 415 DHL-NAKCHACIGGTNVREDIRQL 483
N GG + IR L
Sbjct: 117 SKFRNFHVLPIYGGQDFSPQIRGL 140
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILXPTRELAQQIQKVVIALGDHL 423
V+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V G +L
Sbjct: 41 VMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYL 100
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ GG + I++L
Sbjct: 101 PLRSAVVFGGVPINPQIQKL 120
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL- 411
A+ + VI Q+Q+GTGKT + + +L +ID + Q +I PTRELA QI + + +
Sbjct: 37 AVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKIT 96
Query: 412 ----GDHLNAKCHACIGGTNVREDIRQL 483
G + +KC IGGT+ ++ I +L
Sbjct: 97 QGEEGSQIRSKCF--IGGTDKQKSIDKL 122
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L+ ++AQA++G+GKTA+F+I +++ ++ + +A+IL PTRELA Q+ + +L
Sbjct: 41 LNDEYNIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKG 99
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ N K GG + I+ L
Sbjct: 100 NKNLKIAKIYGGKAIYPQIKAL 121
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
F+++NL + +L I GFEKP+ IQ + I
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVI 37
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 53.6 bits (123), Expect = 2e-06
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI----DTSIRECQ----ALILXPTRELAQQIQKVVIAL 411
V+A AQ+GTGKTA F++ +L ++ +TS+ + ALI+ PTRELA QI + V
Sbjct: 45 VMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKY 104
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
G +L + GG N+ I L
Sbjct: 105 GKYLALRTAVVFGGINIEPQIAAL 128
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILXPTRELAQQIQKVVIALGDHL 423
++A AQ+GTGKTA F + I++ + + + +L+L PTRELA Q++ A +L
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ A GG ++R +++L
Sbjct: 124 ALRSDAVFGGVSIRPQVKRL 143
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 53.6 bits (123), Expect = 2e-06
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQID---TSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
++ QA +GTGKTA F++ +L ++ T QAL+L PTRELA Q+ + + G L
Sbjct: 97 LLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLG 156
Query: 427 AKCHACIGGTNVREDIRQL 483
A+ GG + +R L
Sbjct: 157 ARVLPVYGGAPIGRQVRAL 175
Score = 39.9 bits (89), Expect = 0.030
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 113 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ + P + GR L
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDL 97
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 53.6 bits (123), Expect = 2e-06
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILXPTRELAQQIQKVVIALGDHLNA 429
V+ QAQ+GTGKTA F++ ++ +D + R+ Q L+L PTRELA Q+ + A ++
Sbjct: 47 VLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPN 106
Query: 430 KCHACI-GGTNVREDIRQL 483
ACI GG IR L
Sbjct: 107 LDVACIYGGQEYGSQIRAL 125
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 53.6 bits (123), Expect = 2e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+IAQA++GTGKTA F + +L ++ Q LIL PTREL +Q+ K + L + N K
Sbjct: 44 LIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIK 103
Query: 433 CHACIGGTNVREDIRQL 483
+ GG R ++ +
Sbjct: 104 LLSLGGGMPFRPQMKSV 120
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL 411
VIAQA+SGTGKT TF + L+++D R QAL L PTRE A Q + + +
Sbjct: 77 VIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 670
Score = 53.6 bits (123), Expect = 2e-06
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 220 ATRNNALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILXPTRELAQQ 387
AT L R +AQA++GTGKT F I +Q + R Q L++ PTRELAQQ
Sbjct: 107 ATLRPLLSERVDCLAQAKTGTGKTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQ 166
Query: 388 IQKVVIALGDHL-NAKCHACIGGTN 459
I K L +L N K IGGTN
Sbjct: 167 IAKEASQLLKNLPNYKVGFAIGGTN 191
>UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 456
Score = 53.6 bits (123), Expect = 2e-06
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +1
Query: 220 ATRNNALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILXPTRELAQQ 387
AT L R +AQA++GTGKT F I +Q + R Q L++ PTRELAQQ
Sbjct: 110 ATLRPLLSERADCLAQAKTGTGKTIAFLIPAIQTLINKQRRPQDGISLLVMTPTRELAQQ 169
Query: 388 IQKVVIALGDHL-NAKCHACIGGTN 459
I K L L N K IGGTN
Sbjct: 170 IAKEASQLLQRLPNYKVGFAIGGTN 194
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I A +G+GKT F I+Q+I+ +AL+L PTRELA+Q+Q + H +
Sbjct: 42 IIGGAATGSGKTLAFGCGIIQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRV 100
Query: 436 HACIGGTNVREDIRQL 483
GG + IRQL
Sbjct: 101 APIYGGVAINPQIRQL 116
