Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30282
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 9e-31
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 128 4e-30
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 115 2e-26
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 115 3e-26
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 100 2e-21
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 95 3e-20
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 91 5e-19
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 91 7e-19
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 84 6e-17
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 76 2e-14
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 57 1e-08
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 55 4e-08
SB_214| Best HMM Match : Arf (HMM E-Value=0) 52 3e-07
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 45 3e-05
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 43 1e-04
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 37 0.012
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 37 0.012
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 36 0.021
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 33 0.11
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 32 0.26
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 31 0.79
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 31 0.79
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 30 1.0
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 30 1.4
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 29 2.4
SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 2.4
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 130 bits (313), Expect = 9e-31
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 435
GKTTILYKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +
Sbjct: 29 GKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
Query: 436 IYVVDSADRDRIGISKDELVHMLRE 510
IYVVDS DR+R+ SK+EL ML+E
Sbjct: 89 IYVVDSNDRERVNESKEELNKMLQE 113
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 191 SYFRGLLGAREMRILILGLDGAERRQFFINYK 286
S F L G ++MRIL++GLD A + K
Sbjct: 7 SLFTRLFGKKQMRILMVGLDAAGKTTILYKLK 38
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 128 bits (308), Expect = 4e-30
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 435
GKTTILYKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +
Sbjct: 29 GKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGL 88
Query: 436 IYVVDSADRDRIGISKDELVHMLRE 510
I+VVDS DR+R+G +++EL ML E
Sbjct: 89 IFVVDSNDRERVGEAREELNRMLNE 113
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 176 MGGLFS-YFRGLLGAREMRILILGLDGAERRQFFINYK 286
MGG+F+ F GL G +EMRIL++GLD A + K
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLK 38
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 115 bits (277), Expect = 2e-26
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAI 435
GKTTILY L++ E V TIPTIGFNVE V YKN+KF VWD+GGQ IR WR Y+ T +
Sbjct: 102 GKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGL 161
Query: 436 IYVVDSADRDRIGISKDELVHMLREK 513
I+VVDS DRDRI +K+EL +L+E+
Sbjct: 162 IFVVDSNDRDRIQEAKEELFKLLKEE 187
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 170 NKMGG-LFSYFRGLLGAREMRILILGLDGAERRQFFINYK 286
+KMG + S FR LLG E+R+L++GLD A + + K
Sbjct: 72 SKMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLK 111
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 115 bits (276), Expect = 3e-26
Identities = 51/90 (56%), Positives = 67/90 (74%)
Frame = +1
Query: 244 IGRCGKTTILYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGN 423
+ GKTTILY+L++ EVV+T+PT+GFNVE VTYKN+ F VWD+GGQ IR WR YY
Sbjct: 4 LDNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQG 63
Query: 424 TDAIIYVVDSADRDRIGISKDELVHMLREK 513
II+VVDSADR+R +++EL +L E+
Sbjct: 64 CQGIIFVVDSADRERAEEARNELHKLLAEE 93
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 99.5 bits (237), Expect = 2e-21
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 GRCGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGN 423
GR KTTILYKL++ E V T+PT+ FNVE ++ KN+ F VWD+GGQ IR WR Y+
Sbjct: 118 GRGRKTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQG 177
Query: 424 TDAIIYVVDSADRDRIGISKDELVHMLR 507
+ II+VVDSAD++RI ++EL +L+
Sbjct: 178 AEGIIFVVDSADKERIFEVREELTRVLQ 205
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 95.1 bits (226), Expect = 3e-20
Identities = 44/80 (55%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYGNTDA 432
GKTTILYKL++ E V+TIPTIGFNVE + KN+ +WD+GGQ IRP WR Y+ T+
Sbjct: 31 GKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEG 90
Query: 433 IIYVVDSADRDRIGISKDEL 492
+++VVDS+D R+ +K+EL
Sbjct: 91 LLFVVDSSDVLRMPEAKEEL 110
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 91.1 bits (216), Expect = 5e-19
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +1
Query: 310 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 489
P GFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS DR+R G +K+E
Sbjct: 496 PVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEE 555
Query: 490 LVHMLRE 510
L ML E
Sbjct: 556 LSRMLAE 562
