Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30287
(485 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 6e-30
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 4e-29
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 83 1e-16
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 74 5e-14
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 74 5e-14
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 68 5e-12
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 58 3e-09
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 58 5e-09
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 52 2e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 47 9e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 46 1e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 46 2e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 42 3e-04
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 41 5e-04
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 37 0.008
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.018
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 36 0.023
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.071
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 33 0.094
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 0.50
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 4.7
SB_44917| Best HMM Match : DUF156 (HMM E-Value=3) 27 8.2
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23) 27 8.2
SB_10225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 127 bits (306), Expect = 6e-30
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L PTRELA QIQKVV+ALGD+++ +C
Sbjct: 37 VIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYMSVQC 96
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTN+ EDIR+L
Sbjct: 97 HACIGGTNIGEDIRKL 112
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 194 GFEKPSAIQQRXIMPCIQGR 253
GFEKPSAIQQR I P ++GR
Sbjct: 16 GFEKPSAIQQRAIKPILKGR 35
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 124 bits (299), Expect = 4e-29
Identities = 62/93 (66%), Positives = 76/93 (81%), Gaps = 6/93 (6%)
Frame = +1
Query: 223 TRNNALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILXPTRELAQ 384
T+N+ + VIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+L PTRELAQ
Sbjct: 114 TKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQ 173
Query: 385 QIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
QIQKVV+ALGD+++ KCHACIGGTNVRED +L
Sbjct: 174 QIQKVVLALGDYMHVKCHACIGGTNVREDRMKL 206
Score = 84.2 bits (199), Expect = 5e-17
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +2
Query: 104 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQ 247
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQR I PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQ 99
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/50 (72%), Positives = 45/50 (90%)
Frame = +1
Query: 334 IRECQALILXPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
+RE QAL+L PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKL 50
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 74.1 bits (174), Expect = 5e-14
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++A+A++GTGKTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+
Sbjct: 87 ILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQV 146
Query: 436 HACIGGTNVREDIRQL 483
GGT++++DI +L
Sbjct: 147 MVTTGGTSLKDDILRL 162
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D LK ELL GI+ GF+KPS IQ+ I + GR
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGR 85
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 74.1 bits (174), Expect = 5e-14
Identities = 33/76 (43%), Positives = 54/76 (71%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++A+A++GTGKTA + + +L++ DT+ QAL+L PTRELA Q ++ I LG H+ A+
Sbjct: 87 ILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQV 146
Query: 436 HACIGGTNVREDIRQL 483
GGT++++DI +L
Sbjct: 147 MVTTGGTSLKDDILRL 162
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D LK ELL GI+ GF+KPS IQ+ I + GR
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGR 85
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 67.7 bits (158), Expect = 5e-12
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNA-K 432
+IAQA+SGTGKT FS+ L+ + T Q +IL PTRE+A Q++ V+ A+G H +
Sbjct: 53 LIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLA 112
Query: 433 CHACIGGTNVREDIRQL 483
C IGG ++ ED + L
Sbjct: 113 CKVFIGGISLEEDKKAL 129
Score = 30.7 bits (66), Expect = 0.67
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXI 232
F + L LLRG+ GFEKPS IQ + I
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAI 44
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 58.4 bits (135), Expect = 3e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI A++G+GKT F++ ILQ + + + ALIL PTRELA QI + ALG + KC