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQ 387
V QAQ+GTGKTA F I I++++D + QAL+L PTRELA Q
Sbjct: 45 VTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+TF + + EELL+ I GFE+P+ IQ I + G+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGK 43
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 53.6 bits (123), Expect = 2e-06
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILXPTRELAQQIQKVVIALGDHLNA 429
V+A A++G+GKTA F I +L+++ + + +ALIL PTR+LA+Q K LG +
Sbjct: 68 VVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDL 127
Query: 430 KCHACIGGTNVREDIRQL 483
+ +GG ++ + +L
Sbjct: 128 RVSLLVGGDSMEDQFEEL 145
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ ++++GTGKTA++ + +L I++S Q +IL P RELA QI + V + +
Sbjct: 148 LLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGVIS 207
Query: 436 HACIGGTNVREDI 474
+GGT++++DI
Sbjct: 208 APVVGGTSMQDDI 220
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++ +AQ+GTGKTA F++ +L ++D +++ Q L+L PTRELA Q+ + +L
Sbjct: 84 LLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFH 143
Query: 433 CHACIGGTNVREDIRQL 483
GG ++ +RQL
Sbjct: 144 VLPVYGGQSMVVQLRQL 160
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI------DTSIRECQALILXPTRELAQQIQKVVIALGD 417
+I +AQ+GTGKTA F I++LQ++ + E +ALIL PTRELA QI K L
Sbjct: 138 IIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSK 197
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ + +GG + + QL
Sbjct: 198 YADLNIVTVLGGVDYDKQKEQL 219
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 53.2 bits (122), Expect = 3e-06
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI------DTSIRECQALILXPTRELAQQIQKVVIALGD 417
V+A A +G+GKTA F++ +LQ++ + S + + L+L PTRELAQQ+ ++
Sbjct: 49 VLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYAS 108
Query: 418 HLNA--KCHACIGGTNVREDIRQL 483
H N K A GG +V ++ L
Sbjct: 109 HFNGQLKIVAAFGGVSVNLQMQSL 132
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI-QKVVIALGDHLNAK 432
VI QAQ+G+GKT F I L++I+ + QA++L PTRELA+Q+ Q+ A D N K
Sbjct: 44 VIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIK 103
Query: 433 CHACIGGTNVREDIRQL 483
GG + I+ L
Sbjct: 104 VTTLCGGQPMGPQIQSL 120
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +1
Query: 268 AQSGTGKTATF---SISILQQIDTSI--RECQALILXPTRELAQQIQKVVIALGDHLNAK 432
AQ+GTGKTA F SI L++ D I + C+ L+L PTREL QI G K
Sbjct: 46 AQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLK 105
Query: 433 CHACIGGTNVREDIRQL 483
+ +GGT+V +D +L
Sbjct: 106 VQSIVGGTSVNKDRNKL 122
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
F D+ L + +L+ + G+ P+ IQ++ I P ++GR L
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDL 42
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 152 MNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKG 33
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI 324
VI QAQSGTGKTATF ILQQ+
Sbjct: 36 VIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
++ QA+SGTGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G + N +
Sbjct: 62 LLVQAKSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFR 121
Query: 433 CHACIGGTNVREDIRQL 483
+ IGG ++ +D + L
Sbjct: 122 AKSFIGGLDISQDRKNL 138
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +1
Query: 253 RVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
++I QA++GTGKTA F +++L I+T + + L++ TRELAQQ + + LG + +
Sbjct: 112 QLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSV 171
Query: 433 CHACI--GGTNVREDIRQL 483
C GG V +I+ +
Sbjct: 172 KVECFYGGGEPVSVNIQTI 190
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
V F + LKEELLR + GFE P+ +Q + + G L
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQL 113
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 53.2 bits (122), Expect = 3e-06
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT------SIRECQALILXPTRELAQQIQKVVIALGD 417
++A AQ+GTGKTA F++ +LQ + T R +ALIL PTRELA QI + V
Sbjct: 41 LMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK 100
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+LN + GG ++ + +L
Sbjct: 101 YLNIRSLVVFGGVSINPQMMKL 122
Score = 35.1 bits (77), Expect = 0.85
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
+FD + L ++LR + G+ +P+ IQQ+ I ++GR L
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDL 41
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQID----TSIRECQALILXPTRELAQQIQKVVIALGDHL 423
V+A A++G+GKT F + +++++ T ALI+ PTRELA QI +V+ +G H
Sbjct: 81 VLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHT 140
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ IGG +V+ ++ ++
Sbjct: 141 SFSAGLVIGGKDVKFELERI 160
