Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30287
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 128 2e-30
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 128 2e-30
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 105 2e-23
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 105 2e-23
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 71 4e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 65 3e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 62 2e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 62 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 58 3e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 55 3e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 49 2e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 48 4e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 48 4e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 48 4e-06
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 44 8e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 43 1e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 40 0.001
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.016
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.021
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.021
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.021
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 35 0.027
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 35 0.036
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 35 0.036
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 35 0.036
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 35 0.036
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 34 0.048
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.11
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 32 0.19
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 32 0.19
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 32 0.19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 31 0.59
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 30 0.77
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 30 0.77
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 29 1.4
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 1.8
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 2.4
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 4.1
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 5.5
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 5.5
Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical pr... 27 9.5
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 9.5
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 27 9.5
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 27 9.5
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 27 9.5
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 9.5
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 27 9.5
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 9.5
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 128 bits (310), Expect = 2e-30
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL PTRELA QIQKVV+ALGD++N +C
Sbjct: 66 VIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQC 125
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTN+ EDIR+L
Sbjct: 126 HACIGGTNLGEDIRKL 141
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQR + ++ R
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKAR 64
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 128 bits (310), Expect = 2e-30
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL PTRELA QIQKVV+ALGD++N +C
Sbjct: 66 VIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQC 125
Query: 436 HACIGGTNVREDIRQL 483
HACIGGTN+ EDIR+L
Sbjct: 126 HACIGGTNLGEDIRKL 141
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 131 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
++ TFD M L+E+LLRGIYAYGFEKPSAIQQR I ++ R
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKAR 64
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 105 bits (251), Expect = 2e-23
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATFS+SILQ+ID QAL++ PTRELAQQIQKV+ ALG++LN
Sbjct: 69 VIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNI 128
Query: 436 HACIGGTNVREDIRQL 483
CIGGT+VR+D R+L
Sbjct: 129 LPCIGGTSVRDDQRKL 144
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 104 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+R I+PC G+
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGK 67
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 105 bits (251), Expect = 2e-23
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VIAQAQSGTGKTATFS+SILQ+ID QAL++ PTRELAQQIQKV+ ALG++LN
Sbjct: 69 VIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNI 128
Query: 436 HACIGGTNVREDIRQL 483
CIGGT+VR+D R+L
Sbjct: 129 LPCIGGTSVRDDQRKL 144
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 104 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+R I+PC G+
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGK 67
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 70.9 bits (166), Expect = 4e-13