Sbjct: 4 VIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 436 HACIGGTNV 462
+GG ++
Sbjct: 64 AVIVGGIDM 72
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +1
Query: 244 PRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
P +IAQ+QSGTGKTA F +++L ++D + Q + L PT ELA+Q KV A+G H
Sbjct: 141 PPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKH 199
Score = 33.5 bits (73), Expect = 0.094
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQ 223
++F+++ L L RG+Y GF KPS IQ+
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQE 131
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIREC--QALILXPTRELAQQIQKVVIALGDHLNA 429
V+A A++G+GKTA F I + +++ T + +ALIL PTRELA Q QK + LG
Sbjct: 321 VVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELGRFTGL 380
Query: 430 KCHACIGGTNV 462
K +GG +V
Sbjct: 381 KSSVILGGDSV 391
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+I QA+SG GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K
Sbjct: 87 IICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIK 146
Query: 433 CHACIGGTNVREDIRQL 483
GG N+++D + L
Sbjct: 147 IAVFFGGINIKKDQQTL 163
Score = 33.9 bits (74), Expect = 0.071
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
F D LK ELLR I GFE PS +Q I I G
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG 84
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
+I QA+SG GKTA F ++ LQQ++ + L++ TRELA QI K ++ N K
Sbjct: 87 IICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIK 146
Query: 433 CHACIGGTNVREDIRQL 483
GG N+++D + L
Sbjct: 147 IAVFFGGINIKKDQQTL 163
Score = 33.9 bits (74), Expect = 0.071
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQG 250
F D LK ELLR I GFE PS +Q I I G
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG 84
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.0 bits (109), Expect = 4e-06
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILXPTRELAQQIQKVVIALGDH 420
++A AQ+G+GKTA + + +L Q ++ R AL + PTRELA+QI DH
Sbjct: 519 LMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH 578
Query: 421 LNAKCHACIGGTNVREDIRQL 483
K C GG +V QL
Sbjct: 579 TPIKVCVCYGGVSVPYQASQL 599
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 46.8 bits (106), Expect = 9e-06
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQ----QIDTSIRECQALILXPTRELAQQIQKVVIALGDHL 423
V+ A++G+GKT F I I++ Q TS+ AL++ PTRELA Q +V++ +G+
Sbjct: 90 VLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH 149
Query: 424 NAKCHACIGGTNVREDIRQL 483
+ IGG +++ + +++
Sbjct: 150 DLSAGLIIGGKDLKNEQKRI 169
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILXPTRELAQQIQKVVIA 408
+I A++G+GKTA F+I +L I + + + ALIL PTRELAQQI++ ++
Sbjct: 141 IIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILK 200
Query: 409 LGDHLNAKCHACIGGTN 459
G L + + IGG +
Sbjct: 201 FGRPLGIRTVSVIGGAD 217
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCH 438
I A++G+GKTA F++ ILQ++ A++L PTRELA QI LG + K
Sbjct: 48 IGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEA 107
Query: 439 ACIGGTNVREDIRQL 483
+GG ++ + L
Sbjct: 108 VIVGGLDMMKQALSL 122
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
+F + L + L+ A G +KP+ IQ + P +QGR
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGR 45
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 42.3 bits (95), Expect = 2e-04
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI------DTSIREC---QALILXPTRELAQQIQKVVIA 408
V+A AQ+G+GKTA F + ++ + +S E QA+ + PTRELA QI
Sbjct: 751 VMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARK 810
Query: 409 LGDHLNAKCHACIGGTNVREDIRQL 483
+ C GG +V +RQL
Sbjct: 811 FAHGTMLRPVVCYGGVSVSHQLRQL 835
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Frame = +1
Query: 220 ATRNNALHPRTRVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALILXPTRELA 381
A+ N ++ VI QA++GTGKT +F++ +++++ D + R + L++ PTRELA
Sbjct: 101 ASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELA 160
Query: 382 QQIQKVVIALGDHLNAKC 435
+Q+ L +L C
Sbjct: 161 KQVGNEFENLKSNLEVYC 178
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 41.1 bits (92), Expect = 5e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 352 LILXPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
L+L PTRELAQQ+Q+V ++G H + GG IR+L
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIREL 179
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFS----ISILQQIDTSIRECQ-ALILXPTRELAQQIQKVVIALGDH 420
+I A++G+GKTA F + I+ Q + + + LI PTREL QQI G
Sbjct: 557 IIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKA 616
Query: 421 LNAKCHACIGGTNVREDIRQL 483
N A GG N E + L
Sbjct: 617 YNIHVVAVFGGGNKYEQSKAL 637
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 421 LNAKCHACIGGTNVREDIRQL 483
++ KCHACIGGTNVRED +L
Sbjct: 1 MHVKCHACIGGTNVREDRMKL 21
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI---DTSIRECQALILXPTRELAQQ 387