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 52.8 bits (121), Expect = 4e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILXPTRELAQQIQKVVIAL 411
+IA A++GTGKT + I ++Q + +TS AL+L PTRELA QIQK + L
Sbjct: 216 LIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKL 275
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
+ CIGG ++ I +L
Sbjct: 276 ATPFGLRVCCCIGGEPMQPQIEEL 299
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 52.8 bits (121), Expect = 4e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V A A +G+GKT + + +L+++ TS E QAL+L PTRELA Q+ +V+ +G L
Sbjct: 62 VFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVGTALGLNT 120
Query: 436 HACIGGTNVRE 468
GG + E
Sbjct: 121 LCLCGGVDKTE 131
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIA++ +GTGKT + + +L +I+ +++ Q ++L PTREL QI + V
Sbjct: 38 VIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTAGTEISG 97
Query: 436 HACIGGTNVREDIRQL 483
+ IGG +++ + +L
Sbjct: 98 ASLIGGADIKRQVEKL 113
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 52.8 bits (121), Expect = 4e-06
Identities = 29/82 (35%), Positives = 41/82 (50%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
L R V+ +A +GTGKT + I L+ ID + Q +I PTREL QI +V+
Sbjct: 31 LRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQVIQLFSQ 90
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
K A IGG ++ +L
Sbjct: 91 GSGIKSGAFIGGVELKRQHERL 112
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 52.8 bits (121), Expect = 4e-06
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQ--IDTSIRECQ---ALILXPTRELAQQIQKVVIALGDHLNA- 429
A++G+GKTA F+I +LQ + IR AL+L PTRELAQQI+K V A L +
Sbjct: 162 AETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESL 221
Query: 430 KCHACIGGTNVREDIRQL 483
K +GGTN+ + +L
Sbjct: 222 KNCIVVGGTNIEKQRSEL 239
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+ AQ+G+GKTA F IS+L ++ CQA+I+ PT+EL+ Q +V+ LG +
Sbjct: 43 ISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLGTRSGIRG 102
Query: 436 HACIGGTNVREDIRQL 483
G +E ++
Sbjct: 103 VCLTSGVMAKEQFEKI 118
Score = 37.5 bits (83), Expect = 0.16
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVLSL 265
F+D+ +L++ IY YGFE PS +QQ I IQG+ +S+
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISV 45
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 52.8 bits (121), Expect = 4e-06
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = +1
Query: 262 AQAQSGTGKTATFSISILQQIDTSIREC--QALILXPTRELAQQIQKVVIALGDHLNAKC 435
A A +G+GKTA F I IL + ++ C +ALI+ PTRELA+Q Q+ + LGD +N +
Sbjct: 184 ACAPTGSGKTAAFLIPILHHLKKPMK-CGFRALIICPTRELAKQTQREALRLGDEMNLRT 242
Query: 436 H 438
H
Sbjct: 243 H 243
>UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|Rep:
DEAD-box RNA helicase - Athelges takanoshimensis
Length = 124
Score = 52.8 bits (121), Expect = 4e-06
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTS----IRECQALILXPTRELAQQIQKVVIALGDHLN 426
+A AQ+GTGKTA F++ +LQ + + R +AL+L P+RELA QI + V HL+
Sbjct: 1 MACAQTGTGKTAGFTLPVLQYLSETKHPKYRPVRALVLTPSRELAAQILENVKEYSTHLD 60
Query: 427 AKCHACIGGTNVREDIRQL 483
K GG I+ L
Sbjct: 61 IKSTVVFGGVKASGQIKTL 79
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ A++G+GKTA F++ I+ + T AL+L PTRELA QI A G +N +
Sbjct: 70 VLGGAETGSGKTAAFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRV 129
Query: 436 HACIGGTNV 462
+GG +V
Sbjct: 130 VQVVGGVDV 138
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I +Q+GTGKT + + +L + + + QALIL PT+ELA QI +V L +
Sbjct: 42 LIVHSQTGTGKTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTSITV 101
Query: 436 HACIGGTNVREDIRQL 483
IGG N++ + +L
Sbjct: 102 LPLIGGANIKRQVEKL 117
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 52.4 bits (120), Expect = 5e-06
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQ------ALILXPTRELAQQIQKVVIALGD 417
++ AQ+G+GKT + +++ + + I + ALI+ PTRELA Q+Q+ + L +
Sbjct: 39 LLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQVQRELAWLYE 98
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
H + + +C+GG + R + R+L
Sbjct: 99 HADGRVVSCVGGMDPRREQREL 120
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 52.4 bits (120), Expect = 5e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQI-------DTSIRECQALILXPTRELAQQIQKVVIALGD 417
I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+ PTREL QI K AL
Sbjct: 50 IGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTK 109
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ +GG + + ++QL
Sbjct: 110 YTGLNVMTFVGGMDFDKQLKQL 131