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 90.6 bits (215), Expect = 7e-19
Identities = 39/88 (44%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 IGRCGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLGGQTSIRPYWRCYYG 420
+ + GKT+ILY+ + E V T+PT FNVE + +K ++F+VWD+GG+ RP W+ Y
Sbjct: 29 LDKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYAR 88
Query: 421 NTDAIIYVVDSADRDRIGISKDELVHML 504
TDA+IYVVDS ++ ++DEL ++L
Sbjct: 89 QTDAVIYVVDSTSAGKLEEARDELFNLL 116
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 84.2 bits (199), Expect = 6e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +1
Query: 379 GQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 510
GQTSIRPYWRCYY NTDA+IYVVDS D+DRIGISK EL+ ML E
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEE 198
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDA 432
GKTT + + G+ IPT+GFN+ +V+ N+ +VWD+GGQ R W Y +
Sbjct: 32 GKTTFVNVIASGQFSEDMIPTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNC 91
Query: 433 IIYVVDSADRDRIGISKDELVHMLREK 513
I+Y+VD+AD D++ SK+EL H L EK
Sbjct: 92 IVYMVDAADHDKLEASKNEL-HNLLEK 117
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTTIPTIGFNVEQVTYKN-LKFQVWDLGGQTSIRPYWRCYYGNTDA 432
GKTTIL L +V+ PT GFN++ V K + VWD+GGQ IRPYW+ Y+ NTD
Sbjct: 29 GKTTILKSLASEDVLHITPTQGFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDI 88
Query: 433 I 435
+
Sbjct: 89 L 89
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 63.7 bits (148), Expect = 9e-11
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 GKTTILYKLQVGEVV---TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 426
GK+ L L G+ +T T GFNV +T L +W++GG R YW + +T
Sbjct: 178 GKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADT 237
Query: 427 DAIIYVVDSADRDRIGISKDELVHML 504
++YVVDS+D DR S+D L +L
Sbjct: 238 QLLVYVVDSSDPDRFNESRDNLKSLL 263
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 355 KFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREK 513
K +WD+GGQ S+R YWR Y+ +TD +I+VVDSAD+ R+ K EL +L E+
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +1
Query: 277 KLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 426
K+++ V + GFNVE V +++LKF +WD+GG +RP WR YY NT
Sbjct: 208 KMEMRAVALGLDGAGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 54.8 bits (126), Expect = 4e-08
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1
Query: 370 DLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREK 513
D+GGQ IRP WR Y+ + +I+VVD ADRDRI ++ EL ++ ++
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDR 190
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/69 (30%), Positives = 41/69 (59%)
Frame = +1
Query: 307 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 486
+PT+ E+++ ++F +DLGG R W+ Y+ + I++++D AD +R+ SK
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 487 ELVHMLREK 513
EL +L ++
Sbjct: 65 ELDSLLADE 73
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 346 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLREK 513
KN+ F VWD+GGQ ++R ++ + + +IYVVDS D R +++ +L+ +L+EK
Sbjct: 16 KNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQR--LNEAQLLGILQEK 67
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 301 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 480
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 178 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LSLE 236
Query: 481 KDELVHMLRE 510
+DE + + E
Sbjct: 237 EDESTNRMEE 246
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 301 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGIS 480
T + T G Q YK L F+++D+GGQ S R W + + AIIY V + D + +
Sbjct: 226 TRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYD-LTLE 284
Query: 481 KDELVHMLRE 510
+DE + + E
Sbjct: 285 EDESTNRMEE 294
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 301 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 477
T + T G T+K+L F+++D+GGQ S R W C+ G T AII+ V + D + +
Sbjct: 177 TRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSAYDLV-L 234
Query: 478 SKDELVHMLRE 510
++DE ++ + E
Sbjct: 235 AEDEEMNRMME 245
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 292 EVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW 405
E +TT T+G N+ ++T ++K WDLGGQ +R W
Sbjct: 55 EKITT--TVGLNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +1
Query: 256 GKTTILYKLQVGEVV-TTIPTIG--FNVEQVTYKN---LKFQVWDLGGQTSIRPYWRCYY 417
GK+++L + G+ + PT+G F+V + K +K Q+WD GQ R YY
Sbjct: 25 GKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYY 84
Query: 418 GNTDAIIYVVDSADRD 465
NT + + D +RD
Sbjct: 85 RNTVGCLIIYDITNRD 100
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 316 IGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 462
+G V + +K Q WD GQ R + YY N DA+I V D +R
Sbjct: 48 VGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNR 96
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 310 PTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 462
PTIG F ++ V + +K Q+WD GQ R + YY N D +I D ++
Sbjct: 38 PTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNK 92
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVT-TIPTIGFNV-EQVTYKN---LKFQVWDLGGQTSIRPYWRC-YY 417
GKT + Y+L G+ T TIG + E+ N +K Q+WD GQ R C YY
Sbjct: 58 GKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCHYY 117
