Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30281
(636 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 157 3e-37
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 98 1e-19
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 83 7e-15
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 79 9e-14
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 77 4e-13
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 76 6e-13
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 68 2e-10
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 66 7e-10
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 66 9e-10
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 65 1e-09
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 64 2e-09
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 60 3e-08
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 60 4e-08
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 60 4e-08
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 58 1e-07
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 56 5e-07
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 56 7e-07
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 52 9e-06
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 52 1e-05
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 52 2e-05
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 51 2e-05
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 50 5e-05
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 46 8e-04
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 44 0.002
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 37 0.47
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 36 0.62
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 36 0.82
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 36 1.1
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 35 1.4
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 34 3.3
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q09164 Cluster: Cyclosporine synthetase; n=8; Fungi/Met... 33 5.8
UniRef50_Q11CI1 Cluster: Allergen V5/Tpx-1 related precursor; n=... 33 7.6
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 33 7.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 157 bits (380), Expect = 3e-37
Identities = 76/94 (80%), Positives = 79/94 (84%)
Frame = +2
Query: 2 FIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKH 181
FIG LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKH
Sbjct: 55 FIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKH 114
Query: 182 VRRIRPNLKIGTVCILLAGRHAGKRLYLLEFCPA 283
VRRIRPNLKIGTVCILLAGRHAGKR+ L+ P+
Sbjct: 115 VRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 148
Score = 146 bits (354), Expect = 4e-34
Identities = 70/86 (81%), Positives = 71/86 (82%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 138 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKK 197
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYV 507
EGDDIFATKKEKYV
Sbjct: 198 NKKCVKRTVKRKEGDDIFATKKEKYV 223
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAA 614
KK + SEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAA
Sbjct: 218 KKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAA 259
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 98.3 bits (234), Expect = 1e-19
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 130 KRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRR 189
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYV 507
DIFA KKE++V
Sbjct: 190 LKAKKDKKTGEA---DIFAAKKERFV 212
Score = 79.4 bits (187), Expect = 7e-14
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 56 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 235
VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLA
Sbjct: 65 VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124
Query: 236 GRHAGKRLYLLE 271
GRH GKR+ LL+
Sbjct: 125 GRHQGKRVVLLK 136
Score = 39.5 bits (88), Expect = 0.066
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 608
KK +EQRK DQK VD A++K I A P+ K YL+
Sbjct: 207 KKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQ 246
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 82.6 bits (195), Expect = 7e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 5.8
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/97 (42%), Positives = 55/97 (56%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGPF +N PLRR+ QRYVI T TRI + N K+P ND++F
Sbjct: 113 KRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRR 172
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYVHLSSAKPIRRQ 540
D IFA +++KY K +++Q
Sbjct: 173 QDLKTKKSV-----DKIFAEEEKKYTVSDDRKKLQKQ 204
Score = 38.3 bits (85), Expect = 0.15
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 170 FSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLE 271
F+ H RRIR ++ G V ILLAGRH KR+ L+
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLK 119
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/92 (46%), Positives = 53/92 (57%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H ND YF
Sbjct: 111 KRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHINDTYF-- 168
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYVHLSSAK 525
EG DIFA+K E+Y K
Sbjct: 169 --RRHKVKKEAKEG-DIFASKPERYTPTEQRK 197
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = +2
Query: 50 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 229
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 230 LAGRHAGKRLYLLE 271
LAG + GKR+ LL+
Sbjct: 104 LAGVNRGKRVVLLK 117
Score = 36.3 bits (80), Expect = 0.62
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 608
K +EQRK DQ VD ++KAI A+PD +L YL+
Sbjct: 186 KPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLR 225
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 76.2 bits (179), Expect = 6e-13
Identities = 40/101 (39%), Positives = 58/101 (57%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ V+ + L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 107 KRVIFLKALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF-- 164
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYVHLSSAKPIRRQSTRL 552
+ +F+T+ +KY + IR++ +L
