Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30274
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.44 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.3  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   5.4  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 422 VTLSALSCAFIVTVSLSPAHLRIFDMLP 339
           V L  L+C  +V   ++ AH +I  ++P
Sbjct: 190 VVLPLLACGVMVVTHITMAHFKIIQVVP 217


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +2

Query: 158 LKKVLEAIKDLLTQATFDC 214
           LK+  + ++ +LTQ++F+C
Sbjct: 67  LKRFYKVVEKILTQSSFEC 85


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 453 FLLIWALKNKCDIVSII 403
           F   WA  N C++++I+
Sbjct: 326 FFTFWAFSNACEVMAIV 342


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 453 FLLIWALKNKCDIVSII 403
           F   WA  N C++++I+
Sbjct: 326 FFTFWAFSNACEVMAIV 342


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 341 AACQRFSNVLEIRIQLQ*KHRIMLTMSHLFLRAQI 445
           AA   + N   +    Q  HR+M+T    F RA +
Sbjct: 143 AAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASV 177


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +1

Query: 328 GMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQ 447
           G N  S   +++    K + T K Q   DN+      PNQ
Sbjct: 99  GSNDNSWESLIEVT--KTSETSKLQQLVDNIEHKLSDPNQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,481
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)