Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30280
(372 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 138 1e-33
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 7e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 132 1e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 117 4e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 77 5e-15
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 67 4e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 4e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.005
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.056
SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.17
SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.52
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.91
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 2.1
SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 27 3.7
SB_48536| Best HMM Match : EPSP_synthase (HMM E-Value=8.2e-06) 27 4.9
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 27 4.9
SB_57167| Best HMM Match : Ribosomal_MRP8 (HMM E-Value=3) 27 6.4
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 27 6.4
SB_53255| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_8303| Best HMM Match : START (HMM E-Value=0.0093) 26 8.5
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 138 bits (334), Expect = 1e-33
Identities = 67/87 (77%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM--DKAQ 176
TLSSSTQASIEIDSLFEGIDFYTSITRARFEELN DLF+ T EPVE+++RD+K+ K
Sbjct: 273 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKES 332
Query: 177 IHDIVLVGGSTRIPKVQKLLQDFFNGR 257
IHDIVLVGGSTRIPK+QK+LQ+ F G+
Sbjct: 333 IHDIVLVGGSTRIPKIQKMLQELFGGK 359
Score = 49.6 bits (113), Expect = 8e-07
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLD 370
KELNKSINPDE ILHGDK + V+DLLLLD
Sbjct: 359 KELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLD 397
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 136 bits (328), Expect = 7e-33
Identities = 63/86 (73%), Positives = 80/86 (93%), Gaps = 1/86 (1%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD-KAQI 179
TLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA LF+ T+EPVEK+++D+K++ K +I
Sbjct: 366 TLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKI 425
Query: 180 HDIVLVGGSTRIPKVQKLLQDFFNGR 257
+IV+VGGSTRIPK+Q LLQ+FFNG+
Sbjct: 426 DEIVMVGGSTRIPKIQSLLQNFFNGK 451
Score = 52.4 bits (120), Expect = 1e-07
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLD 370
KELNKSINPDE ILHGDKSE QDLLLLD
Sbjct: 451 KELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLD 489
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 132 bits (318), Expect = 1e-31
Identities = 58/86 (67%), Positives = 77/86 (89%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 182
TLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +DLF S ++PV K+L DAK K+ IH
Sbjct: 274 TLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIH 333
Query: 183 DIVLVGGSTRIPKVQKLLQDFFNGRS 260
++VLVGGSTR+PK+QK+L+++F+G+S
Sbjct: 334 EVVLVGGSTRVPKIQKMLEEYFSGKS 359
Score = 45.6 bits (103), Expect = 1e-05
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2
Query: 254 KELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLD 370
K LNKSINPDE IL GDKS+EV+D+LL+D
Sbjct: 358 KSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVD 396
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 117 bits (281), Expect = 4e-27
Identities = 54/84 (64%), Positives = 70/84 (83%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS+ QA +EI+S FEG DF +TRARFEELNA LF+ST++PV+K L DA + K++IH+
Sbjct: 971 LSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHE 1030
Query: 186 IVLVGGSTRIPKVQKLLQDFFNGR 257
IVLVGGSTRIPKVQ+L++DFF G+
Sbjct: 1031 IVLVGGSTRIPKVQQLVKDFFEGK 1054
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 77.0 bits (181), Expect = 5e-15
Identities = 32/88 (36%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Frame = +3
Query: 3 TLSSSTQASIEIDSLFEG---IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKA 173
T ++ + + SL EG + F +I+R FE +N DLF+ ++P+ + L + ++ K
Sbjct: 303 TRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKE 362
Query: 174 QIHDIVLVGGSTRIPKVQKLLQDFFNGR 257
++ ++VLVGGSTR+PK+++L+Q+FF+G+
Sbjct: 363 EVDEVVLVGGSTRVPKIRQLIQEFFDGK 390
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +3
Query: 75 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 248
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 110
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 67.3 bits (157), Expect = 4e-12
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = +3
Query: 75 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 248
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF 165
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 65.7 bits (153), Expect = 1e-11
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 185
LS++ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M I