Sbjct: 165 --RRVDLKESKTDAGKLFSTETKKY----TVSDIRKEDQKL 199
Score = 44.8 bits (101), Expect = 0.002
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +2
Query: 101 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLE 271
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKR+ L+
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Score = 36.7 bits (81), Expect = 0.47
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 510 SEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
S+ RK DQK VD + AI + PD K+L YL++
Sbjct: 190 SDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRS 223
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKH-FNDD-YF 423
+ VV + L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F D+ YF
Sbjct: 116 KRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYF 175
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +2
Query: 59 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 238
K IGG+KNGG R VP++R +YPT E +R R + ++R ++ GTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPT-EDVRRRLANRK-KPGMAKLRSSITPGTVLILLAG 111
Query: 239 RHAGKRLYLLE 271
H GKR+ L+
Sbjct: 112 AHRGKRVVFLK 122
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 66.1 bits (154), Expect = 7e-10
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 QEVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFX 426
+ VV + LP SGLLLVTGP N PLRRI Q +VI TS ++++ K+P+H ND+YF
Sbjct: 87 KRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYF- 145
Query: 427 XXXXXXXXXXXXXEGDDIFATKKEKY 504
G +IFA+ K +Y
Sbjct: 146 -----KRKSTAQKTGKNIFASGKTEY 166
Score = 39.5 bits (88), Expect = 0.066
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = +3
Query: 492 KREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL 605
K E SEQRK D KTVD ++ AI P+ K L GYL
Sbjct: 163 KTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYL 200
Score = 34.3 bits (75), Expect = 2.5
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 191 IRPNLKIGTVCILLAGRHAGKRLYLLEFCP 280
+R L GTV I+LAGRH GKR+ L+ P
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLP 96
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 65.7 bits (153), Expect = 9e-10
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 136 KRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF 193
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +2
Query: 50 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVC 223
V VK++ GEKNGG R +PLK+ + YPT++ + + +S +P S+ +R + GTV
Sbjct: 67 VTVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVL 126
Query: 224 ILLAGRHAGKRLYLLE 271
ILLAG H GKR+ L+
Sbjct: 127 ILLAGPHRGKRVVFLK 142
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 107 KRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYF 164
Score = 33.1 bits (72), Expect = 5.8
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 86 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYL 265
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKR+
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 266 LE 271
L+
Sbjct: 112 LK 113
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 105 KRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF 161
Score = 35.9 bits (79), Expect = 0.82
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 101 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLE 271
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKR+ L+
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLK 111
Score = 33.1 bits (72), Expect = 5.8
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAASDSVEP 632
+K+EI + +K DQK VD A+IKAI A P+ K G + ++P
Sbjct: 183 EKKEI--PQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKP 228
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 60.5 bits (140), Expect = 3e-08
Identities = 37/92 (40%), Positives = 50/92 (54%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGPF N P+RR+ Q YVI TST++ + + K F+D YF
Sbjct: 94 KRVVFLKQLKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF-- 150
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKYVHLSSAK 525
EG ++F T+KE +L K
Sbjct: 151 -SRDKKQKAKKTEG-ELFETEKEATKNLPEFK 180
Score = 34.3 bits (75), Expect = 2.5
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 122 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLE 271
FYP + K R S +P + ++R ++ GTV ILLAGR GKR+ L+
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLK 100
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 513 EQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAASDSVEP 632
E +K DQK VD +IKAI A PD K G + D +P
Sbjct: 178 EFKKEDQKVVDAELIKAIEAVPDLKTYLGARFSLRDGDKP 217
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV++ LPSGL++VTGP+A N P+RR+ Y+I TST++ + + K F D+YF
Sbjct: 55 KRVVMLKALPSGLVVVTGPYALNGVPVRRVNPAYIIATSTKVDVSKADVSK-FTDEYF 111
Score = 37.1 bits (82), Expect = 0.35
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 146 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLEFCPA 283
R S R S ++R +L+ G VCILLAG + GKR+ +L+ P+
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPS 65
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 375
+ VVL+ +L SGLLLVTGPF+FN PLRR+ RYVI TST +
Sbjct: 60 KRVVLLKVLKSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV 101
Score = 35.9 bits (79), Expect = 0.82
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 98 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRLYLLE 271
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKR+ LL+
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLK 66
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1
Query: 235 W*TCRQEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFND 414
W + VV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D
Sbjct: 151 WEVKEKRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDD 209
Query: 415 DYF 423
YF
Sbjct: 210 KYF 212
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/76 (38%), Positives = 44/76 (57%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 223
+ ++ K IGG KNGG R VP K+ +YP +K + R ++RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDK-KTPVPSRKNVHKPTKLRPSIKSGTIV 78
Query: 224 ILLAGRHAGKRLYLLE 271
ILLAG G R+ +L+
Sbjct: 79 ILLAGVFRGSRVVVLK 94
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 256 VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