Identities = 28/76 (36%), Positives = 52/76 (68%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H+ K
Sbjct: 83 ILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKV 142
Query: 436 HACIGGTNVREDIRQL 483
GGT++R+DI +L
Sbjct: 143 MVTTGGTDLRDDIMRL 158
Score = 34.3 bits (75), Expect = 0.048
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
F+D L +LL GI+ G+EKPS IQ+ I + G+
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQ 81
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
+ P + +IAQAQSGTGKTA F +++L +ID ++ Q + L PT ELA+QI +VV +G
Sbjct: 245 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 304
Query: 418 HL-NAKCHACIGGTNV 462
+ N K H I G N+
Sbjct: 305 FIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
+ P + +IAQAQSGTGKTA F +++L +ID ++ Q + L PT ELA+QI +VV +G
Sbjct: 270 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 329
Query: 418 HL-NAKCHACIGGTNV 462
+ N K H I G N+
Sbjct: 330 FIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 64.9 bits (151), Expect = 3e-11
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGD 417
+ P + +IAQAQSGTGKTA F +++L +ID ++ Q + L PT ELA+QI +VV +G
Sbjct: 654 MEPPSNLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGK 713
Query: 418 HL-NAKCHACIGGTNV 462
+ N K H I G N+
Sbjct: 714 FIDNLKIHYAIKGGNM 729
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC
Sbjct: 129 ILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 436 HACIGGTNVREDIRQL 483
+GG ++ R+L
Sbjct: 189 SVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG + KC
Sbjct: 129 ILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKC 188
Query: 436 HACIGGTNVREDIRQL 483
+GG ++ R+L
Sbjct: 189 SVIVGGRSLIHQAREL 204
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 152 MNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGRVLSLKPSQELEKLLLSL 304
M LKEELLRGIY +GFEKPSAIQ+ + PC G+ ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
Score = 47.6 bits (108), Expect = 5e-06
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 220 ATRNNALHPRTR---VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
A + +A+ P T V Q+Q+G+GKT I ILQ ID Q ++L P R +AQ+
Sbjct: 21 AIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRA 80
Query: 391 QKVVIALGDHLNAKCHACIGGTNVRED 471
+ + +LG +LN C+G E+
Sbjct: 81 HEQLKSLGRNLNVNA-TCLGFDTTAEN 106
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 54.8 bits (126), Expect = 3e-08
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT-SIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
V+A +++G+GKTA F I +LQ++ +AL++ PTRELA Q KVV LG +
Sbjct: 64 VVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 433 CHACIGGTNVRE 468
C +GG + E
Sbjct: 124 CACLVGGDQIEE 135
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 54.8 bits (126), Expect = 3e-08
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDT-SIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
V+A +++G+GKTA F I +LQ++ +AL++ PTRELA Q KVV LG +
Sbjct: 64 VVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 433 CHACIGGTNVRE 468
C +GG + E
Sbjct: 124 CACLVGGDQIEE 135
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L K
Sbjct: 81 VVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVK 140
Query: 433 CHACIGGTNVREDIRQL 483
GG +++D +L
Sbjct: 141 VAVFFGGMAIKKDEERL 157
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L K
Sbjct: 81 VVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVK 140
Query: 433 CHACIGGTNVREDIRQL 483
GG +++D +L
Sbjct: 141 VAVFFGGMAIKKDEERL 157
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHL-NAK 432
V+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +L K
Sbjct: 80 VVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVK 139
Query: 433 CHACIGGTNVREDIRQL 483
GG +++D +L
Sbjct: 140 VAVFFGGMAIKKDEERL 156
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
VI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG +
Sbjct: 84 VIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIA 143
Query: 436 HACIGGTNV 462
+GG ++
Sbjct: 144 AVIVGGVDM 152
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 113 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
D + D ++F ++ + + L G+ KPS IQQ + +QG+
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGK 82
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+
Sbjct: 62 MLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGART 120
Query: 436 HACIGGT 456
+GG+
Sbjct: 121 SVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 48.0 bits (109), Expect = 4e-06
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAKC 435
++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V + A+
Sbjct: 62 MLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGART 120
Query: 436 HACIGGT 456
+GG+
Sbjct: 121 SVYVGGS 127
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILXPTRELAQQIQKVVI 405
VI A++G+GKTA F + +L I TS+ + + A+I+ PTRELAQQI++
Sbjct: 341 VIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETN 399
Query: 406 ALGDHLNAKCHACIGGTNVRED 471
G L K + IGG + RED
Sbjct: 400 KFGKLLGIKTVSVIGGAS-RED 420
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSI---RECQALILXPTRELAQQIQKVVIALGDHLN 426
V+ ++ +G+GKT F + +++ I + + ALIL P+REL QI V+ + LN