Sbjct: 258 LSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDS 317
Query: 186 IVLVGGSTRIPKVQKLL 236
+VLVGG R+PKVQ L
Sbjct: 318 VVLVGGGIRVPKVQDAL 334
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 37.1 bits (82), Expect = 0.005
Identities = 13/32 (40%), Positives = 26/32 (81%)
Frame = +3
Query: 162 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGR 257
+ ++ + ++LVGG+TR PK+Q+LL+++F G+
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGK 66
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 33.5 bits (73), Expect = 0.056
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +3
Query: 9 SSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDI 188
+++++ I I+ E D + + RA+FEEL ADL + P+ +L A+ K + ++
Sbjct: 336 ANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL--AQSGKYSVKNV 393
Query: 189 V 191
V
Sbjct: 394 V 394
>SB_30598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 31.9 bits (69), Expect = 0.17
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +3
Query: 81 RARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP-----KVQKLLQDF 245
+ +E+L+ADL + P+ +L+D D I L+ + I KVQ+LL
Sbjct: 390 QTEWEDLSADLLPLVLNPIISALQDDDDDVRAIAASALLPIAESIVQLAPNKVQELLMTL 449
Query: 246 FNGRSSTNLLTLTRP*LMVQLSRLLSCTVTSL 341
+N + LT + +M+ L+ +L+C S+
Sbjct: 450 WNTLVELDDLTASTNSIMLLLAGILACPSVSM 481
>SB_56121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 30.3 bits (65), Expect = 0.52
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++R L ++PRW + KST+L+ V P S R RS + SL
Sbjct: 221 RSSPPVASLDPGVRQEYRPLHMLPRWTLVYGKSTVLFTSCLVGPWCSARVRSPPPVASLD 280
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 281 PGVRQEYGP 289
Score = 29.5 bits (63), Expect = 0.91
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++ L ++PRW + KST+L+ V P S R RSS + SL
Sbjct: 371 RSSPPVASLDPGVRQEYGPLHLLPRWTLVYGKSTVLFTSCLVGPWCSARVRSSPPVASLD 430
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 431 PGVRQEYGP 439
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 29.9 bits (64), Expect = 0.69
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 174 QIHDIVLVGGSTRIPKVQKLLQDFFNGRSSTNL 272
+I + +VGGSTRIP ++ ++++ F T +
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVFGKELMTTM 38
>SB_22339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 29.5 bits (63), Expect = 0.91
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 94 RS*TPICSGLPW--SQWRSLSVMPRWIRL--KSTILY--WWVAPLVSPRCRSSCKI-SLM 252
RS P+ S P ++ L ++PRW + KST+L+ V P S R RSS + SL
Sbjct: 103 RSSPPVASLDPGVRQEYGPLHLLPRWTLVYGKSTVLFTSCLVGPWCSARVRSSPPVASLD 162
Query: 253 EGAQQIY*P 279
G +Q Y P
Sbjct: 163 PGVRQEYGP 171
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 36 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 155
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_8228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 69 TSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQ 239
T ++ARF++ DL T++P+ ++++ D + +++ G R+ + L+Q
Sbjct: 176 TEHSKARFKQQLTDLVIHTLQPIRENIQSLSKDPGLVSNVLETGAEKARLLAEETLVQ 233
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 6 LSSSTQASIEIDSLFEGIDFYTSITR 83
LS+ A+ +DSL EGIDF ++R
Sbjct: 240 LSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_48536| Best HMM Match : EPSP_synthase (HMM E-Value=8.2e-06)
Length = 231
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -2
Query: 257 PSIKEILQELLHLGDTSGATHQYNIVDLSLIHLGIT 150
P +KE+ ++++ D S A++ Y+I+ LS I +T
Sbjct: 130 PFVKEVAKKIVVESDWSSASYFYSIIALSNIGSSVT 165
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 182 RYCTGGWLHSYPQGAEAPARFL 247
RYC G LH PQ + PA L
Sbjct: 204 RYCIKGPLHRLPQAVQEPATIL 225
>SB_57167| Best HMM Match : Ribosomal_MRP8 (HMM E-Value=3)
Length = 698
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 136 WRSLSVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLMEGAQQIY 273
W + V P W+ + T LY +SP+ K+S +QQ+Y
Sbjct: 237 WLDVFVTPDWLDVFYTSLYNQRLGYLSPKFEKLVKLSGTHLSQQVY 282
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 26.6 bits (56), Expect = 6.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 370 IKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLPLK 245
I+QQQ LRLVT Q + ++ + L ++ FV LL K
Sbjct: 16 IEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAK 57
>SB_53255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 216 PKVQKLLQDFFNGRS 260
PK +LLQDFF+G S
Sbjct: 229 PKASRLLQDFFSGMS 243
>SB_8303| Best HMM Match : START (HMM E-Value=0.0093)
Length = 522
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 261 SSFH*RNLAGASAPWGYEWSHPPVQYRGFE 172
SS H R + AP +WSHP V + GFE
Sbjct: 188 SSGHARCVTRQQAPRVCQWSHPKV-FAGFE 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,193,046
Number of Sequences: 59808
Number of extensions: 249905
Number of successful extensions: 3025
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3023
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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