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 52.0 bits (119), Expect = 7e-06
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIAL------GD 417
VI Q+Q+G+GKT + + L +I+ E Q +I PTRELAQQI + ++ L
Sbjct: 44 VIGQSQTGSGKTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQ 103
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ A+C IGGT+ + I +L
Sbjct: 104 MITARC--LIGGTDKQRSIEKL 123
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 52.0 bits (119), Expect = 7e-06
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDTSI-----RECQALILXPTRELAQQIQKVVIALGDHLNAK 432
AQ+GTGKTA F++ + + T+ R C+ LIL PTRELA QI + HL
Sbjct: 50 AQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMS 109
Query: 433 CHACIGGTNVREDIRQL 483
+A GG + +R L
Sbjct: 110 VNAVFGGVPIGRQMRML 126
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 52.0 bits (119), Expect = 7e-06
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-DTSIRECQALILXPTRELAQQIQKVVIAL-GDHLNA 429
++ QAQ+GTGKTA F++ +++++ D + L++ PTRELA Q+ + + + N
Sbjct: 91 LLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNF 150
Query: 430 KCHACIGGTNVREDIRQL 483
K A GGT+ R I L
Sbjct: 151 KTIAIYGGTDYRNQIYAL 168
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 52.0 bits (119), Expect = 7e-06
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-DTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
++A AQ+GTGKT F I L+ + DT Q LIL PTRELA Q+ V L
Sbjct: 67 ILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKS 126
Query: 433 CHACIGGTNVREDIRQL 483
+GGT+ R I+ +
Sbjct: 127 AALVMGGTSERNQIQSI 143
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 52.0 bits (119), Expect = 7e-06
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVV 402
V+ AQ+GTGKTA F + +L +D R QAL+L PTRELA Q + +
Sbjct: 85 VVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ QA+SG GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K
Sbjct: 85 VLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVK 144
Query: 433 CHACIGGTNVRED 471
GG ++++D
Sbjct: 145 VAVFFGGLSIKKD 157
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
F D LK ELLR I GFE PS +Q I I G
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG 82
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 52.0 bits (119), Expect = 7e-06
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 113 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ I P I GR
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGR 76
Score = 50.0 bits (114), Expect = 3e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +1
Query: 262 AQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCHA 441
AQAQSGTGKT F+++ LQ D S Q L+L TRE+A Q LG + A+
Sbjct: 80 AQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVAL 139
Query: 442 CIGGTNVRED 471
GG+ + D
Sbjct: 140 LSGGSPIAAD 149
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +1
Query: 241 HPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALG 414
HP +IAQ+QSGTGKTA F +++L +++ Q L L PT ELA Q +VV +G
Sbjct: 134 HPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQ 223
V+TF+++ LKEELL+GIYA GF +PS IQ+
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQE 125
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 51.6 bits (118), Expect = 9e-06
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
VIAQA++GTGKT +F + ++ QQ S R+ L L PTRELA+QI + A+G HL
Sbjct: 142 VIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIGPHL 201
Query: 424 NAKCHACIGGTN 459
+ C GGT+
Sbjct: 202 STTC--IYGGTS 211
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 51.6 bits (118), Expect = 9e-06
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-DTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
V+ AQ+GTGKTA +++ +LQQ+ + + +ALIL PTR+LA QI + G + +
Sbjct: 53 VVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLR 112
Query: 433 CHACIGG 453
C GG
Sbjct: 113 CATIYGG 119
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 51.6 bits (118), Expect = 9e-06
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQ----QIDTSIRECQ----ALILXPTRELAQQIQKVVIAL 411
V+ AQ+GTGKTA+FS+ I+Q Q +TS + ALIL PTRELA Q+ V A
Sbjct: 51 VMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAY 110
Query: 412 GDHLNAKCHACIGGTNVREDIRQL 483
H + GG ++ + +L
Sbjct: 111 AKHTPLRSAVVFGGVDMNPQMAEL 134
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 51.6 bits (118), Expect = 9e-06
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IAQAQ+GTGKTA F + I+ + + L++ PTRELA Q+ + G K
Sbjct: 41 MIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFGKLSGLKT 99