Sbjct: 49 VVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLN 108
Query: 427 AKCHACIGGTNVREDIR 477
GG V ++I+
Sbjct: 109 LTVETVTGGQKVDKNIK 125
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 43.6 bits (98), Expect = 8e-05
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILXPTRELAQQIQKVVIALGDH 420
+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 169 IISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHS 228
Query: 421 LNAKCHACIGGTNVREDIRQL 483
L K GG + R L
Sbjct: 229 LGLKMTCLFGGASKGPQARDL 249
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 43.6 bits (98), Expect = 8e-05
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILXPTRELAQQIQKVVIALGDHLN 426
+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L +
Sbjct: 188 ICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ 247
Query: 427 AKCHACIGGTNVR 465
+ C GG +++
Sbjct: 248 LEVCLCAGGLDLK 260
Score = 32.3 bits (70), Expect = 0.19
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 211
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 212 AIQQRXIMPCIQGR 253
IQQ I + G+
Sbjct: 173 PIQQACIPVALTGK 186
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILXPTRELAQQIQKVVIALGDHL 423
V+ A++G+GKT I +L+ + + ALI+ PTRELA Q + A+G H
Sbjct: 116 VVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHH 175
Query: 424 NAKCHACIGGTNV 462
C IGG++V
Sbjct: 176 GFSCGLVIGGSDV 188
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILXPTRELAQQIQKVVIALGDH 420
VI A++G+GKT F + + + I + E A+IL PTRELA Q K
Sbjct: 344 VIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKP 403
Query: 421 LNAKCHACIGGTNVREDIRQL 483
L K GG + E I L
Sbjct: 404 LGLKVACTYGGVGISEQIADL 424
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILXPTRELA 381
A+ R V+ A++G+GKT F I ++ ++ T +R +ALI+ PTREL
Sbjct: 22 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 81
Query: 382 QQIQKVVIALGDHLNAKCHACIGG 453
QI K + AL + +GG
Sbjct: 82 IQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Frame = +1
Query: 235 ALHPRTRVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILXPTRELA 381
A+ R V+ A++G+GKT F I ++ ++ T +R +ALI+ PTREL
Sbjct: 189 AVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELV 248
Query: 382 QQIQKVVIALGDHLNAKCHACIGG 453
QI K + AL + +GG
Sbjct: 249 IQIMKHINALISTTQLIATSIVGG 272
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.9 bits (79), Expect = 0.016
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILXPTRELAQQIQKVV 402
V+ QA++ GKTA F + I+ +I +T + Q ALIL PTRELA QI + +
Sbjct: 421 VLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.1 bits (77), Expect = 0.027
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +1
Query: 256 VIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILXPTRELAQQIQKVVIALGDHL 423
V+A A++G+GKT F +I +L +++ +I+ PTREL+ Q V+ L +
Sbjct: 108 VLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGS 167
Query: 424 NAKCHACIGGTN 459
N +GG+N
Sbjct: 168 NLTYGLVMGGSN 179
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 34.7 bits (76), Expect = 0.036
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQI------------DTSIRECQ---ALILXPTRELAQQIQKVV 402
AQ+G+GKTA F + I+Q I T+ R AL+L PTRELA QI K
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 403 IALGDHLNAKCHACIGG-TNVREDIRQL 483
N + GG N R+ + +L
Sbjct: 243 TKFSYKSNIQTAILYGGRENYRDQVNRL 270
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 34.7 bits (76), Expect = 0.036
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQI------------DTSIRECQ---ALILXPTRELAQQIQKVV 402
AQ+G+GKTA F + I+Q I T+ R AL+L PTRELA QI K
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 403 IALGDHLNAKCHACIGG-TNVREDIRQL 483
N + GG N R+ + +L
Sbjct: 227 TKFSYKSNIQTAILYGGRENYRDQVNRL 254
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 34.7 bits (76), Expect = 0.036
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Frame = +1
Query: 268 AQSGTGKTATFSISILQQI------------DTSIRECQ---ALILXPTRELAQQIQKVV 402
AQ+G+GKTA F + I+Q I T+ R AL+L PTRELA QI K
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 403 IALGDHLNAKCHACIGG-TNVREDIRQL 483
N + GG N R+ + +L
Sbjct: 224 TKFSYKSNIQTAILYGGRENYRDQVNRL 251
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 34.7 bits (76), Expect = 0.036
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISIL-----QQIDTSIRECQA---LILXPTRELAQQIQKVVIAL 411
+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI ++I +
Sbjct: 230 MIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEM 289
Query: 412 GDHL------NAKCHACIGGTNVREDIRQL 483
D L + CIGG + E + +
Sbjct: 290 FDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 34.3 bits (75), Expect = 0.048
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)
Frame = +1
Query: 259 IAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILXPTRELAQQIQ 393
I +Q+G+GKT F + L ID + + + L+L PTRELAQQI+
Sbjct: 125 IGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Frame = +1
Query: 247 RTRVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILXPTRELAQQ 387
R V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 163 RRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 9/54 (16%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILXPTRELAQQI 390
