Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30281
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 83 6e-16
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 83 1e-15
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 83 1e-15
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 83 1e-15
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 75 2e-13
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 83.4 bits (197), Expect = 6e-16
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLEFCPAVCF*LLDLLLSI 319
+ I+L GRH GKR+ L+ + + DL SI
Sbjct: 149 ILIILTGRHRGKRVVFLKQLASGLLLVTDLWSSI 182
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVT ++ PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTDLWSSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 28 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 87
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 88 ILIILTGRHRGKRVVFLK 105
Score = 36.7 bits (81), Expect = 0.069
Identities = 28/85 (32%), Positives = 36/85 (42%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP + + + K+PKH D YF
Sbjct: 99 KRVVFLKQLASGLLLVTGPLVSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYF-- 156
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 157 -KKKKLRKPRHQEG-EIFDTEKEKY 179
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRRQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.6 bits (195), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGKRLYLLE 271
+ I+L GRH GKR+ L+
Sbjct: 149 ILIILTGRHRGKRVVFLK 166
Score = 74.5 bits (175), Expect = 3e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +1
Query: 250 QEVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXX 429
+ VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 160 KRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF-- 217
Query: 430 XXXXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 218 -KKKKLRKPRHQEG-EIFDTEKEKY 240
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 236 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 273
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGT 217
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 218 VCILLAGRHAGK 253
+ I+L GR GK
Sbjct: 149 ILIILTGRRRGK 160
Score = 74.1 bits (174), Expect = 4e-13
Identities = 41/83 (49%), Positives = 49/83 (59%)
Frame = +1
Query: 256 VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXX 435
VV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 163 VVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---K 219
Query: 436 XXXXXXXXXXEGDDIFATKKEKY 504
EG +IF T+KEKY
Sbjct: 220 KKKLRKPRHQEG-EIFDTEKEKY 241
Score = 33.1 bits (72), Expect = 0.85
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KKREIRSSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKA 611
+K + +EQRK DQK VD ++ I A P L+GYL++
Sbjct: 237 EKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRS 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,805,441
Number of Sequences: 237096
Number of extensions: 2098321
Number of successful extensions: 4529
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4515
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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