Query: 436 HACIGGTNVREDIRQL 483
GGT + I ++
Sbjct: 100 ATVYGGTAYGKQIERI 115
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 51.6 bits (118), Expect = 9e-06
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
P +IAQA +G+GKT F++ +L +ID +++ Q L++ PTREL Q V+ +G +
Sbjct: 126 PHRNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKY 184
Score = 35.9 bits (79), Expect = 0.49
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYA-YGFEKPSAIQ 220
+TF+D+ L ELLRG+Y FEKPS IQ
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQ 115
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 51.6 bits (118), Expect = 9e-06
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCHACI 447
A++G+GKT F++ ILQ++ AL+L PTRELA QI++ + A G+ L + + I
Sbjct: 105 ARTGSGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNPLGIQAQSLI 164
Query: 448 GG 453
GG
Sbjct: 165 GG 166
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 51.6 bits (118), Expect = 9e-06
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
V+A A++G+GKTA F I ILQ + T ++ ALI+ PTRELA QI
Sbjct: 41 VVACAKTGSGKTAAFLIPILQSLMTELKPLYALIITPTRELAHQI 85
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 51.6 bits (118), Expect = 9e-06
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQID--TSIRECQALILXPTRELAQQIQKVVIALGDHLNA 429
V+A +++G+GKTA+F + I+Q+++ ++I C+ LI+ P+RELA Q N
Sbjct: 40 VVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTGHYFQKYASQTNL 99
Query: 430 KCHACIGG 453
KC IGG
Sbjct: 100 KCAQIIGG 107
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 51.6 bits (118), Expect = 9e-06
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 17/93 (18%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI---DTSIREC--------------QALILXPTRELAQ 384
++AQA++GTGKT F I ++Q+I D S++E +A+I+ PTRELA+
Sbjct: 18 LVAQAKTGTGKTLAFLIPVIQKILDADPSLKEVSRGRPRRFAQRQSIKAIIISPTRELAE 77
Query: 385 QIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
QI K L +GGT RE +R++
Sbjct: 78 QIGKEATRLCQRNGVTVQTAVGGTGKRESLRRI 110
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 51.6 bits (118), Expect = 9e-06
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 262 AQAQSGTGKTATFSISILQQI---DTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
A A +G+GKTA F++ L+++ + + LIL PTRELA QI ++ L + K
Sbjct: 209 ASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIK 268
Query: 433 CHACIGGTNVRE 468
C +GG +VRE
Sbjct: 269 CGLIVGGLSVRE 280
Score = 33.1 bits (72), Expect = 3.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
+TF ++NL LLR G++KP+ IQ I + GR L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDL 207
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 51.2 bits (117), Expect = 1e-05
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+I AQ+GTGKTA F+I ++ ++ + QALIL PTREL Q+ + L + N +
Sbjct: 49 IIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFE 108
Query: 433 CHACIGGTNVREDIRQL 483
GG + +R L
Sbjct: 109 VVPIYGGQEIERQLRAL 125
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ ++Q+G+GKTA+F I + + ++ + QAL+L PTRELA Q+++ + +G K
Sbjct: 44 LVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKA 103
Query: 436 HACIG 450
A G
Sbjct: 104 AAIYG 108
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 51.2 bits (117), Expect = 1e-05
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V A+A++G+GKTA F I +L +I S QAL+L PTRELA Q+ K + L N K
Sbjct: 44 VRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIK 103
Query: 433 CHACIGGTNVREDIRQL 483
GG + + + L
Sbjct: 104 ILTLCGGQPMGQQLDSL 120
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 51.2 bits (117), Expect = 1e-05
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQI-DTSIRE-CQALILXPTRELAQQIQKVVIALGDHLNAKCHA 441
AQ+GTGKTA FSI ILQ++ T R+ +AL+L PTRELA QI + A G + K HA
Sbjct: 45 AQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HA 103
Query: 442 CIGG 453
I G
Sbjct: 104 VIFG 107
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVL 259
TF+++NL E +L+ + G+ P+ IQ++ I +QG+ L
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDL 41
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI---DTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
V+A A +GTGKTA F + LQ + R+ + LIL PTRELA QI KVV LG H
Sbjct: 41 VLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCP 100
Query: 427 AKCHACIGG 453
+ + GG
Sbjct: 101 FESNVVTGG 109
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 51.2 bits (117), Expect = 1e-05
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
V+A A +G+GKTA F + IL Q ID +AL++ PTRELA QI + + L H