VV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K ++ YF
Sbjct: 90 VVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-KKIDNAYF 144
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 56.0 bits (129), Expect = 7e-07
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L SGLLLVTGPF N PL+R+ YVI TST++ + NDDYF
Sbjct: 74 KRVVFLKQLKSGLLLVTGPFKINGVPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYF 130
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 50 KRVVYLKHLEDNTLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYF 106
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 381
+ VVL+ L G+LLVTGPF N PLRR+ RYVI TS ++ L
Sbjct: 55 KRVVLLKALDQGVLLVTGPFKINGVPLRRVNARYVIATSQKVDL 98
Score = 33.1 bits (72), Expect = 5.8
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 164 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRLYLLE 271
RP K +R P + GTV ILLAGR GKR+ LL+
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLK 61
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/80 (35%), Positives = 39/80 (48%)
Frame = +1
Query: 286 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 465
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYF------KRTKYFGK 63
Query: 466 EGDDIFATKKEKYVHLSSAK 525
E DIF K++Y + K
Sbjct: 64 EKKDIFEQGKQEYTLTDARK 83
Score = 39.9 bits (89), Expect = 0.050
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 492 KREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLK 608
K+E ++ RK DQKT+D AV+ +I D K+L GYL+
Sbjct: 73 KQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLR 111
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/58 (46%), Positives = 33/58 (56%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 423
+ VV + L SGLLLVTGP A N PL R+ Q VI T T++ + K KH D F
Sbjct: 25 KRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVKTSKHLTDASF 82
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 381
+ V+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 74 KRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDL 117
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = +2
Query: 47 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 214
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 215 TVCILLAGRHAGKRLYLLE 271
T+ ILLAGR GKR+ LL+
Sbjct: 62 TILILLAGRFRGKRVILLK 80
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 247 RQEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGN 387
R+ V+L + +G L+V+GP +N P+RRI RYVI TST + + +
Sbjct: 49 RRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATSTTVDISS 95
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 259 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 375
++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 93 IIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
Score = 33.5 bits (73), Expect = 4.4
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 53 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 211
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 212 GTVCILLAGRHAGKR 256
G V I+L G+H GKR
Sbjct: 77 GKVAIILTGKHMGKR 91
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 36.7 bits (81), Expect = 0.47
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 194 RPNLKIGTVCILLAGRHAGKRLYLLEFCP 280
+P +K G VCI+L GRHAGK+ ++E P
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 36.3 bits (80), Expect = 0.62
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 417
QE+V G + GL+L F S PL Q + +G +T +G LP+HFNDD
Sbjct: 41 QEIVTCGQVLKGLIL--NGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 35.9 bits (79), Expect = 0.82
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 223
+ V+K + G+KNGGT V L++ K + + + + S P KH + + N TV
Sbjct: 86 VATVIKTVSGDKNGGTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAV-CNSTPETVL 140
Query: 224 ILLAGRH 244
I++ G+H
Sbjct: 141 IIITGQH 147
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 378
+ VV + L G LL+TGP A N L R Q+ V+ TST I+
Sbjct: 148 RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTIN 190
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 253 EVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 378
+++++GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 247 RQEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 381
R+ V L G L + L GP + N PL RI +RY++ TST + L
Sbjct: 43 RRVVYLKG-LEDNIALCAGPKSINGIPLFRIDERYLLATSTVLDL 86
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 194 RPNLKIGTVCILLAGRHAGKR 256
RP+LK+GTV I++ G H GKR
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKR 73
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 77 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 208
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_Q09164 Cluster: Cyclosporine synthetase; n=8; Fungi/Metazoa
group|Rep: Cyclosporine synthetase - Tolypocladium
inflatum
Length = 15281
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 628 STESEAALRYPRSTFLSGRAPMALITASSTVF*SVLRCSDER-ISLF 491
ST E +PR FLSG+A + +T V+ +L+ S ER ++LF
Sbjct: 9842 STPGELLTDFPRPQFLSGKAGVIPVTIEGPVYEKLLKFSKERQVTLF 9888
>UniRef50_Q11CI1 Cluster: Allergen V5/Tpx-1 related precursor; n=1;
Mesorhizobium sp. BNC1|Rep: Allergen V5/Tpx-1 related
precursor - Mesorhizobium sp. (strain BNC1)
Length = 188
Score = 32.7 bits (71), Expect = 7.6
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 428 RIRS-ASNVQSNAKRVMTSLPQKKRNTFI*AAQNRSEDSRRGCDQSHRSPTRQEGAPRIP 604
R+R+ A ++ + A+R P + T AAQ +ED R +HRSP RQ+ R
Sbjct: 54 RLRAEALSLVNQARRQSGVPPLRLDPTLTAAAQAHAEDMARRGFYAHRSPERQDIGDRYQ 113
Query: 605 QSGFGL 622
+G GL
Sbjct: 114 ANGGGL 119
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 32.7 bits (71), Expect = 7.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDY 420
++ V +G G LL++G FN +I +YV+ + + NF L KH N DY
Sbjct: 58 KKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLKGLNF-LTKHTNKDY 113
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,599,212
Number of Sequences: 1657284
Number of extensions: 13359183
Number of successful extensions: 35930
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35911
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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