Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30274
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   2.2  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    23   5.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +1

Query: 259 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 411
           ++ S  L  + F  YRCDR++S   + G    +L  +   +++ + ++D +
Sbjct: 119 NIPSALLFNNNFSVYRCDRSLSGSSSRGG-GVLLAVSNAYESIELPSRDRS 168


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 14/58 (24%), Positives = 31/58 (53%)
 Frame = +1

Query: 280 RADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEK 453
           +++GFD Y     +++G+ +     +L+  G+  + T++   N D  TF   SP++ +
Sbjct: 42  KSEGFDDYM----LALGVGM-----VLRKLGNSISPTVELVKNGDEYTFNTLSPSRTR 90


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 268 SLTLRADGFDKYRCDRN 318
           ++ L +D ++ YRCDR+
Sbjct: 50  NMVLDSDSYNIYRCDRS 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,609
Number of Sequences: 2352
Number of extensions: 7896
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)