Sbjct: 41 VMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPIS 100
Query: 433 CHACIGGTNVR 465
A GG ++R
Sbjct: 101 AAAVFGGVSIR 111
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V AQ+GTGKTA F++ IL ++ R + L+L PTRELA Q+++ + +
Sbjct: 173 VTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTA 232
Query: 436 HACIGGTNV---REDIRQ 480
GG RED+++
Sbjct: 233 TVVYGGVGYGKQREDLQR 250
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 51.2 bits (117), Expect = 1e-05
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAKC 435
+ +A++GTGKTA F+I LQ + ++ Q LIL P REL +QI + I LG L N +
Sbjct: 46 LVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRV 105
Query: 436 HACIGG 453
GG
Sbjct: 106 AEVTGG 111
Score = 36.3 bits (80), Expect = 0.37
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F D+ LK+ +L IY G++KP+ IQ + + +QG+
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQ 43
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 51.2 bits (117), Expect = 1e-05
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTS-------IRECQALILXPTRELAQQIQKVVIALGD 417
I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+ PTREL QI K AL
Sbjct: 50 IGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTK 109
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ + +GG + + ++ L
Sbjct: 110 YTGLNVMSFVGGMDFDKQLKAL 131
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
V+ AQ+G+GKTA F++ +L QID S + Q L++ PTRELA Q+
Sbjct: 45 VLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQV 89
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
TF+D+ L E +L+ + GFE PS IQQ I + G
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNG 42
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILXPTRELAQQIQKVVIALGDHLNA 429
V+A A++G+GKTA F I + +++ T + +ALIL PTRELA Q Q+ + +G
Sbjct: 78 VVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGL 137
Query: 430 KCHACIGGTNV 462
K +GG ++
Sbjct: 138 KSSVILGGDSM 148
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
R +I A +GTGKT F + IL +D S ++ Q +I+ PTRELA+QI +I H
Sbjct: 37 RENIIGVAPTGTGKTLAFVLPILNNLDLS-QKLQVIIITPTRELARQIFSKIIVFKKHQP 95
Query: 427 -AKCHACIGGTNVREDI 474
+ IGG ++ + I
Sbjct: 96 LLQVKMLIGGESIDQQI 112
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
V+ AQ+GTGKTA+F++ IL + I + + L+L PTREL+ QI A G H
Sbjct: 56 VVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRH 115
Query: 421 LNAKCHACIGGTNVREDIRQL 483
+ IGG + +R L
Sbjct: 116 IRLSSTLAIGGVPMGRQVRSL 136
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTS--IRECQALILXPTRELAQQIQKVVIALGDHLNA 429
V+ +Q+G+GKTA F + +LQ++ + +ALIL PTRELA Q V LG L+
Sbjct: 60 VLVGSQTGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSL 119
Query: 430 KCHACIGGTNVREDIRQL 483
K GGT+ + ++ +
Sbjct: 120 KTRVICGGTSREQQVQSV 137
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQ-----IDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
AQ+GTGKTA FS+ I+ + ID + ++LIL PTRELA QI + + D L K
Sbjct: 46 AQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLK 105
Query: 433 CHACIGG 453
GG
Sbjct: 106 TKVVYGG 112
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+IA++++G+GKTA F+I I + I QAL+L PTRELA Q++ + +G K
Sbjct: 44 IIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQVKDEIFNVGRMKRVKV 103
Query: 436 HACIGG 453
GG
Sbjct: 104 PVVFGG 109
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDTSI------RECQALILXPTRELAQQIQKVVIALGDHLNA 429
AQ+GTGKTA F+I ILQ + R+ +AL+L PTRELA QI + A G +L
Sbjct: 45 AQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYGVNLPL 104
Query: 430 KCHACIGGTNVREDIRQL 483
+ GG R+L
Sbjct: 105 RTLVIFGGVGQAPQTRKL 122
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT----SIRECQALILXPTRELAQQIQKVVIALGDHL 423
++ AQ+G+GKTA+F + ILQ + T R AL+L PTRELA Q+ +V A + L
Sbjct: 49 ILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFSNAL 108
Query: 424 --NAKCHACIGGTNVREDIRQL 483
K A GG ++ + QL
Sbjct: 109 PNKIKSLAVYGGVSINPQMIQL 130
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDT-----SIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
AQ+GTGKTA F++ +L + T + R +ALIL PTRELA QI + + L +
Sbjct: 48 AQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPIS 107
Query: 433 CHACIGGTNVREDIRQL 483
GG +VR I+ L
Sbjct: 108 HCVVFGGVSVRPQIQAL 124
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQID---TSIREC--QALILXPTRELAQQIQKVVIALGDH 420
+I AQ+GTGKTA F++ IL Q+D + C Q L+L PTRELA QI + G +
Sbjct: 36 LIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGRN 95
Query: 421 LNAKCHACIGGTNVREDIRQL 483
+ + GG +R L