V A A +GTGKTA F + IL+++ T + L++ PTRELA Q
Sbjct: 50 VCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 37.1 bits (82), Expect = 0.008
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT--------------SIRECQ-----ALILXPTREL 378
+I A++G+GKT F I I+Q I+ S E Q ALI+ PTREL
Sbjct: 171 IIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTREL 230
Query: 379 AQQIQKVVIALGDHLNAKCHACIGG 453
A Q++ ++ + + K A +GG
Sbjct: 231 ALQVKDHLVKAAKYTSVKVAAIVGG 255
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 337 RECQALILXPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 483
R+ A+++ PTRELA QI + N +C GGT + E I +L
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAEL 191
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 35.5 bits (78), Expect = 0.023
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQIDTS---------IRECQALILXPTRELAQQIQKV 399
R VI AQ+G+GKT + ++ ++ ++ +A I+ P RELA QI K
Sbjct: 415 RHHVICAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKT 474
Query: 400 VIALGDHLNAKCHACIGG 453
+L H + IGG
Sbjct: 475 AKSLCHHARFRSVGLIGG 492
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 33.9 bits (74), Expect = 0.071
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQ---QIDTSIRE-CQALILXPTRELAQQIQKVVIALGDHL 423
++ A++G+GKT F + +++ ++ R +I+ PTREL+ Q V L H
Sbjct: 612 LLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHH 671
Query: 424 NAKCHACIGGTNVREDIRQL 483
N +GG N + + +L
Sbjct: 672 NFTYGIIMGGVNRKAEAERL 691
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILXPTRELAQQI 390
+I A++G+GKT +S+ + + T ALIL PTREL QQ+
Sbjct: 112 IIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 119 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR-VLSLKPSQELEKLL 295
D + +E+F D+NL EL + F+ P+ IQ + + + GR ++ L + + L
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 296 LSL 304
SL
Sbjct: 126 YSL 128
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 14 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 184
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 185 YAYGFEKPSA 214
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELA-QQIQKVVIALGD 417
++ ++++GTGK+ F +L + R +I+ PTRELA Q + +V LGD
Sbjct: 200 LLIKSETGTGKSLVF---LLPSVQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD 251
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D++L E LL + G++KP+ +Q+ I P ++G+
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGK 912
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI 324
++A AQ+G+GKTA F I IL +I
Sbjct: 915 LMACAQTGSGKTAAFLIPILSRI 937
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 181
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 319 QIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKCHACI 447
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 435 AFSIQVITKSYHHLLNLLGQLSCGXQDQSLTFTNACID 322
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGNRD---KEEKANATEQCAD 235
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 38 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 169
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 38 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 169
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 190 GVYASQQFFFEVHVIEGFDNLIPVGVKC 107
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_44917| Best HMM Match : DUF156 (HMM E-Value=3)
Length = 1198
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 133 CRNLR*HEPQRRIVERHIRLWF*KTFCNPATRNNALHPRTRVIAQAQSGTGKTATFSISI 312
CR + E + + R L F T C+P +H R+ V Q Q+ + +T S S+
Sbjct: 825 CRVIGETEEYKDLKARQSLLAFALTHCSPDAIEELIHSRSLVETQKQTDEPEGSTVSRSL 884
Query: 313 L 315
+
Sbjct: 885 M 885
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Frame = +2
Query: 50 NGPSKDQGSYDGPPGMDPGTLD-------TDWDQVVE 139
NGP+ D YD PP P T D T+WD ++
Sbjct: 340 NGPTSDNTDYDSPPRATP-TYDAPTRSTRTNWDPTID 375
>SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23)
Length = 960
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 189 PMVLKNLLQSSNAX*CLASKDACYRSSPVRNWKNCYFLYI 308
PM++ + S + C+A+ +A +++ +W N F YI
Sbjct: 431 PMLVLSKKNDSGSYRCIATNEAVCKNTSTSDWINVTFKYI 470
>SB_10225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.1 bits (57), Expect = 8.2
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 250 TRVIAQAQSGTGKTATFSISILQQID-TSIRECQALILXPTRELAQQIQKVVIALGDHLN 426
+++IA+A+S + FS S+ + + +S + +AL L + + ++ ALGD +
Sbjct: 3 SKIIARAKSCSSDKEMFSDSVEKHVCVSSFKYFRALHLCGSSQTSK-------ALGDTTH 55
Query: 427 AKCHA 441
AKCHA
Sbjct: 56 AKCHA 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,105,534
Number of Sequences: 59808
Number of extensions: 343535
Number of successful extensions: 1699
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1690
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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