++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 9/54 (16%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILXPTRELAQQI 390
++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 338 ILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.19
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.19
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.19
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Frame = +1
Query: 238 LHPRTRVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILXPTRELAQQI 390
+H ++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 30.7 bits (66), Expect = 0.59
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFS----ISILQQIDTSIRECQ-ALILXPTRELAQQI 390
V+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 305 VLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 30.7 bits (66), Expect = 0.59
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 101 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRXIMPCIQGR 253
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ +
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENK 127
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 30.3 bits (65), Expect = 0.77
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILXPTRELAQQIQKVVI 405
V+A A +G+GKT F I + ++ D + + + LI+ PTREL Q
Sbjct: 776 VVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTAR 835
Query: 406 ALGDHLNAKCHACIGGTNVREDIRQL 483
L KC GG + +++ L
Sbjct: 836 QLTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 30.3 bits (65), Expect = 0.77
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILXPTRELAQQIQKVVI 405
V+A A +G+GKT F I + ++ D + + + LI+ PTREL Q
Sbjct: 776 VVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTAR 835
Query: 406 ALGDHLNAKCHACIGGTNVREDIRQL 483
L KC GG + +++ L
Sbjct: 836 QLTYETGLKCGLAFGGYSRNANVQHL 861
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 98 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNK 3
P P + + D FWN L+N LTF Q +K
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDK 369
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1340 VIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 256 VIAQAQSGTGKTATFSISILQQIDTSIREC 345
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 11 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 151
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 214 NPATRNN-ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
N T++ AL R R + T S+ +L++ + IRE Q +L ELA++
Sbjct: 1013 NALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK- 1071
Query: 391 QKVVIALGDHLNAK 432
QK + A + + K
Sbjct: 1072 QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 214 NPATRNN-ALHPRTRVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXPTRELAQQI 390
N T++ AL R R + T S+ +L++ + IRE Q +L ELA++
Sbjct: 1013 NALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK- 1071
Query: 391 QKVVIALGDHLNAK 432
QK + A + + K
Sbjct: 1072 QKAIDAQEEEIQTK 1085
>Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical
protein ZK1321.2f protein.
Length = 435
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 133 LLEEFWIAEGYEKPKEVMMPNNKTQR 158
>Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical
protein ZK1321.2e protein.
Length = 448
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 146 LLEEFWIAEGYEKPKEVMMPNNKTQR 171
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 199 LLEEFWIAEGYEKPKEVMMPNNKTQR 224
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 234 LLEEFWIAEGYEKPKEVMMPNNKTQR 259
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 222 LLEEFWIAEGYEKPKEVMMPNNKTQR 247
>Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical
protein ZK1321.2a protein.
Length = 481
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 234 IIXRCWIAEGFSKP*AYMPLNNSSLR 157
++ WIAEG+ KP M NN + R
Sbjct: 179 LLEEFWIAEGYEKPKEVMMPNNKTQR 204
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 310 ILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
+ Q +DT +ECQ L + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 35 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 118
P K P D SY GPPG PG T
Sbjct: 202 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 228
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 35 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 118
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 35 PEDSKNGPSKDQGSYDGPPGMDPGTLDT 118
P K P D SY GPPG PG T
Sbjct: 266 PPGPKGNPGPDGQSYQGPPG-PPGDSGT 292
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 310 ILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
+ Q +DT +ECQ L + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 68 DPSMAHFWNPLANLLTFFQTNK 3
D FWN L+N LTF Q +K
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDK 258
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 310 ILQQIDTSIRECQALILXPTRELAQQIQKVVIALGDHLNAK 432
+ Q +DT +ECQ L + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,820,583
Number of Sequences: 27780
Number of extensions: 251159
Number of successful extensions: 788
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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