Sbjct: 96 VKFRLTTIFGGVGQNPQVRAL 116
>UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n=3;
Leishmania|Rep: ATP-dependent RNA helicase, putative -
Leishmania major
Length = 625
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ A +G+GKTA F++ ILQ + AL+L P+RELA QI IA G L +
Sbjct: 42 VVGGAATGSGKTAAFALPILQTLAADAYGVFALVLTPSRELAYQIIDQFIAFGAPLRVRT 101
Query: 436 HACIGGTNVREDIRQL 483
+GG + L
Sbjct: 102 MLAVGGVPTETQVDAL 117
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCH 438
I +Q+GTGKTA F++ I+ + AL++ PTRELAQQI + G +NA
Sbjct: 44 IVISQTGTGKTAAFALPIISTLSKDPYGIYALVISPTRELAQQICQQFKIFGRGMNADIC 103
Query: 439 ACIGGTNVREDIRQL 483
IGG + + L
Sbjct: 104 PIIGGLAITDQASAL 118
>UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 568
Score = 50.8 bits (116), Expect = 2e-05
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Frame = +1
Query: 220 ATRNNALHPRTRVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILXPTRELAQQ 387
AT + + R V+AQA++GTGKT F + LQ + + + L++ PTRELA Q
Sbjct: 106 ATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGNDVSVLVISPTRELALQ 165
Query: 388 IQKVVIALGDHL-NAKCHACIGGTNVREDIRQL 483
I K AL L K IGGTN + R++
Sbjct: 166 IAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRI 198
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ QA +GTGKT +SIS+LQ+I Q LI+ PTRELA QI + V + +
Sbjct: 42 VVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRP 100
Query: 436 HACIGGTNV 462
A GG ++
Sbjct: 101 VAIYGGQSM 109
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 50.8 bits (116), Expect = 2e-05
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT-----SIRECQ----ALILXPTRELAQQIQKVVIA 408
+I A++G+GKTA F I +L I T I E A+IL PTRELAQQI++ I
Sbjct: 431 IIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIK 490
Query: 409 LGDHLNAKCHACIGGTNVRED 471
G L + A IGG + RED
Sbjct: 491 FGKPLGIRTVAVIGGIS-RED 510
>UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2;
Lactobacillus|Rep: ATP-dependent RNA helicase -
Lactobacillus plantarum
Length = 444
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
V+ A +G+GKT F+ +L+ + QALIL P++ELA Q VV G ++AK
Sbjct: 34 VLGLAPTGSGKTLAFTWPMLEALRVG-EGTQALILAPSQELAMQTTNVVREWGQLIDAKV 92
Query: 436 HACIGGTNVREDIRQL 483
A GG NV+ + +L
Sbjct: 93 LAITGGANVKRQMEKL 108
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 50.4 bits (115), Expect = 2e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQIDTSIRE---CQALILXPTRELAQQIQKVVIALGDHLNAKCH 438
A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + + G L
Sbjct: 80 AATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVV 139
Query: 439 ACIGGTNVREDIRQL 483
GG + + +R L
Sbjct: 140 PLYGGQVISQQLRVL 154
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 71 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMP 238
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ + P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 239 CIQGRVL 259
++G+ L
Sbjct: 70 LLEGKDL 76
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSI---RECQALILXPTRELAQQIQKVVIALGDHLN 426
+I QA++GTGKT F++ I +++ S R+ +AL+L PTRELA Q+ + A+ HL
Sbjct: 41 LIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL- 99
Query: 427 AKCHACIGGT 456
K A GGT
Sbjct: 100 -KVVAVYGGT 108
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQ---IDTS---IRECQALILXPTRELAQQIQKVVIAL 411
T A A +GTGKTA + + LQ+ +D S +R +AL L PTRELA Q+++ +
Sbjct: 40 TDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKY 99
Query: 412 GDHLNAKCHACIGGTNVREDIRQ 480
G LN + + GG + + +
Sbjct: 100 GKGLNLRTISVFGGVRIPSQVNR 122
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI---DTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
++A A +G+GKTA F + +L+++ D+ R + LIL PTRELA Q Q V+ L N
Sbjct: 230 ILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSN 289
Query: 427 AKCHACIGG 453
+GG
Sbjct: 290 ITSCLIVGG 298
Score = 32.7 bits (71), Expect = 4.5
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 125 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
++ + TF++++L LL+ + GF +P+ IQ + I + G+
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
>UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1;
Mycoplasma penetrans|Rep: ATP-dependent RNA helicase -
Mycoplasma penetrans
Length = 457
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
V+ +Q+GTGKT + + IL+ I+ +E QA+I+ PT+EL +QI K++ H N
Sbjct: 39 VVLVSQTGTGKTLCYLLPILENINLDSKELQAVIVVPTKELIRQITKILSFFKKHNN 95
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTS---IRECQALILXPTRELAQQIQKVVIALGDHLN 426
V+ AQ+GTGKTA+F++ +LQ++ S R ++LIL PTRELA Q+ + G +L