Query: 418 GNTDAIIYVVD 450
N +A++++ D
Sbjct: 118 RNVNAVVFMYD 128
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 36.7 bits (81), Expect = 0.012
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTT-IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYG 420
GK+++L + T I TIG F + +T K +K Q+WD GQ R YY
Sbjct: 20 GKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYR 79
Query: 421 NTDAIIYVVD 450
+ I+ + D
Sbjct: 80 SAHGIVLIYD 89
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 289 GEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 462
G +TTI + F + + + +K Q+WD GQ R YY T +I V D
Sbjct: 4 GSYITTIG-VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSA 62
Query: 463 D 465
D
Sbjct: 63 D 63
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 35.9 bits (79), Expect = 0.021
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 307 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 465
I TIG F + + K +K Q+WD GQ R YY II V D D++
Sbjct: 59 ISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQE 115
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 319 GFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 465
G + V K++K Q+WD GQ R R YY + V D + R+
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRE 181
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +1
Query: 256 GKTTILYKLQVGEVVTT-IPTIG--FNVEQV--TYKNLKFQVWDLGGQTSIRPYWRCYYG 420
GKT+ L++ + + T+G F V+ V K +K Q+WD GQ R YY
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYR 92
Query: 421 NTDAIIYVVDSADRDRIGISKD 486
I + D + + +D
Sbjct: 93 GAMGFILMYDITNEESFQAVQD 114
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 32.3 bits (70), Expect = 0.26
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 352 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 510
+KF++WD GQ YY A I V D ++D +K + + R+
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQ 122
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 31.1 bits (67), Expect = 0.60
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +1
Query: 247 GRCGKTTILY---KLQVGEVVTTIPTIGFNVE---QVTYKNLKFQVWDLGGQTSIRPYWR 408
G CGKT +L K Q EV +PT+ N +V K ++ +WD GQ
Sbjct: 5938 GACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 5995
Query: 409 CYYGNTDAII--YVVDSAD 459
Y +TD I+ + +DS D
Sbjct: 5996 LSYPDTDVILMCFSIDSPD 6014
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.1 bits (67), Expect = 0.60
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +1
Query: 316 IGFNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 465
+ F V+ +T + K +WD GQ R YY +I V D+ R+
Sbjct: 43 VDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRE 94
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 30.7 bits (66), Expect = 0.79
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +1
Query: 256 GKTTILYKLQVGEV-VTTIPTIGFNVE----QVTYKNLKFQVWDLGGQTSIRPYWRCYYG 420
GK+++L + E + + TIG QV K +K QVWD GQ R YY
Sbjct: 24 GKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERYRAITSAYYR 83
Query: 421 NTDAIIYVVD 450
+ V D
Sbjct: 84 GAVGAVLVYD 93
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 30.7 bits (66), Expect = 0.79
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 346 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 450
+++K Q+WD GQ R + YY + + +I D
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Frame = +1
Query: 247 GRCGKTTILYKLQVGEVVTT-IPTIGFNVEQVTYKN----LKFQVWDLGGQTSIRPYWRC 411
G GKTT + + GE I T+G V + + +KF VWD GQ
Sbjct: 41 GGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDG 100
Query: 412 YYGNTDAIIYVVDSADR 462
YY I + D R
Sbjct: 101 YYIQGQCAIIMFDVTSR 117
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 421 NTDAIIYVVD-SADRDRIGISKDELVHMLREKN*RTRYSL 537
N DA IYVVD SA+ R+ I EL M+ + R L
Sbjct: 126 NVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPL 165
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Frame = +1
Query: 256 GKTTILYKLQVGEVV-TTIPTIGFNVEQVTYKN------LKFQVWDLGGQTSIRPYWRCY 414
GKTT++++L + T G ++E+ K F++WD GGQ +C+
Sbjct: 563 GKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGGQEDYYATHQCF 622
Query: 415 YGNTDAIIYV 444
I V
Sbjct: 623 ISTLSLYILV 632
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +1
Query: 346 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 450
K +K Q+WD GQ YY I+ V D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYD 37
>SB_40811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 253 CGKTTILYKLQVGEVVTTIPTIGFNVEQVT-YKNLKFQVWDLG 378
C KT Y++Q G V IPT+ + V Y+NL+ DLG
Sbjct: 284 CNKTATKYRIQTGLVPKLIPTLKDKEKYVLHYRNLQLYT-DLG 325
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 337 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 450
V K KF +WD GQ + YY + A I V D
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +1
Query: 310 PTIGFNVEQVTYK-----NLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 450
PTIG + T + ++ Q+W + GQ R YY DA + + D
Sbjct: 49 PTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFD 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,785,189
Number of Sequences: 59808
Number of extensions: 348583
Number of successful extensions: 737
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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