Sbjct: 331 VLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLR 390
Query: 427 AKCHACIGGTNVRE 468
IGG ++ E
Sbjct: 391 LTHALLIGGESMAE 404
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 50.0 bits (114), Expect = 3e-05
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQI------DTSIRECQALILXPTRELAQQIQKVVIALGDH 420
I +AQ+GTGKTA F I+ + + + + E +ALIL PTRELA QI + AL +
Sbjct: 68 IGKAQTGTGKTAAFLITAITDLLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKY 127
Query: 421 LNAKCHACIGGTNVREDIRQL 483
K A +GG + + +QL
Sbjct: 128 SRLKVAAVVGGMDFDKQKQQL 148
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILXPTRELAQQIQKVVIALGDHLN 426
++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PTRELA Q+ + L
Sbjct: 62 IMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLP 121
Query: 427 AKCHACIGGTNV 462
K A GG N+
Sbjct: 122 LKTLAVYGGANM 133
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 50.0 bits (114), Expect = 3e-05
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSI--RECQALILXPTRELAQQIQK----VVIALGD 417
VI QA+SG GKTA F +S+L ID + QAL+L T ELA QI K I L D
Sbjct: 168 VICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELAMQIYKEFTRFAINLPD 227
Query: 418 HLNAKCHACIGGTNVREDIRQL 483
+ K IGG V +R L
Sbjct: 228 -IKDKILCAIGGVTVSLHVRAL 248
Score = 39.1 bits (87), Expect = 0.052
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQ 247
F D NL+EE+L+ I + GFE PS +Q I P ++
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALE 164
>UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 579
Score = 50.0 bits (114), Expect = 3e-05
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT---SIRECQALILXPTRELAQQIQKVVIALGDHLN 426
V +AQ+G+GKT TF + + Q S + L+L P RELAQQI V +
Sbjct: 46 VAVEAQTGSGKTLTFLVPLFNQFSKQKYSDHQLFGLVLSPARELAQQIYDVAKNFQNVNQ 105
Query: 427 AKCHACIGGTNVREDIRQL 483
AK IGGT+ D++ L
Sbjct: 106 AKIAFAIGGTSNEHDVKYL 124
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 50.0 bits (114), Expect = 3e-05
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILXPTRELAQQIQKVVIALG 414
LH R ++A A +G+GKT FSI IL Q+ + +ALI+ PTRELA QI + +I +
Sbjct: 199 LHGR-ELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 257
Query: 415 DHLNAKCH 438
+ + H
Sbjct: 258 EGTGFRIH 265
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I A++G+GKT F++ IL + + + AL+L PTRELA QI + ALG + +
Sbjct: 53 IIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQS 112
Query: 436 HACIGG 453
+GG
Sbjct: 113 AVIVGG 118
>UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116,
mitochondrial precursor; n=7; Trichocomaceae|Rep:
ATP-dependent RNA helicase mss116, mitochondrial
precursor - Aspergillus fumigatus (Sartorya fumigata)
Length = 655
Score = 50.0 bits (114), Expect = 3e-05
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI--DTSIR------------ECQALILXPTRELAQQIQ 393
V+AQA++GTGKT F + Q I D S++ + +A+I+ PTRELA+QI
Sbjct: 125 VLAQAKTGTGKTLAFLTPVFQNIMKDPSLKGLNWRRSQASSSDIRAIIISPTRELAEQIA 184
Query: 394 KVVIALGDHLNAKCHACIGGTNVREDIRQL 483
L H +GGT RE +R++
Sbjct: 185 VEARRLAAHSGVIVQTAVGGTQKREGLRRI 214
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 50.0 bits (114), Expect = 3e-05
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILXPTRELAQQIQKVVIALG 414
LH R ++A A +G+GKT FSI IL Q+ + +ALI+ PTRELA QI + +I +
Sbjct: 200 LHGR-ELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKIS 258
Query: 415 DHLNAKCH 438
+ + H
Sbjct: 259 EGTGFRIH 266
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
+I A++G+GKT F++ IL + + + AL+L PTRELA QI + ALG + +
Sbjct: 64 IIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQS 123
Query: 436 HACIGG 453
+GG
Sbjct: 124 AVIVGG 129
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI K ++ + K
Sbjct: 84 VLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVK 143
Query: 433 CHACIGGTNVRED 471
GG ++++D
Sbjct: 144 VSVFFGGLSIKKD 156
Score = 35.5 bits (78), Expect = 0.64
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 41 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 217
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 218 QQRXIMPCIQG 250
Q I I G
Sbjct: 71 QHECIPQAILG 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,015,945
Number of Sequences: 1657284
Number of extensions: 10755218
Number of successful extensions: 32930
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 31241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32555
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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